FFCP PHASE1:Hg19::chr7:45953113..45953132,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!1.36e-11!75;CL:0000055!6.28e-11!180;CL:0002620!2.94e-09!23;CL:0002334!7.70e-09!12;CL:0000153!5.57e-07!9;CL:0000447!5.57e-07!9 | |ontology_enrichment_celltype=CL:0000057!1.36e-11!75;CL:0000055!6.28e-11!180;CL:0002620!2.94e-09!23;CL:0002334!7.70e-09!12;CL:0000153!5.57e-07!9;CL:0000447!5.57e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.09e-14;23!CL:0000153;5.38e-14;9!CL:0000447;5.38e-14;9!CL:0000138;1.26e-11;6!CL:0000327;4.46e-10;15!CL:0000499;4.28e-09;28!CL:0002595;1.83e-08;5!CL:0002615;7.65e-08;3!CL:0002579;1.53e-07;3!CL:0000359;7.70e-07;32 | |ontology_enrichment_celltype_v019=CL:0002620;3.09e-14;23!CL:0000153;5.38e-14;9!CL:0000447;5.38e-14;9!CL:0000138;1.26e-11;6!CL:0000327;4.46e-10;15!CL:0000499;4.28e-09;28!CL:0002595;1.83e-08;5!CL:0002615;7.65e-08;3!CL:0002579;1.53e-07;3!CL:0000359;7.70e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.36e-14,23;CL:0000153,2.88e-14,9;CL:0000447,2.88e-14,9;CL:0000058,9.94e-12,6;CL:0000138,9.94e-12,6;CL:0000057,1.43e-11,76;CL:0000327,2.96e-10,15;CL:0000499,2.99e-09,28;CL:0000048,1.44e-08,427;CL:0002595,1.77e-08,5;CL:0000723,3.02e-08,433;CL:0000034,7.84e-08,441;CL:0002615,1.42e-07,3;CL:0002579,2.07e-07,3;CL:0000359,3.91e-07,32 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!4.88e-07!5;DOID:450!4.88e-07!5;DOID:66!4.88e-07!5;DOID:423!4.88e-07!5;DOID:0080000!4.88e-07!5;DOID:11722!4.88e-07!5 | |ontology_enrichment_disease=DOID:17!4.88e-07!5;DOID:450!4.88e-07!5;DOID:66!4.88e-07!5;DOID:423!4.88e-07!5;DOID:0080000!4.88e-07!5;DOID:11722!4.88e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.23e-13;5!DOID:450;3.23e-13;5!DOID:66;3.23e-13;5!DOID:423;3.23e-13;5!DOID:0080000;3.23e-13;5!DOID:11722;3.23e-13;5 | |ontology_enrichment_disease_v019=DOID:17;3.23e-13;5!DOID:450;3.23e-13;5!DOID:66;3.23e-13;5!DOID:423;3.23e-13;5!DOID:0080000;3.23e-13;5!DOID:11722;3.23e-13;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.53e-13,5;DOID:450,2.53e-13,5;DOID:66,2.53e-13,5;DOID:423,2.53e-13,5;DOID:0080000,2.53e-13,5;DOID:11722,2.53e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.39e-13!14;UBERON:0000158!5.39e-13!14;UBERON:0004923!2.30e-08!57;UBERON:0002199!5.12e-08!45;UBERON:0002416!5.12e-08!45;UBERON:0003124!7.51e-08!7;UBERON:0000478!9.08e-08!24;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0002097!3.12e-07!40;UBERON:0003688!4.88e-07!6;UBERON:0002358!4.88e-07!6;UBERON:0003684!4.88e-07!6;UBERON:0001178!4.88e-07!6;UBERON:0004872!7.99e-07!84;UBERON:0000305!8.94e-07!7;UBERON:0001637!9.01e-07!42;UBERON:0003509!9.01e-07!42;UBERON:0004572!9.01e-07!42 | |ontology_enrichment_uberon=UBERON:0005631!5.39e-13!14;UBERON:0000158!5.39e-13!14;UBERON:0004923!2.30e-08!57;UBERON:0002199!5.12e-08!45;UBERON:0002416!5.12e-08!45;UBERON:0003124!7.51e-08!7;UBERON:0000478!9.08e-08!24;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0002097!3.12e-07!40;UBERON:0003688!4.88e-07!6;UBERON:0002358!4.88e-07!6;UBERON:0003684!4.88e-07!6;UBERON:0001178!4.88e-07!6;UBERON:0004872!7.99e-07!84;UBERON:0000305!8.94e-07!7;UBERON:0001637!9.01e-07!42;UBERON:0003509!9.01e-07!42;UBERON:0004572!9.01e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.21e-16;9!UBERON:0000042;7.21e-16;9!UBERON:0003688;1.03e-13;6!UBERON:0002358;1.03e-13;6!UBERON:0003684;1.03e-13;6!UBERON:0001178;1.03e-13;6!UBERON:0002097;5.79e-09;41!UBERON:0003834;1.83e-08;5!UBERON:0001533;1.83e-08;5!UBERON:0002199;4.53e-07;46!UBERON:0002416;4.53e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0004457;7.21e-16;9!UBERON:0000042;7.21e-16;9!UBERON:0003688;1.03e-13;6!UBERON:0002358;1.03e-13;6!UBERON:0003684;1.03e-13;6!UBERON:0001178;1.03e-13;6!UBERON:0002097;5.79e-09;41!UBERON:0003834;1.83e-08;5!UBERON:0001533;1.83e-08;5!UBERON:0002199;4.53e-07;46!UBERON:0002416;4.53e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.53e-13,6;UBERON:0002358,2.53e-13,6;UBERON:0003684,2.53e-13,6;UBERON:0001178,2.53e-13,6;UBERON:0004457,1.98e-11,12;UBERON:0000042,1.98e-11,12;UBERON:0002097,5.88e-11,41;UBERON:0002199,1.20e-10,46;UBERON:0002416,1.20e-10,46;UBERON:0003834,1.77e-08,5;UBERON:0001533,1.77e-08,5;UBERON:0005631,8.49e-08,14;UBERON:0000158,8.49e-08,14;UBERON:0004573,7.52e-07,33;UBERON:0004571,7.52e-07,33 | |||
|phase1_expression=1.45342703416445,1.2846031433459,1.40954404095971,1.0007329835313,2.23480547213644,3.48935409640147,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,29.999449647919,18.048164782892,32.7353132851462,1.5905718941022,13.1391414981712,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,0,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,1.97334038733728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,3.94657198515496,3.20336083227851,3.81477422087211,4.20127534518163,1.54578793857658,2.83404594050192,2.97786970130544,0.506328996723799,3.11798416515836,9.08761587278812,4.41839513483037,0.646584227275248,9.23024940543197,6.7503905812519,0.847802961552438,0,0,0.286804595389004,0,0,0,0,0,0,0,1.92972281457866,0,1.39310378409594,0.721879481669586,0.354920400119532,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0.387815147273333,0,0,0.531876233169741,1.04007436911366,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30303176000821,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,1.03985430765404,2.14114786556594,0.788512075169673,0.35142424497814,0,0,0,0,0.553107505625109,0,0,0,0,0,0,2.12189300012382,1.66435439510497,0.604780586659361,0.992431231275107,0.306923946576125,1.96462066103151,1.15325234330131,1.53512174720011,1.28683136914886,1.48418066444991,0.154209693802656,1.06537035187876,0.164254312027618,0,0.697262270759755,0,0,0,0.459257792658427,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,1.85938219718914,2.83331112147576,0.6970372701606,0.308033580176089,0,0,2.59453906745488,1.28812398067792,0,0,0,0,0.42793898803392,0,2.35484592059769,0,0,0,0,1.58510321173008,0,0,1.70599442741899,0,0,0,0,1.10273068709225,10.6150236038595,4.38450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,3.79993743535795,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.67121139316383,2.07875276582847,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,9.33118762985422,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,2.55200927785536,0.366390373607449,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,1.56203764501618,0.0979923974143777,0,0.34945333648406,1.37588825977293,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0,0,0,0,6.99333633537456,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0,0.858452096273142,0,0.134366944973453,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,1.25501137532991,0,0,0,0,5.42999601753713,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.757612021100357,2.26411111577318,2.66943366478961,0,1.66354016139563,0.310874401165561,0.147855149989634,0,0,0,0,0,0.521745061811734,0,1.52322084867518,0,0,0,0,2.3885753321917,0,0.686791410365586,1.01024846629776,0,0,0,0,1.13352962756136,0,0.244736704506468,2.8654214573038,1.54400723580486,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0.318004350653419,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,2.6830109804315,0,0,0.606965604236632,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,4.10262423315381,9.07728206985395,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,2.20905249094162,0,0.128915775947154,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,7.85698568673411,6.05677186973305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0.179650404213174,0,0.122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| ||
|short_description=p13@IGFBP3 | |short_description=p13@IGFBP3 | ||
}} | }} |
Revision as of 19:43, 15 November 2012
Short description: | p13@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -437bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.36e-14 | 23 |
GAG secreting cell | 2.88e-14 | 9 |
carbohydrate secreting cell | 2.88e-14 | 9 |
chondroblast | 9.94e-12 | 6 |
chondrocyte | 9.94e-12 | 6 |
fibroblast | 1.43e-11 | 76 |
extracellular matrix secreting cell | 2.96e-10 | 15 |
stromal cell | 2.99e-09 | 28 |
multi fate stem cell | 1.44e-08 | 427 |
smooth muscle cell of the subclavian artery | 1.77e-08 | 5 |
somatic stem cell | 3.02e-08 | 433 |
stem cell | 7.84e-08 | 441 |
adipocyte of omentum tissue | 1.42e-07 | 3 |
omentum preadipocyte | 2.07e-07 | 3 |
vascular associated smooth muscle cell | 3.91e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.53e-13 | 6 |
peritoneum | 2.53e-13 | 6 |
abdominal cavity | 2.53e-13 | 6 |
visceral peritoneum | 2.53e-13 | 6 |
cavity lining | 1.98e-11 | 12 |
serous membrane | 1.98e-11 | 12 |
skin of body | 5.88e-11 | 41 |
integument | 1.20e-10 | 46 |
integumental system | 1.20e-10 | 46 |
thoracic segment blood vessel | 1.77e-08 | 5 |
subclavian artery | 1.77e-08 | 5 |
extraembryonic membrane | 8.49e-08 | 14 |
membranous layer | 8.49e-08 | 14 |
systemic artery | 7.52e-07 | 33 |
systemic arterial system | 7.52e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.53e-13 | 5 |
myotonic disease | 2.53e-13 | 5 |
muscle tissue disease | 2.53e-13 | 5 |
myopathy | 2.53e-13 | 5 |
muscular disease | 2.53e-13 | 5 |
myotonic dystrophy | 2.53e-13 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.