FFCP PHASE1:Hg19::chr17:46806067..46806097,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!3.75e-16!254 | |ontology_enrichment_celltype=CL:0000066!3.75e-16!254 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.57e-08;10!CL:0000244;4.96e-08;4!CL:0000731;4.96e-08;4!CL:0002567;4.46e-07;3 | |ontology_enrichment_celltype_v019=CL:0000148;1.57e-08;10!CL:0000244;4.96e-08;4!CL:0000731;4.96e-08;4!CL:0002567;4.46e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.21e-15,253;CL:0000148,1.41e-08,10;CL:0000541,1.41e-08,10;CL:0000244,6.04e-08,4;CL:0000731,6.04e-08,4;CL:0002567,4.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.62e-09;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.62e-09;29 | ||
|ontology_enrichment_disease=DOID:0050687!8.44e-47!143;DOID:14566!6.93e-46!239;DOID:162!2.56e-45!235;DOID:305!1.60e-28!106;DOID:1115!3.91e-12!20;DOID:299!2.99e-11!25;DOID:0050686!3.00e-11!137;DOID:3095!1.38e-07!22;DOID:2994!1.38e-07!22;DOID:3119!9.00e-07!14 | |ontology_enrichment_disease=DOID:0050687!8.44e-47!143;DOID:14566!6.93e-46!239;DOID:162!2.56e-45!235;DOID:305!1.60e-28!106;DOID:1115!3.91e-12!20;DOID:299!2.99e-11!25;DOID:0050686!3.00e-11!137;DOID:3095!1.38e-07!22;DOID:2994!1.38e-07!22;DOID:3119!9.00e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1115;4.84e-10;20!DOID:3095;6.73e-09;22!DOID:2994;6.73e-09;22!DOID:0050687;1.07e-08;143!DOID:171;1.24e-08;10!DOID:299;1.99e-08;25!DOID:3119;2.30e-08;14 | |ontology_enrichment_disease_v019=DOID:1115;4.84e-10;20!DOID:3095;6.73e-09;22!DOID:2994;6.73e-09;22!DOID:0050687;1.07e-08;143!DOID:171;1.24e-08;10!DOID:299;1.99e-08;25!DOID:3119;2.30e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.97e-36,143;DOID:14566,5.86e-33,239;DOID:162,6.81e-32,235;DOID:305,1.45e-19,106;DOID:1115,4.28e-10,20;DOID:3095,7.45e-09,22;DOID:2994,7.45e-09,22;DOID:0050686,8.28e-09,137;DOID:171,1.30e-08,10;DOID:299,1.71e-08,25;DOID:3119,1.88e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.56e-10!9;UBERON:0004921!3.50e-09!129;UBERON:0004185!3.50e-09!129;UBERON:0001046!6.68e-09!19;UBERON:0005409!1.80e-08!35;UBERON:0000160!1.20e-07!27;UBERON:0005910!1.58e-07!6;UBERON:0000077!1.73e-07!130;UBERON:0004119!1.90e-07!169;UBERON:0000925!1.90e-07!169;UBERON:0006595!1.90e-07!169;UBERON:0000365!7.24e-07!5;UBERON:0005156!9.08e-07!59;UBERON:0000990!9.08e-07!59 | |ontology_enrichment_uberon=UBERON:0001737!2.56e-10!9;UBERON:0004921!3.50e-09!129;UBERON:0004185!3.50e-09!129;UBERON:0001046!6.68e-09!19;UBERON:0005409!1.80e-08!35;UBERON:0000160!1.20e-07!27;UBERON:0005910!1.58e-07!6;UBERON:0000077!1.73e-07!130;UBERON:0004119!1.90e-07!169;UBERON:0000925!1.90e-07!169;UBERON:0006595!1.90e-07!169;UBERON:0000365!7.24e-07!5;UBERON:0005156!9.08e-07!59;UBERON:0000990!9.08e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.61e-14;9!UBERON:0001557;1.61e-14;9!UBERON:0005910;1.99e-10;6!UBERON:0000365;2.07e-09;5!UBERON:0002346;3.17e-08;4!UBERON:0000923;3.17e-08;4!UBERON:0010316;3.17e-08;4!UBERON:0005291;3.17e-08;4!UBERON:0001264;3.91e-07;10!UBERON:0002075;4.53e-07;18!UBERON:0001052;5.15e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.61e-14;9!UBERON:0001557;1.61e-14;9!UBERON:0005910;1.99e-10;6!UBERON:0000365;2.07e-09;5!UBERON:0002346;3.17e-08;4!UBERON:0000923;3.17e-08;4!UBERON:0010316;3.17e-08;4!UBERON:0005291;3.17e-08;4!UBERON:0001264;3.91e-07;10!UBERON:0002075;4.53e-07;18!UBERON:0001052;5.15e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.78e-14,9;UBERON:0001046,1.50e-10,19;UBERON:0005910,2.29e-10,6;UBERON:0000365,2.13e-09,5;UBERON:0004921,1.23e-07,118;UBERON:0001264,3.61e-07,10;UBERON:0002075,3.94e-07,18;UBERON:0001052,4.50e-07,4;UBERON:0004119,6.11e-07,160;UBERON:0000925,6.11e-07,160;UBERON:0006595,6.11e-07,160;UBERON:0000162,8.58e-07,14;UBERON:0001353,8.58e-07,14;UBERON:0000163,8.58e-07,14;UBERON:0006866,8.58e-07,14;UBERON:0000164,8.58e-07,14;UBERON:0000931,8.58e-07,14 | |||
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| ||
|short_description=p1@HOXB13 | |short_description=p1@HOXB13 | ||
}} | }} |
Revision as of 07:21, 16 November 2012
Short description: | p1@HOXB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HOXB13_5end |
Coexpression cluster: | C2415_prostate_neuroepithelioma_neuroectodermal_rhabdomyosarcoma_Melanocyte_carcinoid_argyrophil |
Association with transcript: | 13bp_to_NM_006361, uc002ioa.2_5end |
EntrezGene: | HOXB13 |
HGNC: | 5112 |
UniProt: | Q4KR72Q92826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.21e-15 | 253 |
melanocyte | 1.41e-08 | 10 |
melanoblast | 1.41e-08 | 10 |
transitional epithelial cell | 6.04e-08 | 4 |
urothelial cell | 6.04e-08 | 4 |
light melanocyte | 4.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.78e-14 | 9 |
hindgut | 1.50e-10 | 19 |
transitional epithelium | 2.29e-10 | 6 |
urothelium | 2.13e-09 | 5 |
subdivision of digestive tract | 1.23e-07 | 118 |
pancreas | 3.61e-07 | 10 |
viscus | 3.94e-07 | 18 |
rectum | 4.50e-07 | 4 |
endoderm-derived structure | 6.11e-07 | 160 |
endoderm | 6.11e-07 | 160 |
presumptive endoderm | 6.11e-07 | 160 |
cloaca | 8.58e-07 | 14 |
anal region | 8.58e-07 | 14 |
embryonic cloaca | 8.58e-07 | 14 |
terminal part of digestive tract | 8.58e-07 | 14 |
primitive urogenital sinus | 8.58e-07 | 14 |
proctodeum | 8.58e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.97e-36 | 143 |
disease of cellular proliferation | 5.86e-33 | 239 |
cancer | 6.81e-32 | 235 |
carcinoma | 1.45e-19 | 106 |
sarcoma | 4.28e-10 | 20 |
germ cell and embryonal cancer | 7.45e-09 | 22 |
germ cell cancer | 7.45e-09 | 22 |
organ system cancer | 8.28e-09 | 137 |
neuroectodermal tumor | 1.30e-08 | 10 |
adenocarcinoma | 1.71e-08 | 25 |
gastrointestinal system cancer | 1.88e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.