FFCP PHASE1:Mm9::chr6:41555650..41555670,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13848 | |EntrezGene=13848 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=O08644,F8WHT4 | |UniProt=O08644,F8WHT4 | ||
|association_with_transcript=169bp_to_ENSMUST00000031903,ENSMUST00000114732,ENSMUST00000114733,NM_001146351,NM_007680,uc009bqa.2,uc009bqb.2_5end | |association_with_transcript=169bp_to_ENSMUST00000031903,ENSMUST00000114732,ENSMUST00000114733,NM_001146351,NM_007680,uc009bqa.2,uc009bqb.2_5end | ||
|cluster_id=chr6:41555650..41555670,+ | |||
|description=CAGE_peak_2_at_Ephb6_5end | |description=CAGE_peak_2_at_Ephb6_5end | ||
|id=chr6:41555650..41555670,+ | |id=chr6:41555650..41555670,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.17e-11!94;UBERON:0007811!2.36e-11!86;UBERON:0004121!3.62e-10!102;UBERON:0000924!3.62e-10!102;UBERON:0006601!3.62e-10!102;UBERON:0002020!1.52e-09!34;UBERON:0000033!8.03e-09!63;UBERON:0002791!1.80e-08!29;UBERON:0003528!1.80e-08!29;UBERON:0001893!1.80e-08!29;UBERON:0002021!2.56e-08!10;UBERON:0000411!2.56e-08!10;UBERON:0001950!2.56e-08!10;UBERON:0001049!4.07e-08!52;UBERON:0005068!4.07e-08!52;UBERON:0006241!4.07e-08!52;UBERON:0007135!4.07e-08!52;UBERON:0003056!6.65e-08!49;UBERON:0003080!9.37e-08!40;UBERON:0002619!1.40e-07!17;UBERON:0000956!1.43e-07!21;UBERON:0001869!1.43e-07!21;UBERON:0000203!1.43e-07!21;UBERON:0002780!2.74e-07!39;UBERON:0001890!2.74e-07!39;UBERON:0006240!2.74e-07!39;UBERON:0000955!3.33e-07!50;UBERON:0006238!3.33e-07!50;UBERON:0001017!5.97e-07!73;UBERON:0005743!5.97e-07!73;UBERON:0002616!6.14e-07!49;UBERON:0002346!8.04e-07!71;UBERON:0003075!8.04e-07!71;UBERON:0007284!8.04e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.97e-12,10;UBERON:0000411,2.97e-12,10;UBERON:0001950,2.97e-12,10;UBERON:0002619,3.21e-08,17;UBERON:0010371,2.47e-07,73;UBERON:0000956,3.20e-07,21;UBERON:0001869,3.20e-07,21;UBERON:0000203,3.20e-07,21;UBERON:0002020,3.26e-07,34;UBERON:0000014,4.46e-07,5;UBERON:0001003,4.46e-07,5;UBERON:0002097,4.46e-07,5;UBERON:0002199,4.46e-07,5;UBERON:0007029,4.46e-07,5;UBERON:0007376,4.46e-07,5;UBERON:0002416,4.46e-07,5;UBERON:0007383,4.46e-07,5;UBERON:0004121,7.20e-07,95;UBERON:0000924,7.20e-07,95;UBERON:0006601,7.20e-07,95 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,2.06268836910977,1.21389876515759,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0.299600110518405,0,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,2.20868540951614,0.244981598429908,0.383381884072945,0.919218786610021,0,2.42605942361857,1.99688493233117,0.659431438650969,0.457438218012048,0,0.837548997004143,2.25105044012672,1.22238598221448,1.17851434189467,1.56608848879013,0.745597783301202,0.530083353332288,0,0.289864488701678,0,0,0,0,0,0.983110940922263,1.53387290320252,1.81850203222008,1.7666978725517,6.90132756905734,2.56652954828636,20.3844191765317,21.3320010945999,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0,0,0,0,0.127070227073065,3.59497534571574,8.23501085073528,0.753926112677186,11.9938780932671,15.5986428971502,1.24672826735736,3.56930778749067,0.611036183101898,0.746441823660558,3.28539585963777,0.631325567659422,0.260240885925407,0,0.360124259610698,0.60281927134286,0.272145996605311,0.512454881139399,0.843315521037559,1.29351685369508,0.215567992932842,0,0.351902248327898,0.219195732427575,0.556094498451196,2.78601733217733,3.49829631893504,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0,0.219550115291051,0,2.52347938276953,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.252946148497029,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0,0.655453258862952,0.172684981865896,0,0,0,0.491764273019036,1.37968373152366,0.80275294993896,1.05490517932983,0,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0.584511715822624,1.18586333383957,1.28528526568723,1.13552068166615,0.534196811001766,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0,0.608929898229199,0,0,0.220528398054962,41.0566769824285,15.0161916827192,10.4944489374991,19.218947384505,24.6211349617592,0,2.78137953015765,0,0.82554747185289,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,0.954670618015114,0.316335993581135,0.406638934253697,0.216010681643603,1.25452977608681,1.74690050996942,6.87808166562586,5.53778153359751,3.92633912976044,0,0.621339313086926,0,0.598066184175915,0.66183396182839,0.194451188344048,0.516639293910924,0.506868376472335,0.704143431874524,0.2604087696879,0.419437377702843,0.241584120826006,0,0.316011120628178,1.41907650703115,2.2596410576262,0.909445760844565,0.537080087002444,1.19208812868759,0.721172697119813,0.886137163047463,0.706765149637033,0.533447646584999,0.504130925684203,1.26695244961678,0.962118416403295,1.16876902181569,9.9761368790693,0,0,0,0.19318959403219,0,0,11.3615240911905,0,14.6835479080437,8.74617949363636,16.0410743763031,13.2326950404639,20.5524755931193,26.4387864086395,17.550585006027,10.8077088773813,15.8599843144472,15.0150490408028,0,0.798049746802062,0.512200817262403,0.243106717068294,0.628839487883947,0.367687016900028,1.77797382241292,1.64828045791115,3.20919209591815,1.51618327058278,1.01391719956096,0.943131706930381,1.49826411951812,1.6646539625266,1.49332219284595,1.90517476513229,1.39061191133827,1.15745532278223,2.47251540481984,1.91358596174717,2.74295401908332,3.19456451086807,1.43061713968393,2.61623549938191,1.50575008664529,1.52306294205018,2.0122077016005,3.15683653725411,1.49384525230448,1.68342681497322,1.54225523561426,1.57607171800902,1.63692417267876,2.47898945897546,1.73615949883027,2.74791635731741,1.16965804222704,4.51229213501426,1.3390183244819,3.30887128679273,0.927471342481686 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.573066879877513,2.06268836910977,1.21389876515759,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0.299600110518405,0,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,2.20868540951614,0.244981598429908,0.383381884072945,0.919218786610021,0,2.42605942361857,1.99688493233117,0.659431438650969,0.457438218012048,0,0.837548997004143,2.25105044012672,1.22238598221448,1.17851434189467,1.56608848879013,0.745597783301202,0.530083353332288,0,0.289864488701678,0,0,0,0,0,0.983110940922263,1.53387290320252,1.81850203222008,1.7666978725517,6.90132756905734,2.56652954828636,20.3844191765317,21.3320010945999,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.441683036920787,0,0,0.292780797011547,0,0,0,0,0.127070227073065,3.59497534571574,8.23501085073528,0.753926112677186,11.9938780932671,15.5986428971502,1.24672826735736,3.56930778749067,0.611036183101898,0.746441823660558,3.28539585963777,0.631325567659422,0.260240885925407,0,0.360124259610698,0.60281927134286,0.272145996605311,0.512454881139399,0.843315521037559,1.29351685369508,0.215567992932842,0,0.351902248327898,0.219195732427575,0.556094498451196,2.78601733217733,3.49829631893504,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0,0.219550115291051,0,2.52347938276953,1.3377599609307,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.252946148497029,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.335012514883631,0.238043640886014,0.390267295715598,0,0,0,0.655453258862952,0.172684981865896,0,0,0,0.491764273019036,1.37968373152366,0.80275294993896,1.05490517932983,0,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0.584511715822624,1.18586333383957,1.28528526568723,1.13552068166615,0.534196811001766,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0,0.608929898229199,0,0,0.220528398054962,41.0566769824285,15.0161916827192,10.4944489374991,19.218947384505,24.6211349617592,0,2.78137953015765,0,0.82554747185289,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,0.954670618015114,0.316335993581135,0.406638934253697,0.216010681643603,1.25452977608681,1.74690050996942,6.87808166562586,5.53778153359751,3.92633912976044,0,0.621339313086926,0,0.598066184175915,0.66183396182839,0.194451188344048,0.516639293910924,0.506868376472335,0.704143431874524,0.2604087696879,0.419437377702843,0.241584120826006,0,0.316011120628178,1.41907650703115,2.2596410576262,0.909445760844565,0.537080087002444,1.19208812868759,0.721172697119813,0.886137163047463,0.706765149637033,0.533447646584999,0.504130925684203,1.26695244961678,0.962118416403295,1.16876902181569,9.9761368790693,0,0,0,0.19318959403219,0,0,11.3615240911905,0,14.6835479080437,8.74617949363636,16.0410743763031,13.2326950404639,20.5524755931193,26.4387864086395,17.550585006027,10.8077088773813,15.8599843144472,15.0150490408028,0,0.798049746802062,0.512200817262403,0.243106717068294,0.628839487883947,0.367687016900028,1.77797382241292,1.64828045791115,3.20919209591815,1.51618327058278,1.01391719956096,0.943131706930381,1.49826411951812,1.6646539625266,1.49332219284595,1.90517476513229,1.39061191133827,1.15745532278223,2.47251540481984,1.91358596174717,2.74295401908332,3.19456451086807,1.43061713968393,2.61623549938191,1.50575008664529,1.52306294205018,2.0122077016005,3.15683653725411,1.49384525230448,1.68342681497322,1.54225523561426,1.57607171800902,1.63692417267876,2.47898945897546,1.73615949883027,2.74791635731741,1.16965804222704,4.51229213501426,1.3390183244819,3.30887128679273,0.927471342481686 | ||
|short_description=p2@Ephb6 | |short_description=p2@Ephb6 | ||
}} | }} |
Latest revision as of 05:32, 27 September 2015
Short description: | p2@Ephb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ephb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 169bp_to_ENSMUST00000031903, ENSMUST00000114732, ENSMUST00000114733, NM_001146351, NM_007680, uc009bqa.2, uc009bqb.2_5end |
EntrezGene: | Ephb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.97e-12 | 10 |
visual cortex | 2.97e-12 | 10 |
neocortex | 2.97e-12 | 10 |
regional part of cerebral cortex | 3.21e-08 | 17 |
ecto-epithelium | 2.47e-07 | 73 |
cerebral cortex | 3.20e-07 | 21 |
cerebral hemisphere | 3.20e-07 | 21 |
pallium | 3.20e-07 | 21 |
gray matter | 3.26e-07 | 34 |
zone of skin | 4.46e-07 | 5 |
skin epidermis | 4.46e-07 | 5 |
skin of body | 4.46e-07 | 5 |
integument | 4.46e-07 | 5 |
surface | 4.46e-07 | 5 |
outer epithelium | 4.46e-07 | 5 |
integumental system | 4.46e-07 | 5 |
enveloping layer of ectoderm | 4.46e-07 | 5 |
ectoderm-derived structure | 7.20e-07 | 95 |
ectoderm | 7.20e-07 | 95 |
presumptive ectoderm | 7.20e-07 | 95 |