FFCP PHASE1:Mm9::chr16:93712197..93712253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70028 | |EntrezGene=70028 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=789 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UHQ6,Q9DCG4,Q6PGE1 | |UniProt=Q3UHQ6,Q9DCG4,Q6PGE1 | ||
|association_with_transcript=45bp_to_ENSMUST00000045004,NM_026700,NM_027293,uc007zzt.1,uc007zzu.1,uc007zzv.1_5end | |association_with_transcript=45bp_to_ENSMUST00000045004,NM_026700,NM_027293,uc007zzt.1,uc007zzu.1,uc007zzv.1_5end | ||
|cluster_id=chr16:93712197..93712253,+ | |||
|description=CAGE_peak_1_at_Dopey2_5end | |description=CAGE_peak_1_at_Dopey2_5end | ||
|id=chr16:93712197..93712253,+ | |id=chr16:93712197..93712253,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.84e-14!51;UBERON:0004119!5.09e-13!130;UBERON:0000925!5.09e-13!130;UBERON:0006595!5.09e-13!130;UBERON:0001007!7.25e-13!128;UBERON:0001555!7.25e-13!128;UBERON:0007026!7.25e-13!128;UBERON:0004921!3.37e-12!126;UBERON:0004185!3.37e-12!126;UBERON:0005409!4.58e-09!59;UBERON:0000160!7.72e-07!43 | |ontology_enrichment_uberon=UBERON:0007023!1.84e-14!51;UBERON:0004119!5.09e-13!130;UBERON:0000925!5.09e-13!130;UBERON:0006595!5.09e-13!130;UBERON:0001007!7.25e-13!128;UBERON:0001555!7.25e-13!128;UBERON:0007026!7.25e-13!128;UBERON:0004921!3.37e-12!126;UBERON:0004185!3.37e-12!126;UBERON:0005409!4.58e-09!59;UBERON:0000160!7.72e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.38e-14,118;UBERON:0000925,1.38e-14,118;UBERON:0006595,1.38e-14,118;UBERON:0007023,1.84e-14,51;UBERON:0001007,1.90e-14,116;UBERON:0001555,1.90e-14,116;UBERON:0007026,1.90e-14,116;UBERON:0004921,9.59e-14,114;UBERON:0005409,7.92e-12,47;UBERON:0000160,6.59e-10,31 | |||
|phase1_expression=3.04282809499109,41.8770489167233,32.3049459966571,84.9924433772192,86.6549612807181,24.6782529710478,29.4351927150362,6.19791952519566,25.4827587094517,39.5569049484169,10.1018601253048,9.09402612546835,23.6257007305064,10.9275503023747,15.6561588053361,21.8673288781012,16.0899231969474,13.7226041930833,10.2835825204304,11.8829102503448,8.67441559540912,3.27660138962921,0.783599367416806,29.5985982167802,18.5821517664408,25.8404383851759,28.861053742658,24.9946629915631,30.5937705324762,26.2111334950328,12.4169085966971,5.71527606113668,6.1506478758457,0,14.1537293678125,7.97926297720763,10.2084678131185,46.4570110117968,31.253413780952,28.2702821745851,56.4702228509774,70.3536849507199,32.0436833000561,4.02869817521847,3.4468156614635,2.20256102594018,0.782391344348039,1.30815093828268,2.85592037554813,3.30530828426282,1.25987779462826,2.87505128729943,5.03347818173209,22.4862264023517,24.8709411365423,5.14518872071894,4.29800159908135,4.12537673821954,6.27181028664753,6.87688273053643,11.4089652631112,1.69422266034566,0,6.29929802096979,11.8663963508037,8.5257613793532,3.89480143673926,4.61061966385865,5.28817022773236,6.75029691658453,6.73039876324422,9.14083150092171,8.61387309711293,4.77714116938321,3.73797336971122,3.67687514644008,5.50579404996943,6.51205424234457,7.83393319606842,6.4624280987795,6.67859798297591,4.68822033501084,7.53794097303729,5.06486349028512,7.18151764551008,11.490514833473,9.25415925194169,6.33758115806022,1.8931548333296,1.28471652181535,69.5674772884027,13.7667820317022,15.6393406752783,16.1910957491345,35.0879265421741,29.5697745484241,13.9039975930434,2.55645483867087,1.81850203222008,3.18005617059306,6.05626705039726,6.41632387071589,5.09610479413291,7.11066703153331,4.76280290224671,4.56047757855178,7.58286667522175,16.8992141984209,24.5990989464813,12.4691396814453,4.68410382268567,5.78484408793068,5.07354093963329,6.33035090321015,7.4080885495494,6.40899615781345,23.7307169024999,25.1602881040646,32.7305904221453,8.41187619726528,11.4837589599405,16.4857586065976,70.8288692628864,30.1564220921894,25.9713916448684,53.9014386490128,2.87556298814209,2.39961092397363,2.1601938602421,17.2259235315546,36.6000482254901,11.8115090986093,24.3354048269187,19.6900902144355,19.3242881440391,15.0884374653015,7.73979165262404,18.5366386209039,27.7995034277042,23.1486041475121,2.86264974517948,3.21862946206862,5.58192602396583,6.0281927134286,6.73561341598146,6.53379973452734,6.37171727006156,13.9699820199068,0.862271971731369,4.53854592402766,6.15828934573821,5.04150184583422,5.83899223373756,16.3678518265418,19.7550850951626,4.17971960318836,0,2.57347907114715,1.42081749697796,2.48550927042602,1.87620847984877,2.70093092191522,3.55117103377815,4.32881309844288,4.62801338662135,6.0458825635106,8.04820204198858,5.83826711835847,6.58239399653922,10.342550236983,16.2137619091711,14.6199987425332,12.953456802172,15.5679445762031,25.6553737248235,11.5253165864799,159.922690964158,34.9074747995878,2.98603550749328,3.94802342162745,11.7269389803105,16.9414160683608,15.7888411129858,23.7782032640699,43.6566736620951,23.8813484349816,28.6522138032307,31.0372096384195,33.3388588973695,59.3220809711786,60.3025159150397,48.5904706740656,3.79335801906163,4.45569199177942,5.63538678365402,5.09128319613286,5.23671715352589,6.87331034925122,9.42224403151434,9.29943932271494,9.26292494264111,5.92306386824642,26.0878311836691,9.51017102581736,9.63139076054695,10.3436571697033,19.6774317746848,19.0529956204409,16.0414286622294,16.1109836972454,11.9980067813526,7.96228098245436,8.62609239164127,18.2349064357567,14.6657706363843,20.7114679916632,15.0693827358406,25.0870631108951,39.5371826956534,2.84237117655727,4.07412441105065,7.46878377410828,7.97946844180907,17.7556632888325,25.9467568565755,20.6841666729267,27.7437853626896,21.2606102062824,27.1073106717728,35.5583392933151,22.6217326244323,33.2692834737477,6.03165135757089,10.8781136763742,8.85175691434265,15.1765210467603,14.1284519189257,12.7760738385501,1.63934945376675,18.935319540328,1.57754109708128,2.34263246577983,2.80050417052639,3.10659437338318,1.11399337041197,1.98153571552183,2.02405350837447,4.09158201075837,3.55759000151871,12.2102100240287,15.329529202493,9.79360820169904,8.30723492703238,16.9919226661712,7.96470830039777,7.04063844849446,3.62788268357701,5.65815239267694,9.7449624650655,9.22305443831782,12.4045580720746,13.0872142611902,12.4774082434652,7.9009189483954,7.37930260024991,12.3762651897824,26.2138496430417,3.6012218806262,4.01011919726539,4.92975180572662,5.32020700926821,6.77801506887868,6.58196082408484,11.8741330154694,12.2029288193129,13.3454204644207,38.5924696596183,34.4612268647693,17.4381580831578,17.3701223793089,18.383340976483,31.3509118513067,44.5965680043672,17.2445530869774,22.042343622923,7.63631411463923,11.2968661695524,15.6345819313894,25.2884321283897,19.6749228957609,9.68877050964975,9.79660166265606,5.2515990045681,35.3228128665592,3.79603192297362,8.74273708645449,10.8005340821801,16.7270636811575,22.7097066296025,23.6012606173436,30.0858578840223,33.7665165159398,44.457935839085,50.9498236731279,1.69107881605257,3.73791365109947,2.81279433777066,5.05573089694524,4.77891346867605,5.91346439217724,6.33729088687071,6.51021924219751,3.8797957437513,2.65742532908607,3.45636007509439,17.0646005139216,2.02725215290164,3.69759445793378,4.67714962720062,2.68540043501222,5.76175928865668,6.97133607215819,8.4183030489509,8.88504759543699,8.15412831208498,9.47766140286301,11.79240356951,11.0643617886379,13.6745975552436,24.2601510468276,0.443971906748129,1.16628013592318,2.01461539636894,19.5121489972512,23.8356743823001,15.7510396869848,22.2943114242228,36.1131914905462,24.8490810751509,15.1907328047368,17.7597609166213,14.6075204992134,12.3314853558716,21.1510291269116,20.925697507186,25.2179873805563,19.4851235863208,24.8524949640874,2.07574695168353,4.38927360741134,4.09760653809922,13.1277627216879,6.91723436672342,9.00833191405069,10.6678429344775,12.1560683770948,9.94849549734627,12.3821633764261,9.88569269571935,10.9403278003924,8.61501868722918,11.0123262136375,11.142480977389,17.1465728861907,11.4725482685407,11.5745532278223,9.47797571847605,9.56792980873583,12.0004238334895,13.665637074269,10.2527561677348,11.3370204973216,10.7284693673477,11.4229720653763,15.0000937755674,11.0489278803894,9.2346797415186,16.8342681497322,11.1516917036724,11.7220334026921,10.2307760792422,10.8455788830176,14.2750892126045,17.4867404556562,14.7376913320607,15.9004579995741,11.6685882561994,13.2354851471709,14.1439379728457 | |phase1_expression=3.04282809499109,41.8770489167233,32.3049459966571,84.9924433772192,86.6549612807181,24.6782529710478,29.4351927150362,6.19791952519566,25.4827587094517,39.5569049484169,10.1018601253048,9.09402612546835,23.6257007305064,10.9275503023747,15.6561588053361,21.8673288781012,16.0899231969474,13.7226041930833,10.2835825204304,11.8829102503448,8.67441559540912,3.27660138962921,0.783599367416806,29.5985982167802,18.5821517664408,25.8404383851759,28.861053742658,24.9946629915631,30.5937705324762,26.2111334950328,12.4169085966971,5.71527606113668,6.1506478758457,0,14.1537293678125,7.97926297720763,10.2084678131185,46.4570110117968,31.253413780952,28.2702821745851,56.4702228509774,70.3536849507199,32.0436833000561,4.02869817521847,3.4468156614635,2.20256102594018,0.782391344348039,1.30815093828268,2.85592037554813,3.30530828426282,1.25987779462826,2.87505128729943,5.03347818173209,22.4862264023517,24.8709411365423,5.14518872071894,4.29800159908135,4.12537673821954,6.27181028664753,6.87688273053643,11.4089652631112,1.69422266034566,0,6.29929802096979,11.8663963508037,8.5257613793532,3.89480143673926,4.61061966385865,5.28817022773236,6.75029691658453,6.73039876324422,9.14083150092171,8.61387309711293,4.77714116938321,3.73797336971122,3.67687514644008,5.50579404996943,6.51205424234457,7.83393319606842,6.4624280987795,6.67859798297591,4.68822033501084,7.53794097303729,5.06486349028512,7.18151764551008,11.490514833473,9.25415925194169,6.33758115806022,1.8931548333296,1.28471652181535,69.5674772884027,13.7667820317022,15.6393406752783,16.1910957491345,35.0879265421741,29.5697745484241,13.9039975930434,2.55645483867087,1.81850203222008,3.18005617059306,6.05626705039726,6.41632387071589,5.09610479413291,7.11066703153331,4.76280290224671,4.56047757855178,7.58286667522175,16.8992141984209,24.5990989464813,12.4691396814453,4.68410382268567,5.78484408793068,5.07354093963329,6.33035090321015,7.4080885495494,6.40899615781345,23.7307169024999,25.1602881040646,32.7305904221453,8.41187619726528,11.4837589599405,16.4857586065976,70.8288692628864,30.1564220921894,25.9713916448684,53.9014386490128,2.87556298814209,2.39961092397363,2.1601938602421,17.2259235315546,36.6000482254901,11.8115090986093,24.3354048269187,19.6900902144355,19.3242881440391,15.0884374653015,7.73979165262404,18.5366386209039,27.7995034277042,23.1486041475121,2.86264974517948,3.21862946206862,5.58192602396583,6.0281927134286,6.73561341598146,6.53379973452734,6.37171727006156,13.9699820199068,0.862271971731369,4.53854592402766,6.15828934573821,5.04150184583422,5.83899223373756,16.3678518265418,19.7550850951626,4.17971960318836,0,2.57347907114715,1.42081749697796,2.48550927042602,1.87620847984877,2.70093092191522,3.55117103377815,4.32881309844288,4.62801338662135,6.0458825635106,8.04820204198858,5.83826711835847,6.58239399653922,10.342550236983,16.2137619091711,14.6199987425332,12.953456802172,15.5679445762031,25.6553737248235,11.5253165864799,159.922690964158,34.9074747995878,2.98603550749328,3.94802342162745,11.7269389803105,16.9414160683608,15.7888411129858,23.7782032640699,43.6566736620951,23.8813484349816,28.6522138032307,31.0372096384195,33.3388588973695,59.3220809711786,60.3025159150397,48.5904706740656,3.79335801906163,4.45569199177942,5.63538678365402,5.09128319613286,5.23671715352589,6.87331034925122,9.42224403151434,9.29943932271494,9.26292494264111,5.92306386824642,26.0878311836691,9.51017102581736,9.63139076054695,10.3436571697033,19.6774317746848,19.0529956204409,16.0414286622294,16.1109836972454,11.9980067813526,7.96228098245436,8.62609239164127,18.2349064357567,14.6657706363843,20.7114679916632,15.0693827358406,25.0870631108951,39.5371826956534,2.84237117655727,4.07412441105065,7.46878377410828,7.97946844180907,17.7556632888325,25.9467568565755,20.6841666729267,27.7437853626896,21.2606102062824,27.1073106717728,35.5583392933151,22.6217326244323,33.2692834737477,6.03165135757089,10.8781136763742,8.85175691434265,15.1765210467603,14.1284519189257,12.7760738385501,1.63934945376675,18.935319540328,1.57754109708128,2.34263246577983,2.80050417052639,3.10659437338318,1.11399337041197,1.98153571552183,2.02405350837447,4.09158201075837,3.55759000151871,12.2102100240287,15.329529202493,9.79360820169904,8.30723492703238,16.9919226661712,7.96470830039777,7.04063844849446,3.62788268357701,5.65815239267694,9.7449624650655,9.22305443831782,12.4045580720746,13.0872142611902,12.4774082434652,7.9009189483954,7.37930260024991,12.3762651897824,26.2138496430417,3.6012218806262,4.01011919726539,4.92975180572662,5.32020700926821,6.77801506887868,6.58196082408484,11.8741330154694,12.2029288193129,13.3454204644207,38.5924696596183,34.4612268647693,17.4381580831578,17.3701223793089,18.383340976483,31.3509118513067,44.5965680043672,17.2445530869774,22.042343622923,7.63631411463923,11.2968661695524,15.6345819313894,25.2884321283897,19.6749228957609,9.68877050964975,9.79660166265606,5.2515990045681,35.3228128665592,3.79603192297362,8.74273708645449,10.8005340821801,16.7270636811575,22.7097066296025,23.6012606173436,30.0858578840223,33.7665165159398,44.457935839085,50.9498236731279,1.69107881605257,3.73791365109947,2.81279433777066,5.05573089694524,4.77891346867605,5.91346439217724,6.33729088687071,6.51021924219751,3.8797957437513,2.65742532908607,3.45636007509439,17.0646005139216,2.02725215290164,3.69759445793378,4.67714962720062,2.68540043501222,5.76175928865668,6.97133607215819,8.4183030489509,8.88504759543699,8.15412831208498,9.47766140286301,11.79240356951,11.0643617886379,13.6745975552436,24.2601510468276,0.443971906748129,1.16628013592318,2.01461539636894,19.5121489972512,23.8356743823001,15.7510396869848,22.2943114242228,36.1131914905462,24.8490810751509,15.1907328047368,17.7597609166213,14.6075204992134,12.3314853558716,21.1510291269116,20.925697507186,25.2179873805563,19.4851235863208,24.8524949640874,2.07574695168353,4.38927360741134,4.09760653809922,13.1277627216879,6.91723436672342,9.00833191405069,10.6678429344775,12.1560683770948,9.94849549734627,12.3821633764261,9.88569269571935,10.9403278003924,8.61501868722918,11.0123262136375,11.142480977389,17.1465728861907,11.4725482685407,11.5745532278223,9.47797571847605,9.56792980873583,12.0004238334895,13.665637074269,10.2527561677348,11.3370204973216,10.7284693673477,11.4229720653763,15.0000937755674,11.0489278803894,9.2346797415186,16.8342681497322,11.1516917036724,11.7220334026921,10.2307760792422,10.8455788830176,14.2750892126045,17.4867404556562,14.7376913320607,15.9004579995741,11.6685882561994,13.2354851471709,14.1439379728457 | ||
|short_description=p1@Dopey2 | |short_description=p1@Dopey2 | ||
}} | }} |
Latest revision as of 21:21, 25 September 2015
Short description: | p1@Dopey2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dopey2_5end |
Coexpression cluster: | MCL_coexpression_mm9:789 |
Association with transcript: | 45bp_to_ENSMUST00000045004, NM_026700, NM_027293, uc007zzt.1, uc007zzu.1, uc007zzv.1_5end |
EntrezGene: | Dopey2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.38e-14 | 118 |
endoderm | 1.38e-14 | 118 |
presumptive endoderm | 1.38e-14 | 118 |
adult organism | 1.84e-14 | 51 |
digestive system | 1.90e-14 | 116 |
digestive tract | 1.90e-14 | 116 |
primitive gut | 1.90e-14 | 116 |
subdivision of digestive tract | 9.59e-14 | 114 |
gastrointestinal system | 7.92e-12 | 47 |
intestine | 6.59e-10 | 31 |