FFCP PHASE1:Mm9::chr16:27370300..27370303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224065 | |EntrezGene=224065 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q765I1,Q3V249 | |UniProt=Q765I1,Q3V249 | ||
|association_with_transcript=21bp_to_ENSMUST00000070531,NM_198166,uc007yvm.1_5end | |association_with_transcript=21bp_to_ENSMUST00000070531,NM_198166,uc007yvm.1_5end | ||
|cluster_id=chr16:27370300..27370303,- | |||
|description=CAGE_peak_1_at_Uts2d_5end | |description=CAGE_peak_1_at_Uts2d_5end | ||
|id=chr16:27370300..27370303,- | |id=chr16:27370300..27370303,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,6.51e-17,3;CL:0002611,7.13e-12,2;CL:0000117,5.61e-08,23;CL:0000337,5.61e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.20e-13!18;UBERON:0000948!7.20e-13!18;UBERON:0005498!7.20e-13!18;UBERON:0004140!7.20e-13!18;UBERON:0009881!7.20e-13!18;UBERON:0004141!7.20e-13!18;UBERON:0003084!7.20e-13!18;UBERON:0007005!7.20e-13!18;UBERON:0004139!7.20e-13!18;UBERON:0004291!7.20e-13!18;UBERON:0003103!9.19e-11!43;UBERON:0004535!2.34e-10!23;UBERON:0001009!2.34e-10!23;UBERON:0002240!1.71e-09!6;UBERON:0005174!1.71e-09!6;UBERON:0001137!1.71e-09!6;UBERON:0001948!2.82e-08!5;UBERON:0002315!2.82e-08!5;UBERON:0003076!5.30e-07!12;UBERON:0003057!5.30e-07!12 | |ontology_enrichment_uberon=UBERON:0007100!7.20e-13!18;UBERON:0000948!7.20e-13!18;UBERON:0005498!7.20e-13!18;UBERON:0004140!7.20e-13!18;UBERON:0009881!7.20e-13!18;UBERON:0004141!7.20e-13!18;UBERON:0003084!7.20e-13!18;UBERON:0007005!7.20e-13!18;UBERON:0004139!7.20e-13!18;UBERON:0004291!7.20e-13!18;UBERON:0003103!9.19e-11!43;UBERON:0004535!2.34e-10!23;UBERON:0001009!2.34e-10!23;UBERON:0002240!1.71e-09!6;UBERON:0005174!1.71e-09!6;UBERON:0001137!1.71e-09!6;UBERON:0001948!2.82e-08!5;UBERON:0002315!2.82e-08!5;UBERON:0003076!5.30e-07!12;UBERON:0003057!5.30e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.23e-32,6;UBERON:0005174,9.23e-32,6;UBERON:0001137,9.23e-32,6;UBERON:0001948,4.10e-27,5;UBERON:0002315,4.10e-27,5;UBERON:0003103,1.00e-25,43;UBERON:0003076,6.16e-21,12;UBERON:0003057,6.16e-21,12;UBERON:0007100,1.06e-17,18;UBERON:0000948,1.06e-17,18;UBERON:0005498,1.06e-17,18;UBERON:0004140,1.06e-17,18;UBERON:0009881,1.06e-17,18;UBERON:0004141,1.06e-17,18;UBERON:0003084,1.06e-17,18;UBERON:0007005,1.06e-17,18;UBERON:0004139,1.06e-17,18;UBERON:0004291,1.06e-17,18;UBERON:0002257,6.51e-17,3;UBERON:0004535,1.15e-13,23;UBERON:0001009,1.15e-13,23;UBERON:0010314,1.58e-12,92;UBERON:0000489,7.03e-12,21;UBERON:0002256,7.13e-12,2;UBERON:0004111,2.39e-10,122;UBERON:0000025,1.09e-09,114;UBERON:0004872,3.01e-09,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,3.14216082844184,1.76694832761291,0,0,0,0,0,0,0,0,0,1.11673199600552,0,0,1.76777151284201,2.13557521198654,2.60959224155421,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,1.17263029990548,1.80062061461015,1.65721314909647,1.37734962223183,2.93107514486019,0.697601834251224,2.14618721119695,1.63471479314037,1.31647879930784,0.492502392237286,0.0810688095458557,0.877199924551994,0,0.402619256281115,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,3.14216082844184,1.76694832761291,0,0,0,0,0,0,0,0,0,1.11673199600552,0,0,1.76777151284201,2.13557521198654,2.60959224155421,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,1.17263029990548,1.80062061461015,1.65721314909647,1.37734962223183,2.93107514486019,0.697601834251224,2.14618721119695,1.63471479314037,1.31647879930784,0.492502392237286,0.0810688095458557,0.877199924551994,0,0.402619256281115,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0,0,0,0,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p1@Uts2d | |short_description=p1@Uts2d | ||
}} | }} |
Latest revision as of 20:18, 1 October 2015
Short description: | p1@Uts2d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Uts2d_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENSMUST00000070531, NM_198166, uc007yvm.1_5end |
EntrezGene: | Uts2d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 6.51e-17 | 3 |
neuron of the dorsal spinal cord | 7.13e-12 | 2 |
CNS neuron (sensu Vertebrata) | 5.61e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.61e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.23e-32 | 6 |
dorsal region element | 9.23e-32 | 6 |
dorsum | 9.23e-32 | 6 |
regional part of spinal cord | 4.10e-27 | 5 |
gray matter of spinal cord | 4.10e-27 | 5 |
compound organ | 1.00e-25 | 43 |
posterior neural tube | 6.16e-21 | 12 |
chordal neural plate | 6.16e-21 | 12 |
primary circulatory organ | 1.06e-17 | 18 |
heart | 1.06e-17 | 18 |
primitive heart tube | 1.06e-17 | 18 |
primary heart field | 1.06e-17 | 18 |
anterior lateral plate mesoderm | 1.06e-17 | 18 |
heart tube | 1.06e-17 | 18 |
heart primordium | 1.06e-17 | 18 |
cardiac mesoderm | 1.06e-17 | 18 |
cardiogenic plate | 1.06e-17 | 18 |
heart rudiment | 1.06e-17 | 18 |
ventral horn of spinal cord | 6.51e-17 | 3 |
cardiovascular system | 1.15e-13 | 23 |
circulatory system | 1.15e-13 | 23 |
structure with developmental contribution from neural crest | 1.58e-12 | 92 |
cavitated compound organ | 7.03e-12 | 21 |
dorsal horn of spinal cord | 7.13e-12 | 2 |
anatomical conduit | 2.39e-10 | 122 |
tube | 1.09e-09 | 114 |
splanchnic layer of lateral plate mesoderm | 3.01e-09 | 33 |