FFCP PHASE1:Hg19::chr6:160114266..160114282,-: Difference between revisions
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|description=CAGE_peak_1_at_SOD2_5end | |description=CAGE_peak_1_at_SOD2_5end | ||
|id=chr6:160114266..160114282,- | |id=chr6:160114266..160114282,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000860;1.22e-18;33!CL:0002057;1.22e-18;33!CL:0000473;4.81e-18;39!CL:0000234;4.81e-18;39!CL:0000576;1.84e-12;48!CL:0000766;3.66e-10;69!CL:0000359;1.96e-07;32 | ||
|ontology_enrichment_development=CL:0002057;2.72e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
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07,8.33478079988406 | ||
|short_description=p1@SOD2 | |short_description=p1@SOD2 | ||
}} | }} | ||
Revision as of 08:23, 2 August 2012
| Short description: | p1@SOD2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_SOD2_5end |
| Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
| Association with transcript: | 0bp_to_ENST00000367055, ENST00000444946, ENST00000452684, ENST00000546260_5end |
| EntrezGene: | SOD2 |
| HGNC: | 11180 |
| UniProt: | P04179B4E3K9G5E9P6F5GXZ9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
