FFCP PHASE1:Hg19::chr4:55098129..55098159,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!8.85e-34!180;CL:0000057!2.72e-24!75;CL:0000680!4.70e-15!57;CL:0000056!4.70e-15!57;CL:0000355!4.70e-15!57;CL:0000187!8.18e-14!54;CL:0002620!3.03e-12!23;CL:0000393!7.97e-12!60;CL:0000211!7.97e-12!60;CL:0000183!2.81e-11!59;CL:0000192!1.70e-10!42;CL:0000514!1.70e-10!42;CL:0000359!5.66e-09!32;CL:0000048!7.68e-09!430;CL:0002334!2.85e-08!12;CL:0000723!4.58e-08!436;CL:0002494!7.48e-08!16;CL:0000034!1.06e-07!444 | |ontology_enrichment_celltype=CL:0000055!8.85e-34!180;CL:0000057!2.72e-24!75;CL:0000680!4.70e-15!57;CL:0000056!4.70e-15!57;CL:0000355!4.70e-15!57;CL:0000187!8.18e-14!54;CL:0002620!3.03e-12!23;CL:0000393!7.97e-12!60;CL:0000211!7.97e-12!60;CL:0000183!2.81e-11!59;CL:0000192!1.70e-10!42;CL:0000514!1.70e-10!42;CL:0000359!5.66e-09!32;CL:0000048!7.68e-09!430;CL:0002334!2.85e-08!12;CL:0000723!4.58e-08!436;CL:0002494!7.48e-08!16;CL:0000034!1.06e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.06e-15;23!CL:0000057;1.52e-12;73!CL:0002494;2.76e-11;16!CL:0002320;1.36e-09;188!CL:0000359;1.66e-09;32!CL:0000192;6.61e-09;43!CL:0002334;8.38e-09;12!CL:0000048;1.15e-07;58!CL:0000134;2.75e-07;55!CL:0002556;6.43e-07;6 | |ontology_enrichment_celltype_v019=CL:0002620;2.06e-15;23!CL:0000057;1.52e-12;73!CL:0002494;2.76e-11;16!CL:0002320;1.36e-09;188!CL:0000359;1.66e-09;32!CL:0000192;6.61e-09;43!CL:0002334;8.38e-09;12!CL:0000048;1.15e-07;58!CL:0000134;2.75e-07;55!CL:0002556;6.43e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.50e-33,76;CL:0000048,7.54e-22,427;CL:0000723,5.81e-21,433;CL:0000034,8.05e-20,441;CL:0002620,3.07e-15,23;CL:0002320,2.10e-13,361;CL:0000134,6.85e-12,354;CL:0002494,1.57e-11,16;CL:0000680,1.88e-11,58;CL:0000056,1.88e-11,58;CL:0000355,1.88e-11,58;CL:0000192,4.54e-11,43;CL:0000514,4.54e-11,43;CL:0000187,1.25e-10,55;CL:0000359,3.94e-10,32;CL:0000219,9.67e-09,386;CL:0000393,9.94e-09,61;CL:0000211,9.94e-09,61;CL:0002334,1.22e-08,12;CL:0002556,9.33e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;6.61e-09;43 | |ontology_enrichment_development_v019=CL:0000514;6.61e-09;43 | ||
|ontology_enrichment_disease=DOID:2394!1.28e-07!14 | |ontology_enrichment_disease=DOID:2394!1.28e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;1.28e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,9.63e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.64e-17!83;UBERON:0002329!5.64e-17!83;UBERON:0003077!5.64e-17!83;UBERON:0003059!5.64e-17!83;UBERON:0007282!5.64e-17!83;UBERON:0009618!5.64e-17!83;UBERON:0007285!5.64e-17!83;UBERON:0002385!2.51e-14!63;UBERON:0001015!2.51e-14!63;UBERON:0000383!2.51e-14!63;UBERON:0001134!2.98e-14!61;UBERON:0002036!2.98e-14!61;UBERON:0003082!2.98e-14!61;UBERON:0004290!6.78e-14!70;UBERON:0000475!1.85e-13!365;UBERON:0000486!8.14e-12!82;UBERON:0003102!2.83e-11!95;UBERON:0000948!3.00e-09!24;UBERON:0005498!3.00e-09!24;UBERON:0004140!3.00e-09!24;UBERON:0009881!3.00e-09!24;UBERON:0004141!3.00e-09!24;UBERON:0003084!3.00e-09!24;UBERON:0007005!3.00e-09!24;UBERON:0004139!3.00e-09!24;UBERON:0004291!3.00e-09!24;UBERON:0005256!1.12e-08!143;UBERON:0002100!2.18e-08!216;UBERON:0002199!1.32e-07!45;UBERON:0002416!1.32e-07!45;UBERON:0004872!1.63e-07!84;UBERON:0000481!2.23e-07!347;UBERON:0007100!2.36e-07!27;UBERON:0004457!2.76e-07!12;UBERON:0000042!2.76e-07!12 | |ontology_enrichment_uberon=UBERON:0000914!5.64e-17!83;UBERON:0002329!5.64e-17!83;UBERON:0003077!5.64e-17!83;UBERON:0003059!5.64e-17!83;UBERON:0007282!5.64e-17!83;UBERON:0009618!5.64e-17!83;UBERON:0007285!5.64e-17!83;UBERON:0002385!2.51e-14!63;UBERON:0001015!2.51e-14!63;UBERON:0000383!2.51e-14!63;UBERON:0001134!2.98e-14!61;UBERON:0002036!2.98e-14!61;UBERON:0003082!2.98e-14!61;UBERON:0004290!6.78e-14!70;UBERON:0000475!1.85e-13!365;UBERON:0000486!8.14e-12!82;UBERON:0003102!2.83e-11!95;UBERON:0000948!3.00e-09!24;UBERON:0005498!3.00e-09!24;UBERON:0004140!3.00e-09!24;UBERON:0009881!3.00e-09!24;UBERON:0004141!3.00e-09!24;UBERON:0003084!3.00e-09!24;UBERON:0007005!3.00e-09!24;UBERON:0004139!3.00e-09!24;UBERON:0004291!3.00e-09!24;UBERON:0005256!1.12e-08!143;UBERON:0002100!2.18e-08!216;UBERON:0002199!1.32e-07!45;UBERON:0002416!1.32e-07!45;UBERON:0004872!1.63e-07!84;UBERON:0000481!2.23e-07!347;UBERON:0007100!2.36e-07!27;UBERON:0004457!2.76e-07!12;UBERON:0000042!2.76e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.95e-09;9!UBERON:0000042;2.95e-09;9!UBERON:0004573;3.35e-09;33!UBERON:0004571;3.35e-09;33!UBERON:0003688;8.75e-09;6!UBERON:0002358;8.75e-09;6!UBERON:0003684;8.75e-09;6!UBERON:0001178;8.75e-09;6!UBERON:0002384;9.71e-09;198!UBERON:0000948;2.46e-08;22!UBERON:0000075;9.94e-08;16!UBERON:0001637;3.61e-07;42!UBERON:0003509;3.61e-07;42!UBERON:0004572;3.61e-07;42!UBERON:0002199;4.88e-07;46!UBERON:0002416;4.88e-07;46!UBERON:0001758;6.43e-07;6!UBERON:0003672;6.43e-07;6!UBERON:0000992;7.37e-07;13!UBERON:0007100;7.67e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.95e-09;9!UBERON:0000042;2.95e-09;9!UBERON:0004573;3.35e-09;33!UBERON:0004571;3.35e-09;33!UBERON:0003688;8.75e-09;6!UBERON:0002358;8.75e-09;6!UBERON:0003684;8.75e-09;6!UBERON:0001178;8.75e-09;6!UBERON:0002384;9.71e-09;198!UBERON:0000948;2.46e-08;22!UBERON:0000075;9.94e-08;16!UBERON:0001637;3.61e-07;42!UBERON:0003509;3.61e-07;42!UBERON:0004572;3.61e-07;42!UBERON:0002199;4.88e-07;46!UBERON:0002416;4.88e-07;46!UBERON:0001758;6.43e-07;6!UBERON:0003672;6.43e-07;6!UBERON:0000992;7.37e-07;13!UBERON:0007100;7.67e-07;25 | ||
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| ||
|short_description=p@chr4:55098129..55098159,+ | |short_description=p@chr4:55098129..55098159,+ | ||
}} | }} |
Revision as of 03:59, 17 November 2012
Short description: | p@chr4:55098129..55098159, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:55098129..55098159, + |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.50e-33 | 76 |
multi fate stem cell | 7.54e-22 | 427 |
somatic stem cell | 5.81e-21 | 433 |
stem cell | 8.05e-20 | 441 |
skin fibroblast | 3.07e-15 | 23 |
connective tissue cell | 2.10e-13 | 361 |
mesenchymal cell | 6.85e-12 | 354 |
cardiocyte | 1.57e-11 | 16 |
muscle precursor cell | 1.88e-11 | 58 |
myoblast | 1.88e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.88e-11 | 58 |
smooth muscle cell | 4.54e-11 | 43 |
smooth muscle myoblast | 4.54e-11 | 43 |
muscle cell | 1.25e-10 | 55 |
vascular associated smooth muscle cell | 3.94e-10 | 32 |
motile cell | 9.67e-09 | 386 |
electrically responsive cell | 9.94e-09 | 61 |
electrically active cell | 9.94e-09 | 61 |
preadipocyte | 1.22e-08 | 12 |
fibroblast of periodontium | 9.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.63e-10 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.