FFCP PHASE1:Hg19::chr15:33023095..33023177,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.06e-35!180;CL:0000057!4.44e-22!75;CL:0000680!1.18e-17!57;CL:0000056!1.18e-17!57;CL:0000355!1.18e-17!57;CL:0000192!6.97e-17!42;CL:0000514!6.97e-17!42;CL:0000187!7.23e-16!54;CL:0000359!7.88e-14!32;CL:0000183!9.48e-14!59;CL:0000393!3.05e-13!60;CL:0000211!3.05e-13!60;CL:0002620!3.00e-12!23;CL:0000048!1.40e-11!430;CL:0000723!1.01e-10!436;CL:0002334!3.11e-10!12;CL:0000034!7.02e-10!444;CL:0000222!6.87e-07!119 | |ontology_enrichment_celltype=CL:0000055!5.06e-35!180;CL:0000057!4.44e-22!75;CL:0000680!1.18e-17!57;CL:0000056!1.18e-17!57;CL:0000355!1.18e-17!57;CL:0000192!6.97e-17!42;CL:0000514!6.97e-17!42;CL:0000187!7.23e-16!54;CL:0000359!7.88e-14!32;CL:0000183!9.48e-14!59;CL:0000393!3.05e-13!60;CL:0000211!3.05e-13!60;CL:0002620!3.00e-12!23;CL:0000048!1.40e-11!430;CL:0000723!1.01e-10!436;CL:0002334!3.11e-10!12;CL:0000034!7.02e-10!444;CL:0000222!6.87e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.50e-15;23!CL:0000359;1.05e-14;32!CL:0002334;1.38e-13;12!CL:0000192;1.08e-12;43!CL:0002320;4.95e-10;188!CL:0000134;6.04e-10;55!CL:0000057;7.42e-09;73!CL:0000048;1.25e-08;58!CL:0000723;2.82e-08;61!CL:0000187;1.12e-07;55!CL:0000499;2.85e-07;28!CL:0002539;6.12e-07;10!CL:0002559;8.29e-07;5 | |ontology_enrichment_celltype_v019=CL:0002620;1.50e-15;23!CL:0000359;1.05e-14;32!CL:0002334;1.38e-13;12!CL:0000192;1.08e-12;43!CL:0002320;4.95e-10;188!CL:0000134;6.04e-10;55!CL:0000057;7.42e-09;73!CL:0000048;1.25e-08;58!CL:0000723;2.82e-08;61!CL:0000187;1.12e-07;55!CL:0000499;2.85e-07;28!CL:0002539;6.12e-07;10!CL:0002559;8.29e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.59e-25,76;CL:0000048,3.94e-21,427;CL:0000723,3.00e-20,433;CL:0000034,4.08e-19,441;CL:0000192,2.92e-18,43;CL:0000514,2.92e-18,43;CL:0000680,4.07e-16,58;CL:0000056,4.07e-16,58;CL:0000355,4.07e-16,58;CL:0002620,1.04e-15,23;CL:0000359,5.23e-15,32;CL:0000187,5.78e-14,55;CL:0002334,1.29e-13,12;CL:0000393,1.45e-11,61;CL:0000211,1.45e-11,61;CL:0002320,4.16e-11,361;CL:0000134,8.00e-10,354;CL:0000219,4.68e-08,386;CL:0000499,3.13e-07,28;CL:0002539,6.04e-07,10;CL:0002559,8.22e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-12;43!CL:0000355;1.01e-07;58 | |ontology_enrichment_development_v019=CL:0000514;1.08e-12;43!CL:0000355;1.01e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!2.19e-08!14 | |ontology_enrichment_disease=DOID:2394!2.19e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.45e-11;14!DOID:17;7.91e-07;5!DOID:450;7.91e-07;5!DOID:66;7.91e-07;5!DOID:423;7.91e-07;5!DOID:0080000;7.91e-07;5!DOID:11722;7.91e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;3.45e-11;14!DOID:17;7.91e-07;5!DOID:450;7.91e-07;5!DOID:66;7.91e-07;5!DOID:423;7.91e-07;5!DOID:0080000;7.91e-07;5!DOID:11722;7.91e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.60e-11,14;DOID:17,7.93e-07,5;DOID:450,7.93e-07,5;DOID:66,7.93e-07,5;DOID:423,7.93e-07,5;DOID:0080000,7.93e-07,5;DOID:11722,7.93e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.93e-22!83;UBERON:0002329!9.93e-22!83;UBERON:0003077!9.93e-22!83;UBERON:0003059!9.93e-22!83;UBERON:0007282!9.93e-22!83;UBERON:0009618!9.93e-22!83;UBERON:0007285!9.93e-22!83;UBERON:0004290!8.30e-19!70;UBERON:0000486!1.12e-15!82;UBERON:0002385!1.25e-15!63;UBERON:0001015!1.25e-15!63;UBERON:0000383!1.25e-15!63;UBERON:0001134!2.55e-15!61;UBERON:0002036!2.55e-15!61;UBERON:0003082!2.55e-15!61;UBERON:0005256!7.68e-15!143;UBERON:0000475!1.95e-12!365;UBERON:0002199!1.35e-11!45;UBERON:0002416!1.35e-11!45;UBERON:0002097!5.45e-11!40;UBERON:0003102!2.42e-10!95;UBERON:0002100!2.02e-09!216;UBERON:0001637!6.30e-09!42;UBERON:0003509!6.30e-09!42;UBERON:0004572!6.30e-09!42;UBERON:0004573!3.33e-08!33;UBERON:0004571!3.33e-08!33;UBERON:0001135!4.69e-08!15 | |ontology_enrichment_uberon=UBERON:0000914!9.93e-22!83;UBERON:0002329!9.93e-22!83;UBERON:0003077!9.93e-22!83;UBERON:0003059!9.93e-22!83;UBERON:0007282!9.93e-22!83;UBERON:0009618!9.93e-22!83;UBERON:0007285!9.93e-22!83;UBERON:0004290!8.30e-19!70;UBERON:0000486!1.12e-15!82;UBERON:0002385!1.25e-15!63;UBERON:0001015!1.25e-15!63;UBERON:0000383!1.25e-15!63;UBERON:0001134!2.55e-15!61;UBERON:0002036!2.55e-15!61;UBERON:0003082!2.55e-15!61;UBERON:0005256!7.68e-15!143;UBERON:0000475!1.95e-12!365;UBERON:0002199!1.35e-11!45;UBERON:0002416!1.35e-11!45;UBERON:0002097!5.45e-11!40;UBERON:0003102!2.42e-10!95;UBERON:0002100!2.02e-09!216;UBERON:0001637!6.30e-09!42;UBERON:0003509!6.30e-09!42;UBERON:0004572!6.30e-09!42;UBERON:0004573!3.33e-08!33;UBERON:0004571!3.33e-08!33;UBERON:0001135!4.69e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.87e-10;9!UBERON:0000042;4.87e-10;9!UBERON:0002097;9.20e-10;41!UBERON:0002199;4.06e-09;46!UBERON:0002416;4.06e-09;46!UBERON:0002384;5.75e-09;198!UBERON:0003688;5.09e-08;6!UBERON:0002358;5.09e-08;6!UBERON:0003684;5.09e-08;6!UBERON:0001178;5.09e-08;6!UBERON:0001135;9.44e-08;15!UBERON:0004573;1.51e-07;33!UBERON:0004571;1.51e-07;33!UBERON:0003102;2.21e-07;50!UBERON:0000992;5.95e-07;13!UBERON:0004237;6.12e-07;10!UBERON:0004695;6.12e-07;10!UBERON:0002111;6.12e-07;10!UBERON:0004178;6.12e-07;10!UBERON:0002073;8.29e-07;5!UBERON:0004905;8.73e-07;8!UBERON:0000982;8.73e-07;8!UBERON:0004770;8.73e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0004457;4.87e-10;9!UBERON:0000042;4.87e-10;9!UBERON:0002097;9.20e-10;41!UBERON:0002199;4.06e-09;46!UBERON:0002416;4.06e-09;46!UBERON:0002384;5.75e-09;198!UBERON:0003688;5.09e-08;6!UBERON:0002358;5.09e-08;6!UBERON:0003684;5.09e-08;6!UBERON:0001178;5.09e-08;6!UBERON:0001135;9.44e-08;15!UBERON:0004573;1.51e-07;33!UBERON:0004571;1.51e-07;33!UBERON:0003102;2.21e-07;50!UBERON:0000992;5.95e-07;13!UBERON:0004237;6.12e-07;10!UBERON:0004695;6.12e-07;10!UBERON:0002111;6.12e-07;10!UBERON:0004178;6.12e-07;10!UBERON:0002073;8.29e-07;5!UBERON:0004905;8.73e-07;8!UBERON:0000982;8.73e-07;8!UBERON:0004770;8.73e-07;8 | ||
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| ||
|short_description=p2@GREM1 | |short_description=p2@GREM1 | ||
}} | }} |
Revision as of 21:23, 15 November 2012
Short description: | p2@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 203bp_to_AF045800, BC069525, CU686886, HQ448400_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | O60565 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.59e-25 | 76 |
multi fate stem cell | 3.94e-21 | 427 |
somatic stem cell | 3.00e-20 | 433 |
stem cell | 4.08e-19 | 441 |
smooth muscle cell | 2.92e-18 | 43 |
smooth muscle myoblast | 2.92e-18 | 43 |
muscle precursor cell | 4.07e-16 | 58 |
myoblast | 4.07e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.07e-16 | 58 |
skin fibroblast | 1.04e-15 | 23 |
vascular associated smooth muscle cell | 5.23e-15 | 32 |
muscle cell | 5.78e-14 | 55 |
preadipocyte | 1.29e-13 | 12 |
electrically responsive cell | 1.45e-11 | 61 |
electrically active cell | 1.45e-11 | 61 |
connective tissue cell | 4.16e-11 | 361 |
mesenchymal cell | 8.00e-10 | 354 |
motile cell | 4.68e-08 | 386 |
stromal cell | 3.13e-07 | 28 |
aortic smooth muscle cell | 6.04e-07 | 10 |
hair follicle cell | 8.22e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.60e-11 | 14 |
musculoskeletal system disease | 7.93e-07 | 5 |
myotonic disease | 7.93e-07 | 5 |
muscle tissue disease | 7.93e-07 | 5 |
myopathy | 7.93e-07 | 5 |
muscular disease | 7.93e-07 | 5 |
myotonic dystrophy | 7.93e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.