FFCP PHASE1:Mm9::chr6:117123725..117123738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117123725..117123738,+ | |||
|description=CAGE_peak_at_chr6:117123725..117123738,+ | |description=CAGE_peak_at_chr6:117123725..117123738,+ | ||
|id=chr6:117123725..117123738,+ | |id=chr6:117123725..117123738,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.20e-18,3;CL:0000359,7.20e-18,3;CL:0002539,7.20e-18,3;CL:0000514,7.20e-18,3;CL:0000680,3.35e-15,6;CL:0000187,3.35e-15,6;CL:0000056,3.35e-15,6;CL:0000222,4.58e-13,7;CL:0000355,3.28e-10,9;CL:0002293,3.05e-08,3;CL:0000057,8.98e-07,1;CL:0000632,8.98e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.20e-18,3;UBERON:0004237,7.20e-18,3;UBERON:0004695,7.20e-18,3;UBERON:0002111,7.20e-18,3;UBERON:0004178,7.20e-18,3;UBERON:0000947,1.50e-13,4;UBERON:0001637,1.50e-13,4;UBERON:0004573,1.50e-13,4;UBERON:0003509,1.50e-13,4;UBERON:0004571,1.50e-13,4;UBERON:0010191,1.50e-13,4;UBERON:0004572,1.50e-13,4;UBERON:0000055,5.98e-11,5;UBERON:0007500,5.98e-11,5;UBERON:0001981,5.98e-11,5;UBERON:0002049,5.98e-11,5;UBERON:0007798,5.98e-11,5;UBERON:0004537,5.98e-11,5;UBERON:0006965,5.98e-11,5;UBERON:0001134,3.28e-10,9;UBERON:0002036,3.28e-10,9;UBERON:0002385,3.28e-10,9;UBERON:0000486,3.28e-10,9;UBERON:0007503,3.28e-10,9;UBERON:0001015,3.28e-10,9;UBERON:0002329,3.28e-10,9;UBERON:0003082,3.28e-10,9;UBERON:0003059,3.28e-10,9;UBERON:0007282,3.28e-10,9;UBERON:0004290,3.28e-10,9;UBERON:0009618,3.28e-10,9;UBERON:0000383,3.30e-09,10;UBERON:0007524,2.19e-08,11;UBERON:0003077,2.19e-08,11;UBERON:0007285,2.19e-08,11;UBERON:0000490,4.61e-07,66;UBERON:0005256,5.70e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,4.8660926985367,6.05704282133549,2.34717403304412,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0,0,1.72084775396277,0,1.07940638327563,0,0.448026887097336,0,11.0779709675738,25.4590284510811,17.666978725517,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0,1.45462575940567,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0.597423819763102,0.569003702859245,0,0,0,0,0.350679099451593,0,0,0.470996183524124,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0,0.505157755894224,0,1.92977408545347,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.484393280087717,0.180938774784468,0,0,0,0,0.170870880797853,1.03193433981611,0.740778109478847,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.904118764344118,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0,0,0,0.513554785824136,0.77952493786677,0,0,0.240390899039938,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0.584384510907845,0.906921534460845,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0.882365676478062,0.231867835620421 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,4.8660926985367,6.05704282133549,2.34717403304412,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0.427115042397309,0.186399445825301,0,0,0,1.72084775396277,0,1.07940638327563,0,0.448026887097336,0,11.0779709675738,25.4590284510811,17.666978725517,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0,1.45462575940567,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.210289948564127,0,0,0,0,0.232236671860439,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0.597423819763102,0.569003702859245,0,0,0,0,0.350679099451593,0,0,0.470996183524124,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0.372140947668503,0,0.505157755894224,0,1.92977408545347,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.484393280087717,0.180938774784468,0,0,0,0,0.170870880797853,1.03193433981611,0.740778109478847,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.904118764344118,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0,0,0,0.513554785824136,0.77952493786677,0,0,0.240390899039938,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0.584384510907845,0.906921534460845,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0.882365676478062,0.231867835620421 | ||
|short_description=p@chr6:117123725..117123738,+ | |short_description=p@chr6:117123725..117123738,+ | ||
}} | }} |
Latest revision as of 23:34, 4 August 2015
Short description: | p@chr6:117123725..117123738, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117123725..117123738, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.20e-18 | 3 |
vascular associated smooth muscle cell | 7.20e-18 | 3 |
aortic smooth muscle cell | 7.20e-18 | 3 |
smooth muscle myoblast | 7.20e-18 | 3 |
muscle precursor cell | 3.35e-15 | 6 |
muscle cell | 3.35e-15 | 6 |
myoblast | 3.35e-15 | 6 |
mesodermal cell | 4.58e-13 | 7 |
multi-potent skeletal muscle stem cell | 3.28e-10 | 9 |
epithelial cell of thymus | 3.05e-08 | 3 |
fibroblast | 8.98e-07 | 1 |
hepatic stellate cell | 8.98e-07 | 1 |