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|namespace=
|namespace=
|def=
|def=
|xref=EHDAA2:0000171;;EMAPA:16561;;http://upload.wikimedia.org/wikipedia/commons/thumb/4/4f/Gray1088.png/200px-Gray1088.png;;VHOG:0001351
|xref=EHDAA2:0000171;;EMAPA:16561;;EMAPA:16565;;http://upload.wikimedia.org/wikipedia/commons/thumb/4/4f/Gray1088.png/200px-Gray1088.png;;VHOG:0001351
|is_a=UBERON:0000077;;UBERON:0003914;;UBERON:0009497
|is_a=UBERON:0003914;;UBERON:0009497
|synonym="hepatic diverticulum" RELATED [EMAPA:16561]
|synonym="hepatic diverticulum" RELATED [EMAPA:16561]
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0004161
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0006235
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:05, 26 June 2012

Name:biliary bud
Xrefs:
links:

EHDAA2:0000171
EMAPA:16561
EMAPA:16565
[ 200px-Gray1088.png 200px-Gray1088.png]

VHOG:0001351
Synonyms: "hepatic diverticulum" RELATED [EMAPA:16561]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0009497(epithelium of foregut-midgut junction)



Children

develops from:UBERON:0001173 (biliary tree),UBERON:0002110 (gallbladder)
part of:UBERON:0006242 (gall bladder primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004912 (biliary bud), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_5a602257860f31ae6792ece8522f4c51p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_5a602257860f31ae6792ece8522f4c51p@chr17:28107053..28107062, -
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_5a602257860f31ae6792ece8522f4c51p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_5a602257860f31ae6792ece8522f4c51p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_5a602257860f31ae6792ece8522f4c51p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_5a602257860f31ae6792ece8522f4c51p@chr16:30944451..30944485, +
3.07e-86FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_5a602257860f31ae6792ece8522f4c51p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_5a602257860f31ae6792ece8522f4c51p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_5a602257860f31ae6792ece8522f4c51p@chr11:115280630..115280662, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691575..86691580, -
3.07e-86FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_5a602257860f31ae6792ece8522f4c51p@chr11:88890706..88890745, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_5a602257860f31ae6792ece8522f4c51p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_5a602257860f31ae6792ece8522f4c51p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_5a602257860f31ae6792ece8522f4c51p8@Map3k8
3.07e-86FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_5a602257860f31ae6792ece8522f4c51p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_5a602257860f31ae6792ece8522f4c51p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_5a602257860f31ae6792ece8522f4c51p@chr17:34796428..34796430, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_5a602257860f31ae6792ece8522f4c51p@chr5:64344878..64344887, -
3.07e-86FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_5a602257860f31ae6792ece8522f4c51p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_5a602257860f31ae6792ece8522f4c51p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_5a602257860f31ae6792ece8522f4c51p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_5a602257860f31ae6792ece8522f4c51p@chr15:82209805..82209851, +
3.07e-86FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_5a602257860f31ae6792ece8522f4c51p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_5a602257860f31ae6792ece8522f4c51p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_5a602257860f31ae6792ece8522f4c51p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_5a602257860f31ae6792ece8522f4c51p@chr5:75375903..75375931, +
3.07e-86FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_5a602257860f31ae6792ece8522f4c51p4@Gm4262
3.07e-86FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_5a602257860f31ae6792ece8522f4c51p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_5a602257860f31ae6792ece8522f4c51p@chr8:111108947..111108951, +
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_5a602257860f31ae6792ece8522f4c51p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_5a602257860f31ae6792ece8522f4c51p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_5a602257860f31ae6792ece8522f4c51p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_5a602257860f31ae6792ece8522f4c51p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_5a602257860f31ae6792ece8522f4c51p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_5a602257860f31ae6792ece8522f4c51p6@Adamts1
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_5a602257860f31ae6792ece8522f4c51p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE1:Mm9::chr15:88669906..88669914,+#_5a602257860f31ae6792ece8522f4c51p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_5a602257860f31ae6792ece8522f4c51p@chr8:89310639..89310641, -
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_5a602257860f31ae6792ece8522f4c51p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_5a602257860f31ae6792ece8522f4c51p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE1:Mm9::chr18:5125608..5125613,+#_5a602257860f31ae6792ece8522f4c51p@chr18:5125608..5125613, +
3.07e-86FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_5a602257860f31ae6792ece8522f4c51p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_5a602257860f31ae6792ece8522f4c51p@chr10:93819538..93819549, +
3.07e-86FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_5a602257860f31ae6792ece8522f4c51p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_5a602257860f31ae6792ece8522f4c51p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_5a602257860f31ae6792ece8522f4c51p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_5a602257860f31ae6792ece8522f4c51p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_5a602257860f31ae6792ece8522f4c51p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_5a602257860f31ae6792ece8522f4c51p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_5a602257860f31ae6792ece8522f4c51p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_5a602257860f31ae6792ece8522f4c51p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_5a602257860f31ae6792ece8522f4c51p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_5a602257860f31ae6792ece8522f4c51p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_5a602257860f31ae6792ece8522f4c51p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_5a602257860f31ae6792ece8522f4c51p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_5a602257860f31ae6792ece8522f4c51p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_5a602257860f31ae6792ece8522f4c51p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_5a602257860f31ae6792ece8522f4c51p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_5a602257860f31ae6792ece8522f4c51p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_5a602257860f31ae6792ece8522f4c51p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_5a602257860f31ae6792ece8522f4c51p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr16:91441786..91441787,-#_5a602257860f31ae6792ece8522f4c51p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_5a602257860f31ae6792ece8522f4c51p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_5a602257860f31ae6792ece8522f4c51p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr17:35945332..35945335,+#_5a602257860f31ae6792ece8522f4c51p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_5a602257860f31ae6792ece8522f4c51p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_5a602257860f31ae6792ece8522f4c51p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_5a602257860f31ae6792ece8522f4c51p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_5a602257860f31ae6792ece8522f4c51p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_5a602257860f31ae6792ece8522f4c51p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_5a602257860f31ae6792ece8522f4c51p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_5a602257860f31ae6792ece8522f4c51p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_5a602257860f31ae6792ece8522f4c51p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_5a602257860f31ae6792ece8522f4c51p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_5a602257860f31ae6792ece8522f4c51p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_5a602257860f31ae6792ece8522f4c51p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_5a602257860f31ae6792ece8522f4c51p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_5a602257860f31ae6792ece8522f4c51p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr1:132405466..132405470,+#_5a602257860f31ae6792ece8522f4c51p@chr1:132405466..132405470, +
3.07e-86FFCP PHASE1:Mm9::chr14:101778294..101778296,+#_5a602257860f31ae6792ece8522f4c51p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_5a602257860f31ae6792ece8522f4c51p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_5a602257860f31ae6792ece8522f4c51p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_5a602257860f31ae6792ece8522f4c51p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_5a602257860f31ae6792ece8522f4c51p@chr13:113554186..113554192, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_5a602257860f31ae6792ece8522f4c51p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_5a602257860f31ae6792ece8522f4c51p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_5a602257860f31ae6792ece8522f4c51p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_5a602257860f31ae6792ece8522f4c51p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_5a602257860f31ae6792ece8522f4c51p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_5a602257860f31ae6792ece8522f4c51p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_5a602257860f31ae6792ece8522f4c51p@chr15:97402708..97402712, +
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_5a602257860f31ae6792ece8522f4c51p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_5a602257860f31ae6792ece8522f4c51p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_5a602257860f31ae6792ece8522f4c51p@chr18:65159026..65159034, -

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