FFCP PHASE1:Mm9::chr8:33028824..33028840,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211323 | |EntrezGene=211323 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2481 | |||
|TSSclassifier=NA | |||
|UniProt=Q6DR99,Q3URY7 | |UniProt=Q6DR99,Q3URY7 | ||
|association_with_transcript=-149bp_to_ENSMUST00000073884,NM_178591,uc009ljo.1,uc009ljq.1,uc009ljs.1_5end | |association_with_transcript=-149bp_to_ENSMUST00000073884,NM_178591,uc009ljo.1,uc009ljq.1,uc009ljs.1_5end | ||
|cluster_id=chr8:33028824..33028840,- | |||
|description=CAGE_peak_2_at_Nrg1_5end | |description=CAGE_peak_2_at_Nrg1_5end | ||
|id=chr8:33028824..33028840,- | |id=chr8:33028824..33028840,- | ||
|ontology_enrichment_celltype=CL:0000055!9.40e-16!50;CL:0002319!4.57e-15!43;CL:0000221!5.96e-15!44;CL:0000133!5.96e-15!44;CL:0000393!3.30e-13!39;CL:0000211!3.30e-13!39;CL:0000117!1.49e-12!23;CL:0000337!1.49e-12!23;CL:0000540!9.52e-12!33;CL:0000047!9.52e-12!33;CL:0000031!9.52e-12!33;CL:0000404!9.52e-12!33;CL:0002321!3.13e-07!70;CL:0000220!3.13e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.56e-21,43;CL:0000221,8.51e-21,44;CL:0000133,8.51e-21,44;CL:0000117,3.73e-19,23;CL:0000337,3.73e-19,23;CL:0000393,1.78e-18,39;CL:0000211,1.78e-18,39;CL:0000540,5.20e-18,33;CL:0000047,5.20e-18,33;CL:0000031,5.20e-18,33;CL:0000404,5.20e-18,33;CL:0002321,5.72e-14,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.47e-30!73;UBERON:0005743!7.47e-30!73;UBERON:0000073!1.09e-29!75;UBERON:0001016!1.09e-29!75;UBERON:0004121!7.30e-28!102;UBERON:0000924!7.30e-28!102;UBERON:0006601!7.30e-28!102;UBERON:0001049!6.43e-24!52;UBERON:0005068!6.43e-24!52;UBERON:0006241!6.43e-24!52;UBERON:0007135!6.43e-24!52;UBERON:0002346!5.83e-23!71;UBERON:0003075!5.83e-23!71;UBERON:0007284!5.83e-23!71;UBERON:0000955!5.39e-22!50;UBERON:0006238!5.39e-22!50;UBERON:0002616!1.44e-21!49;UBERON:0000033!1.08e-19!63;UBERON:0003080!3.57e-16!40;UBERON:0002780!1.72e-15!39;UBERON:0001890!1.72e-15!39;UBERON:0006240!1.72e-15!39;UBERON:0002020!1.81e-15!34;UBERON:0003056!6.05e-15!49;UBERON:0002791!3.17e-12!29;UBERON:0003528!3.17e-12!29;UBERON:0001893!3.17e-12!29;UBERON:0000956!9.41e-09!21;UBERON:0001869!9.41e-09!21;UBERON:0000203!9.41e-09!21;UBERON:0007811!1.15e-08!86;UBERON:0003076!1.51e-08!12;UBERON:0003057!1.51e-08!12;UBERON:0000025!5.70e-08!114;UBERON:0004111!6.90e-08!122;UBERON:0002619!1.19e-07!17;UBERON:0000153!3.81e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.03e-43,73;UBERON:0001016,9.03e-42,75;UBERON:0000073,7.85e-35,54;UBERON:0001049,9.47e-33,52;UBERON:0005068,9.47e-33,52;UBERON:0006241,9.47e-33,52;UBERON:0007135,9.47e-33,52;UBERON:0004121,1.67e-30,95;UBERON:0000924,1.67e-30,95;UBERON:0006601,1.67e-30,95;UBERON:0002346,1.20e-29,64;UBERON:0003075,1.20e-29,64;UBERON:0007284,1.20e-29,64;UBERON:0000955,2.61e-26,47;UBERON:0006238,2.61e-26,47;UBERON:0002616,1.37e-25,46;UBERON:0010371,3.98e-24,73;UBERON:0002020,7.58e-22,34;UBERON:0003080,7.13e-21,40;UBERON:0002780,9.51e-20,39;UBERON:0001890,9.51e-20,39;UBERON:0006240,9.51e-20,39;UBERON:0010314,5.52e-17,92;UBERON:0003056,1.90e-16,49;UBERON:0003528,2.45e-16,29;UBERON:0002791,2.45e-16,29;UBERON:0001893,2.45e-16,29;UBERON:0003076,1.21e-12,12;UBERON:0003057,1.21e-12,12;UBERON:0000956,3.89e-11,21;UBERON:0001869,3.89e-11,21;UBERON:0000203,3.89e-11,21;UBERON:0000025,1.52e-10,114;UBERON:0002619,5.19e-10,17;UBERON:0004111,1.29e-09,122;UBERON:0011216,3.49e-09,194;UBERON:0002240,1.65e-08,6;UBERON:0005174,1.65e-08,6;UBERON:0001137,1.65e-08,6;UBERON:0001948,3.17e-07,5;UBERON:0002315,3.17e-07,5;UBERON:0000923,7.57e-07,291;UBERON:0010316,7.57e-07,291;UBERON:0005291,7.57e-07,291;UBERON:0006598,7.57e-07,291;UBERON:0010317,7.57e-07,291;UBERON:0002532,7.57e-07,291 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,1.76469446409304,0.683045484958446,0,3.52511090331616,2.83855407414641,2.20256102594018,0.782391344348039,5.01457859675027,2.85592037554813,6.22175677037707,1.1198913730029,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,2.42779753031517,4.23192783417626,3.1691570175309,0,0,0.449949858640699,1.97773272513395,0,2.09720077362883,1.53687322128622,1.76272340924412,1.35005938331691,0.630974884054146,3.71346279724945,3.3130281142742,1.71487118900936,3.54628242767475,2.75765635983006,8.8092704799511,2.68143409978894,2.91852413186863,0.527545150920775,2.01272815925301,1.04182674111352,5.58365998002762,5.06486349028512,3.66715794664344,8.2496003932627,5.69486723196412,4.47358669980721,0.37863096666592,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0.865964164044856,1.52015919285059,2.02209778005913,0.5709193985953,0,0.742210695324124,0.693941307064543,0,0.691846491768175,0.753613202763113,0.940709657085638,0,0.741584903203122,0,0,0.161766849947409,0,0,0,3.51336956413857,2.72280718857492,0,0,0,0.127070227073065,5.84183493678809,2.28750301409313,2.63874139437015,1.73824320192276,2.30143911597297,4.98691306942944,3.0825839982874,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.650602214813519,0.689706313300419,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,2.06962696591213,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,1.39323986772945,0,0.257347907114715,0.284163499395593,1.24275463521301,0.469052119962192,0.180062061461015,0.946978942340841,0,0.462801338662135,0.232533944750408,0,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,3.19004298375782,0,0.528901133327089,1.06644125267617,2.09013004674395,0.257734922644187,0.80673409849337,1.11189021922435,0.190225626112559,0.949058123089023,0.658795818896044,0,0.795825888164603,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0,0.296452627087149,0.500535317148282,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0.551873492609465,11.2385412991454,6.32943107597897,0.163934945376675,0,2.83957397474631,1.17131623288992,1.50796378412959,0,0.445597348164788,0.283076530788832,1.61924280669958,2.04579100537918,0,1.60660658210904,0.283880170416537,0.178065603667255,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,2.04263763452273,0.900305470156551,0.905510786479282,1.07168517515796,0.177340233642274,1.60531935841864,3.1264313914403,2.13125464380219,0,0,0.220528398054962,0.32977250588296,0,0.361877549568935,0.835606408021955,0.984845398470368,0,10.9400928186201,0,0.412773735926445,0.925972636848558,0,0.27338845544205,0,0,0,0,0,0.474503990371703,0.406638934253697,0.540026704109006,0,1.31017538247707,0.944050424693745,0.247960367176008,0,0.90730481304255,0,0,1.04661582230785,1.32366792365678,4.4723773319131,3.61647505737647,5.91346439217724,7.51086327332825,1.17183946359555,0.209718688851422,0,0,0,0,0,0.25984164595559,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0.906921534460845,0,0,0,0.579568782096571,0.187682475451182,1.09890974560359,1.71494703263253,0,2.25900737046827,1.38097570952153,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,1.80128481289688,2.71885445390523,0.51776031175182,1.03787347584177,0,0.682934423016537,0.486213434136588,0.838452650511929,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.943131706930381,0.187283014939765,0.640251524048693,0.574354689556133,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.726732083161643,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,1.06771516311757,0.394017929502254,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,0,0.382576664137687,0.661774257358546,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,1.76469446409304,0.683045484958446,0,3.52511090331616,2.83855407414641,2.20256102594018,0.782391344348039,5.01457859675027,2.85592037554813,6.22175677037707,1.1198913730029,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,2.42779753031517,4.23192783417626,3.1691570175309,0,0,0.449949858640699,1.97773272513395,0,2.09720077362883,1.53687322128622,1.76272340924412,1.35005938331691,0.630974884054146,3.71346279724945,3.3130281142742,1.71487118900936,3.54628242767475,2.75765635983006,8.8092704799511,2.68143409978894,2.91852413186863,0.527545150920775,2.01272815925301,1.04182674111352,5.58365998002762,5.06486349028512,3.66715794664344,8.2496003932627,5.69486723196412,4.47358669980721,0.37863096666592,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0.865964164044856,1.52015919285059,2.02209778005913,0.5709193985953,0,0.742210695324124,0.693941307064543,0,0.691846491768175,0.753613202763113,0.940709657085638,0,0.741584903203122,0,0,0.161766849947409,0,0,0,3.51336956413857,2.72280718857492,0,0,0,0.127070227073065,5.84183493678809,2.28750301409313,2.63874139437015,1.73824320192276,2.30143911597297,4.98691306942944,3.0825839982874,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.650602214813519,0.689706313300419,0.180062129805349,0.30140963567143,0.204109497453984,0.512454881139399,0.187403449119458,2.06962696591213,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,1.39323986772945,0,0.257347907114715,0.284163499395593,1.24275463521301,0.469052119962192,0.180062061461015,0.946978942340841,0,0.462801338662135,0.232533944750408,0,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,3.19004298375782,0,0.528901133327089,1.06644125267617,2.09013004674395,0.257734922644187,0.80673409849337,1.11189021922435,0.190225626112559,0.949058123089023,0.658795818896044,0,0.795825888164603,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0,0.296452627087149,0.500535317148282,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0.551873492609465,11.2385412991454,6.32943107597897,0.163934945376675,0,2.83957397474631,1.17131623288992,1.50796378412959,0,0.445597348164788,0.283076530788832,1.61924280669958,2.04579100537918,0,1.60660658210904,0.283880170416537,0.178065603667255,0.81443479676788,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,2.04263763452273,0.900305470156551,0.905510786479282,1.07168517515796,0.177340233642274,1.60531935841864,3.1264313914403,2.13125464380219,0,0,0.220528398054962,0.32977250588296,0,0.361877549568935,0.835606408021955,0.984845398470368,0,10.9400928186201,0,0.412773735926445,0.925972636848558,0,0.27338845544205,0,0,0,0,0,0.474503990371703,0.406638934253697,0.540026704109006,0,1.31017538247707,0.944050424693745,0.247960367176008,0,0.90730481304255,0,0,1.04661582230785,1.32366792365678,4.4723773319131,3.61647505737647,5.91346439217724,7.51086327332825,1.17183946359555,0.209718688851422,0,0,0,0,0,0.25984164595559,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0.906921534460845,0,0,0,0.579568782096571,0.187682475451182,1.09890974560359,1.71494703263253,0,2.25900737046827,1.38097570952153,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,1.80128481289688,2.71885445390523,0.51776031175182,1.03787347584177,0,0.682934423016537,0.486213434136588,0.838452650511929,0.367687016900028,0.222246727801615,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.943131706930381,0.187283014939765,0.640251524048693,0.574354689556133,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.726732083161643,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,1.06771516311757,0.394017929502254,0.818462086339379,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,0,0.382576664137687,0.661774257358546,0 | ||
|short_description=p2@Nrg1 | |short_description=p2@Nrg1 | ||
}} | }} |
Latest revision as of 21:55, 1 October 2015
Short description: | p2@Nrg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nrg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2481 |
Association with transcript: | -149bp_to_ENSMUST00000073884, NM_178591, uc009ljo.1, uc009ljq.1, uc009ljs.1_5end |
EntrezGene: | Nrg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.56e-21 | 43 |
ectodermal cell | 8.51e-21 | 44 |
neurectodermal cell | 8.51e-21 | 44 |
CNS neuron (sensu Vertebrata) | 3.73e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.73e-19 | 23 |
electrically responsive cell | 1.78e-18 | 39 |
electrically active cell | 1.78e-18 | 39 |
neuron | 5.20e-18 | 33 |
neuronal stem cell | 5.20e-18 | 33 |
neuroblast | 5.20e-18 | 33 |
electrically signaling cell | 5.20e-18 | 33 |
embryonic cell | 5.72e-14 | 70 |