FFCP PHASE1:Mm9::chr7:31940697..31940708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=476 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:31940697..31940708,+ | |||
|description=CAGE_peak_at_chr7:31940697..31940708,+ | |description=CAGE_peak_at_chr7:31940697..31940708,+ | ||
|id=chr7:31940697..31940708,+ | |id=chr7:31940697..31940708,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.43e-14!12;CL:0000084!2.03e-13!11;CL:0000827!2.03e-13!11;CL:0000542!5.20e-13!13;CL:0000051!5.20e-13!13;CL:0000738!3.59e-11!17;CL:0002087!3.59e-11!17;CL:0002031!8.30e-11!25;CL:0000791!1.26e-10!9;CL:0000789!1.26e-10!9;CL:0002420!1.26e-10!9;CL:0002419!1.26e-10!9;CL:0000790!1.26e-10!9;CL:0000988!5.95e-10!32;CL:0002032!5.95e-10!32;CL:0000037!5.95e-10!32;CL:0000566!5.95e-10!32;CL:0000837!5.95e-10!32;CL:0000624!4.20e-09!8;CL:0000893!6.21e-07!6;CL:0002489!6.21e-07!6;CL:0000898!6.21e-07!6;CL:0000809!6.21e-07!6;CL:0000810!6.21e-07!6;CL:0000895!6.21e-07!6;CL:0000808!6.21e-07!6;CL:0000894!6.21e-07!6;CL:0000806!6.21e-07!6;CL:0000807!6.21e-07!6;CL:0000805!6.21e-07!6;CL:0002425!6.21e-07!6;CL:0002436!6.21e-07!6;CL:0002427!6.21e-07!6;CL:0002428!6.21e-07!6;CL:0002429!6.21e-07!6;CL:0002433!6.21e-07!6;CL:0002431!6.21e-07!6;CL:0002432!6.21e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.07e-11,11;CL:0000827,4.07e-11,11;CL:0000838,3.26e-10,12;CL:0000542,1.90e-09,13;CL:0000051,1.90e-09,13;CL:0000625,7.41e-09,1;CL:0000791,3.88e-08,9;CL:0000789,3.88e-08,9;CL:0002420,3.88e-08,9;CL:0002419,3.88e-08,9;CL:0000790,3.88e-08,9;CL:0000355,5.72e-08,9;CL:0000738,2.81e-07,17;CL:0002087,2.81e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.10e-22,3;DOID:4045,1.10e-22,3;DOID:0050686,1.13e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.80e-24!29;UBERON:0003408!4.43e-21!24;UBERON:0002193!6.07e-21!48;UBERON:0002390!7.36e-21!45;UBERON:0003061!7.36e-21!45;UBERON:0002370!8.79e-20!23;UBERON:0000974!8.79e-20!23;UBERON:0004807!8.79e-20!23;UBERON:0005058!8.79e-20!23;UBERON:0003351!8.79e-20!23;UBERON:0009113!8.79e-20!23;UBERON:0003295!8.79e-20!23;UBERON:0009722!8.79e-20!23;UBERON:0005562!8.79e-20!23;UBERON:0007690!8.79e-20!23;UBERON:0006562!1.01e-18!24;UBERON:0001557!1.01e-18!24;UBERON:0001042!1.01e-18!24;UBERON:0008814!1.01e-18!24;UBERON:0009145!1.01e-18!24;UBERON:0000072!5.03e-16!27;UBERON:0002405!9.36e-15!70;UBERON:0005057!3.84e-14!51;UBERON:0001004!5.56e-12!42;UBERON:0000063!3.92e-11!35;UBERON:0000065!4.83e-11!41;UBERON:0003081!2.45e-09!88;UBERON:0000490!4.90e-08!66;UBERON:0002368!6.06e-08!60;UBERON:0002530!9.67e-08!65;UBERON:0003929!1.52e-07!55;UBERON:0001041!2.28e-07!92;UBERON:0003104!2.84e-07!131;UBERON:0009142!2.84e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0001134,5.72e-08,9;UBERON:0002036,5.72e-08,9;UBERON:0002385,5.72e-08,9;UBERON:0000486,5.72e-08,9;UBERON:0007503,5.72e-08,9;UBERON:0001015,5.72e-08,9;UBERON:0002329,5.72e-08,9;UBERON:0003082,5.72e-08,9;UBERON:0003059,5.72e-08,9;UBERON:0007282,5.72e-08,9;UBERON:0004290,5.72e-08,9;UBERON:0009618,5.72e-08,9;UBERON:0002370,5.76e-08,23;UBERON:0000974,5.76e-08,23;UBERON:0004807,5.76e-08,23;UBERON:0005058,5.76e-08,23;UBERON:0003351,5.76e-08,23;UBERON:0009113,5.76e-08,23;UBERON:0003295,5.76e-08,23;UBERON:0009722,5.76e-08,23;UBERON:0005562,5.76e-08,23;UBERON:0007690,5.76e-08,23;UBERON:0006562,1.24e-07,24;UBERON:0003408,1.24e-07,24;UBERON:0001557,1.24e-07,24;UBERON:0001042,1.24e-07,24;UBERON:0008814,1.24e-07,24;UBERON:0009145,1.24e-07,24;UBERON:0000383,3.18e-07,10;UBERON:0000072,8.88e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.703943610758334,0.468129052643987,0.34243593645101,0,3.76641605848653,2.62261207256992,0,0,0,0.630924330716475,0.274228867211478,0.42438965179803,0,0.695036658406197,1.30599894569468,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.09265815368454,1.5626706890476,3.66466620781659,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.17875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.8441000856536,0.202725215290164,0.102710957164827,0.129920822977795,0.537080087002444,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.0762068066549998,0.201652370273681,1.07203668813728,0.962118416403295,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.703943610758334,0.468129052643987,0.34243593645101,0,3.76641605848653,2.62261207256992,0,0,0,0.630924330716475,0.274228867211478,0.42438965179803,0,0.695036658406197,1.30599894569468,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.09265815368454,1.5626706890476,3.66466620781659,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.17875767294343,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.327726629431476,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,2.8441000856536,0.202725215290164,0.102710957164827,0.129920822977795,0.537080087002444,0.79472541912506,0.721172697119813,0.295379054349154,0.504832249740738,0.0762068066549998,0.201652370273681,1.07203668813728,0.962118416403295,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377252682772152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:31940697..31940708,+ | |short_description=p@chr7:31940697..31940708,+ | ||
}} | }} |
Latest revision as of 02:18, 5 August 2015
Short description: | p@chr7:31940697..31940708, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31940697..31940708, + |
Coexpression cluster: | MCL_coexpression_mm9:476 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.07e-11 | 11 |
pro-T cell | 4.07e-11 | 11 |
lymphoid lineage restricted progenitor cell | 3.26e-10 | 12 |
lymphocyte | 1.90e-09 | 13 |
common lymphoid progenitor | 1.90e-09 | 13 |
CD8-positive, alpha-beta T cell | 7.41e-09 | 1 |
mature alpha-beta T cell | 3.88e-08 | 9 |
alpha-beta T cell | 3.88e-08 | 9 |
immature T cell | 3.88e-08 | 9 |
mature T cell | 3.88e-08 | 9 |
immature alpha-beta T cell | 3.88e-08 | 9 |
multi-potent skeletal muscle stem cell | 5.72e-08 | 9 |
leukocyte | 2.81e-07 | 17 |
nongranular leukocyte | 2.81e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
skeletal muscle tissue | 5.72e-08 | 9 |
striated muscle tissue | 5.72e-08 | 9 |
muscle tissue | 5.72e-08 | 9 |
multilaminar epithelium | 5.72e-08 | 9 |
epithelial vesicle | 5.72e-08 | 9 |
musculature | 5.72e-08 | 9 |
somite | 5.72e-08 | 9 |
myotome | 5.72e-08 | 9 |
presomitic mesoderm | 5.72e-08 | 9 |
presumptive segmental plate | 5.72e-08 | 9 |
dermomyotome | 5.72e-08 | 9 |
trunk paraxial mesoderm | 5.72e-08 | 9 |
thymus | 5.76e-08 | 23 |
neck | 5.76e-08 | 23 |
respiratory system epithelium | 5.76e-08 | 23 |
hemolymphoid system gland | 5.76e-08 | 23 |
pharyngeal epithelium | 5.76e-08 | 23 |
thymic region | 5.76e-08 | 23 |
pharyngeal gland | 5.76e-08 | 23 |
entire pharyngeal arch endoderm | 5.76e-08 | 23 |
thymus primordium | 5.76e-08 | 23 |
early pharyngeal endoderm | 5.76e-08 | 23 |
pharynx | 1.24e-07 | 24 |
gland of gut | 1.24e-07 | 24 |
upper respiratory tract | 1.24e-07 | 24 |
chordate pharynx | 1.24e-07 | 24 |
pharyngeal arch system | 1.24e-07 | 24 |
pharyngeal region of foregut | 1.24e-07 | 24 |
musculature of body | 3.18e-07 | 10 |
segment of respiratory tract | 8.88e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.10e-22 | 3 |
muscle cancer | 1.10e-22 | 3 |
organ system cancer | 1.13e-11 | 6 |