FFCP PHASE1:Mm9::chr6:36665696..36665715,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=471 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-162bp_to_uc009biz.1_5end | |association_with_transcript=-162bp_to_uc009biz.1_5end | ||
|cluster_id=chr6:36665696..36665715,- | |||
|description=CAGE_peak_6_at_uc009biz.1_5end | |description=CAGE_peak_6_at_uc009biz.1_5end | ||
|id=chr6:36665696..36665715,- | |id=chr6:36665696..36665715,- | ||
|ontology_enrichment_celltype=CL:0000117!2.79e-14!23;CL:0000337!2.79e-14!23;CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0000221!8.52e-11!44;CL:0000133!8.52e-11!44;CL:0000393!1.92e-10!39;CL:0000211!1.92e-10!39;CL:0002319!3.62e-10!43;CL:0000055!2.75e-08!50 | |ontology_enrichment_celltype=CL:0000117!2.79e-14!23;CL:0000337!2.79e-14!23;CL:0000540!1.27e-12!33;CL:0000047!1.27e-12!33;CL:0000031!1.27e-12!33;CL:0000404!1.27e-12!33;CL:0000221!8.52e-11!44;CL:0000133!8.52e-11!44;CL:0000393!1.92e-10!39;CL:0000211!1.92e-10!39;CL:0002319!3.62e-10!43;CL:0000055!2.75e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.14e-23,23;CL:0000337,2.14e-23,23;CL:0000540,1.65e-17,33;CL:0000047,1.65e-17,33;CL:0000031,1.65e-17,33;CL:0000404,1.65e-17,33;CL:0000221,1.22e-15,44;CL:0000133,1.22e-15,44;CL:0002319,3.40e-14,43;CL:0000393,3.48e-14,39;CL:0000211,3.48e-14,39;CL:0002612,2.32e-08,3;CL:0002321,3.62e-08,70;CL:0002614,1.12e-07,3;CL:0002610,1.62e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.85e-18!73;UBERON:0005743!1.85e-18!73;UBERON:0000073!2.60e-17!75;UBERON:0001016!2.60e-17!75;UBERON:0002020!1.64e-13!34;UBERON:0001049!4.24e-13!52;UBERON:0005068!4.24e-13!52;UBERON:0006241!4.24e-13!52;UBERON:0007135!4.24e-13!52;UBERON:0004121!1.26e-12!102;UBERON:0000924!1.26e-12!102;UBERON:0006601!1.26e-12!102;UBERON:0000955!9.62e-12!50;UBERON:0006238!9.62e-12!50;UBERON:0002616!1.54e-11!49;UBERON:0003080!7.39e-11!40;UBERON:0002780!1.08e-10!39;UBERON:0001890!1.08e-10!39;UBERON:0006240!1.08e-10!39;UBERON:0000033!1.67e-10!63;UBERON:0002346!3.74e-10!71;UBERON:0003075!3.74e-10!71;UBERON:0007284!3.74e-10!71;UBERON:0002791!6.60e-10!29;UBERON:0003528!6.60e-10!29;UBERON:0001893!6.60e-10!29;UBERON:0003056!4.11e-09!49;UBERON:0000153!8.95e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.35e-19,34;UBERON:0001017,1.81e-16,73;UBERON:0000073,2.21e-16,54;UBERON:0001016,7.26e-16,75;UBERON:0001948,3.54e-13,5;UBERON:0002315,3.54e-13,5;UBERON:0004121,1.81e-12,95;UBERON:0000924,1.81e-12,95;UBERON:0006601,1.81e-12,95;UBERON:0001049,2.74e-12,52;UBERON:0005068,2.74e-12,52;UBERON:0006241,2.74e-12,52;UBERON:0007135,2.74e-12,52;UBERON:0002240,6.63e-11,6;UBERON:0005174,6.63e-11,6;UBERON:0001137,6.63e-11,6;UBERON:0003528,7.19e-11,29;UBERON:0002791,7.19e-11,29;UBERON:0001893,7.19e-11,29;UBERON:0002021,7.40e-11,10;UBERON:0000411,7.40e-11,10;UBERON:0001950,7.40e-11,10;UBERON:0010371,8.62e-10,73;UBERON:0002346,3.72e-09,64;UBERON:0003075,3.72e-09,64;UBERON:0007284,3.72e-09,64;UBERON:0002780,1.31e-08,39;UBERON:0001890,1.31e-08,39;UBERON:0006240,1.31e-08,39;UBERON:0002257,2.32e-08,3;UBERON:0003080,2.55e-08,40;UBERON:0010314,1.08e-07,92;UBERON:0002038,1.12e-07,3;UBERON:0009663,1.12e-07,3;UBERON:0009661,1.12e-07,3;UBERON:0000125,1.12e-07,3;UBERON:0002308,1.12e-07,3;UBERON:0004684,1.62e-07,3;UBERON:0002275,1.62e-07,3;UBERON:0002420,4.91e-07,8;UBERON:0007245,4.91e-07,8;UBERON:0010009,4.91e-07,8;UBERON:0010011,4.91e-07,8;UBERON:0000454,4.91e-07,8;UBERON:0002616,7.51e-07,46 | |||
|phase1_expression=16.1750335575842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,0.945041568321835,0.630974884054146,4.28476476605705,3.75476519617743,0.489963196859816,0.575072826109418,0,2.20231761998777,1.0214987046815,1.53606533256243,0.659431438650969,1.00636407962651,2.08365348222704,2.23346399201105,1.12552522006336,1.83357897332172,4.41942878210502,1.85083185038834,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.869121600961382,0.767146371990992,0.83115217823824,0.486723789203273,1.32391173005411,0,0,0,0.390361328888111,0,0,0.60281927134286,0.204109497453984,0,0.281105173679186,0,0.431135985865684,0.567318240503458,0,0.43839146485515,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0,0,0,1.98068267607116,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0.420579897128254,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.189667900953082,0.913988100877831,1.1270773567308,0.203651327845314,0,0.561086559122548,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.468846746368813,4.09837363441689,0,0.315508219416257,0.390438744296638,0,0.716906393857656,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,1.06839362200353,1.14020871547503,0,0,1.21390318077491,1.51161778482376,0.943025398779491,0,0,0.258428293168221,0.363533729477506,1.42598951353889,0,0,0,0,0.18006109403131,0.646793418913773,0,0,1.07021290561242,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.241251699712623,0.238744688006273,0,0,0.18542530201051,0,0.619160603889667,0.740778109478847,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.387479470433193,1.18269287843545,1.05621514781179,0,0,0,0,0,1.21635129174099,0.718976700153791,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,1.12950368523413,1.84130094602871,1.14579102687879,1.03111909406213,2.74033007908257,0,0,2.70192721934532,0.453142408984205,3.10656187051092,0.31136204275253,0,0.512200817262403,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.565879024158229,0.37456602987953,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0.789209134313529,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0,0,0.382576664137687,0.220591419119515,0 | |phase1_expression=16.1750335575842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,0.945041568321835,0.630974884054146,4.28476476605705,3.75476519617743,0.489963196859816,0.575072826109418,0,2.20231761998777,1.0214987046815,1.53606533256243,0.659431438650969,1.00636407962651,2.08365348222704,2.23346399201105,1.12552522006336,1.83357897332172,4.41942878210502,1.85083185038834,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.323533699894818,0.441683036920787,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0.457500602818626,0.753926112677186,0.869121600961382,0.767146371990992,0.83115217823824,0.486723789203273,1.32391173005411,0,0,0,0.390361328888111,0,0,0.60281927134286,0.204109497453984,0,0.281105173679186,0,0.431135985865684,0.567318240503458,0,0.43839146485515,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0,0,0,1.98068267607116,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0.420579897128254,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.189667900953082,0.913988100877831,1.1270773567308,0.203651327845314,0,0.561086559122548,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.468846746368813,4.09837363441689,0,0.315508219416257,0.390438744296638,0,0.716906393857656,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,1.06839362200353,1.14020871547503,0,0,1.21390318077491,1.51161778482376,0.943025398779491,0,0,0.258428293168221,0.363533729477506,1.42598951353889,0,0,0,0,0.18006109403131,0.646793418913773,0,0,1.07021290561242,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.241251699712623,0.238744688006273,0,0,0.18542530201051,0,0.619160603889667,0.740778109478847,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0,0,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.387479470433193,1.18269287843545,1.05621514781179,0,0,0,0,0,1.21635129174099,0.718976700153791,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,1.12950368523413,1.84130094602871,1.14579102687879,1.03111909406213,2.74033007908257,0,0,2.70192721934532,0.453142408984205,3.10656187051092,0.31136204275253,0,0.512200817262403,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0.565879024158229,0.37456602987953,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.338458431566706,0.182927972872773,0.789209134313529,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0,0,0.382576664137687,0.220591419119515,0 | ||
|short_description=p6@uc009biz.1 | |short_description=p6@uc009biz.1 | ||
}} | }} |
Latest revision as of 15:20, 5 August 2015
Short description: | p6@uc009biz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_uc009biz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:471 |
Association with transcript: | -162bp_to_uc009biz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.14e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-23 | 23 |
neuron | 1.65e-17 | 33 |
neuronal stem cell | 1.65e-17 | 33 |
neuroblast | 1.65e-17 | 33 |
electrically signaling cell | 1.65e-17 | 33 |
ectodermal cell | 1.22e-15 | 44 |
neurectodermal cell | 1.22e-15 | 44 |
neural cell | 3.40e-14 | 43 |
electrically responsive cell | 3.48e-14 | 39 |
electrically active cell | 3.48e-14 | 39 |
neuron of the ventral spinal cord | 2.32e-08 | 3 |
embryonic cell | 3.62e-08 | 70 |
neuron of the substantia nigra | 1.12e-07 | 3 |
raphe nuclei neuron | 1.62e-07 | 3 |