Personal tools

FFCP PHASE1:Mm9::chr7:31836430..31836441,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=57780
|EntrezGene=57780
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P59648
|UniProt=P59648
|association_with_transcript=31bp_to_NM_022007,uc009ghr.1,uc009ghs.1_5end
|association_with_transcript=31bp_to_NM_022007,uc009ghr.1,uc009ghs.1_5end
|cluster_id=chr7:31836430..31836441,-
|description=CAGE_peak_2_at_Fxyd7_5end
|description=CAGE_peak_2_at_Fxyd7_5end
|id=chr7:31836430..31836441,-
|id=chr7:31836430..31836441,-
|ontology_enrichment_celltype=CL:0000540!6.34e-12!33;CL:0000047!6.34e-12!33;CL:0000031!6.34e-12!33;CL:0000404!6.34e-12!33;CL:0000117!1.25e-11!23;CL:0000337!1.25e-11!23;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0002319!3.20e-09!43;CL:0000393!4.17e-08!39;CL:0000211!4.17e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-12,23;CL:0000337,1.80e-12,23;CL:0000540,1.39e-09,33;CL:0000047,1.39e-09,33;CL:0000031,1.39e-09,33;CL:0000404,1.39e-09,33;CL:0000393,2.10e-07,39;CL:0000211,2.10e-07,39;CL:0002319,3.63e-07,43;CL:0000221,6.73e-07,44;CL:0000133,6.73e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0001017!9.96e-26!73;UBERON:0005743!9.96e-26!73;UBERON:0001049!1.62e-22!52;UBERON:0005068!1.62e-22!52;UBERON:0006241!1.62e-22!52;UBERON:0007135!1.62e-22!52;UBERON:0002346!6.66e-22!71;UBERON:0003075!6.66e-22!71;UBERON:0007284!6.66e-22!71;UBERON:0004121!3.71e-21!102;UBERON:0000924!3.71e-21!102;UBERON:0006601!3.71e-21!102;UBERON:0000955!2.01e-20!50;UBERON:0006238!2.01e-20!50;UBERON:0002616!7.36e-20!49;UBERON:0000033!9.55e-20!63;UBERON:0002020!3.33e-17!34;UBERON:0003080!3.50e-16!40;UBERON:0002780!1.62e-15!39;UBERON:0001890!1.62e-15!39;UBERON:0006240!1.62e-15!39;UBERON:0003056!2.28e-15!49;UBERON:0002791!1.21e-13!29;UBERON:0003528!1.21e-13!29;UBERON:0001893!1.21e-13!29;UBERON:0007811!3.94e-10!86;UBERON:0000153!1.25e-09!94;UBERON:0000956!2.22e-09!21;UBERON:0001869!2.22e-09!21;UBERON:0000203!2.22e-09!21;UBERON:0002021!3.99e-09!10;UBERON:0000411!3.99e-09!10;UBERON:0001950!3.99e-09!10;UBERON:0002619!1.15e-08!17;UBERON:0003076!4.83e-07!12;UBERON:0003057!4.83e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-35,54;UBERON:0001017,6.96e-34,73;UBERON:0001049,5.70e-33,52;UBERON:0005068,5.70e-33,52;UBERON:0006241,5.70e-33,52;UBERON:0007135,5.70e-33,52;UBERON:0001016,1.25e-32,75;UBERON:0000955,6.14e-26,47;UBERON:0006238,6.14e-26,47;UBERON:0002616,6.43e-25,46;UBERON:0002346,1.11e-24,64;UBERON:0003075,1.11e-24,64;UBERON:0007284,1.11e-24,64;UBERON:0002020,3.69e-24,34;UBERON:0004121,5.07e-23,95;UBERON:0000924,5.07e-23,95;UBERON:0006601,5.07e-23,95;UBERON:0010371,1.74e-21,73;UBERON:0003080,1.49e-20,40;UBERON:0002780,2.24e-19,39;UBERON:0001890,2.24e-19,39;UBERON:0006240,2.24e-19,39;UBERON:0003528,1.27e-17,29;UBERON:0002791,1.27e-17,29;UBERON:0001893,1.27e-17,29;UBERON:0002021,1.01e-16,10;UBERON:0000411,1.01e-16,10;UBERON:0001950,1.01e-16,10;UBERON:0010314,9.08e-16,92;UBERON:0003056,2.59e-15,49;UBERON:0003076,2.43e-13,12;UBERON:0003057,2.43e-13,12;UBERON:0002619,1.77e-12,17;UBERON:0000956,3.05e-11,21;UBERON:0001869,3.05e-11,21;UBERON:0000203,3.05e-11,21;UBERON:0000025,7.48e-10,114;UBERON:0002240,8.20e-10,6;UBERON:0005174,8.20e-10,6;UBERON:0001137,8.20e-10,6;UBERON:0004111,3.57e-09,122;UBERON:0001948,1.82e-08,5;UBERON:0002315,1.82e-08,5;UBERON:0002420,7.59e-08,8;UBERON:0007245,7.59e-08,8;UBERON:0010009,7.59e-08,8;UBERON:0010011,7.59e-08,8;UBERON:0000454,7.59e-08,8
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.675029691658453,0.420649922702764,19.1386159550548,24.0746709637259,0.734944795289724,0.670918297127655,0.919218786610021,1.10115880999389,3.44755812830007,3.99376986466233,1.58263545276233,0.914876436024097,1.56274011167028,4.18774498502071,3.37657566019008,1.98637722109853,15.3206864446307,12.9558229527184,4.10078780815661,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,5.09288173976397,4.57500602818627,1.7591609295801,17.7300806596122,18.4115129277838,3.32460871295296,4.86723789203273,1.01839363850316,0,0,0,0.130120442962704,0,0.180062129805349,0.90422890701429,0.340182495756639,0.896796041993948,0.655912071918102,0.517406741478031,0,0,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,8.83217783969334,2.36680608472354,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0.80673409849337,0.667134131534611,0.570676878337677,0,0.988193728344065,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,7.54587772942622,7.03270119553219,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,1.75353514746787,0.395287777946524,1.60660658210904,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,1.60531935841864,4.11372551505302,4.56697423671899,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,10.7546675166096,0,0,0,0,0,0,0,0.139951452323658,0,0,1.10717597753397,0.813277868507395,0.540026704109006,0,0.436725127492355,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0.774958940866387,1.85851738039856,0.821500670520278,1.0416350787516,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,44.0506437241312,44.6515479411962,40.6755814541972,32.1365450982696,20.5524755931193,18.1294535373528,31.7260575108949,18.0128481289688,28.0948293570207,23.8169743405837,0,0.399024873401031,0.853668028770671,0.972426868273176,0.838452650511929,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,1.32038438970253,1.21733959710847,0.640251524048693,0.804096565378586,0.476293691283074,0.579421629724277,1.15745532278223,0.824171801606613,0.294397840268795,1.71434626192708,0.532427418478012,1.1921809497366,0.726732083161643,1.2234219453993,0.592302255241736,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.711810108745045,0.886540341380071,2.04615521584845,1.23949472948773,0.771626443924566,1.99848462350357,0.935726433781634,2.36358159453128,0.956441660344217,1.10295709559758,0.695603506861264
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.675029691658453,0.420649922702764,19.1386159550548,24.0746709637259,0.734944795289724,0.670918297127655,0.919218786610021,1.10115880999389,3.44755812830007,3.99376986466233,1.58263545276233,0.914876436024097,1.56274011167028,4.18774498502071,3.37657566019008,1.98637722109853,15.3206864446307,12.9558229527184,4.10078780815661,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.346970653532272,1.52232739156071,0.461230994512117,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,5.09288173976397,4.57500602818627,1.7591609295801,17.7300806596122,18.4115129277838,3.32460871295296,4.86723789203273,1.01839363850316,0,0,0,0.130120442962704,0,0.180062129805349,0.90422890701429,0.340182495756639,0.896796041993948,0.655912071918102,0.517406741478031,0,0,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,8.83217783969334,2.36680608472354,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0.80673409849337,0.667134131534611,0.570676878337677,0,0.988193728344065,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,7.54587772942622,7.03270119553219,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0,1.75353514746787,0.395287777946524,1.60660658210904,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,1.60531935841864,4.11372551505302,4.56697423671899,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,10.7546675166096,0,0,0,0,0,0,0,0.139951452323658,0,0,1.10717597753397,0.813277868507395,0.540026704109006,0,0.436725127492355,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0.774958940866387,1.85851738039856,0.821500670520278,1.0416350787516,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,44.0506437241312,44.6515479411962,40.6755814541972,32.1365450982696,20.5524755931193,18.1294535373528,31.7260575108949,18.0128481289688,28.0948293570207,23.8169743405837,0,0.399024873401031,0.853668028770671,0.972426868273176,0.838452650511929,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,1.32038438970253,1.21733959710847,0.640251524048693,0.804096565378586,0.476293691283074,0.579421629724277,1.15745532278223,0.824171801606613,0.294397840268795,1.71434626192708,0.532427418478012,1.1921809497366,0.726732083161643,1.2234219453993,0.592302255241736,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.711810108745045,0.886540341380071,2.04615521584845,1.23949472948773,0.771626443924566,1.99848462350357,0.935726433781634,2.36358159453128,0.956441660344217,1.10295709559758,0.695603506861264
|short_description=p2@Fxyd7
|short_description=p2@Fxyd7
}}
}}

Latest revision as of 15:35, 26 September 2015

Short description:p2@Fxyd7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fxyd7_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 31bp_to_NM_022007, uc009ghr.1, uc009ghs.1_5end
EntrezGene:Fxyd7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fxyd7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.80e-1223
neuroblast (sensu Vertebrata)1.80e-1223
neuron1.39e-0933
neuronal stem cell1.39e-0933
neuroblast1.39e-0933
electrically signaling cell1.39e-0933
electrically responsive cell2.10e-0739
electrically active cell2.10e-0739
neural cell3.63e-0743
ectodermal cell6.73e-0744
neurectodermal cell6.73e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.27e-3554
central nervous system6.96e-3473
neural tube5.70e-3352
neural rod5.70e-3352
future spinal cord5.70e-3352
neural keel5.70e-3352
nervous system1.25e-3275
brain6.14e-2647
future brain6.14e-2647
regional part of brain6.43e-2546
neurectoderm1.11e-2464
neural plate1.11e-2464
presumptive neural plate1.11e-2464
gray matter3.69e-2434
ectoderm-derived structure5.07e-2395
ectoderm5.07e-2395
presumptive ectoderm5.07e-2395
ecto-epithelium1.74e-2173
anterior neural tube1.49e-2040
regional part of forebrain2.24e-1939
forebrain2.24e-1939
future forebrain2.24e-1939
brain grey matter1.27e-1729
regional part of telencephalon1.27e-1729
telencephalon1.27e-1729
occipital lobe1.01e-1610
visual cortex1.01e-1610
neocortex1.01e-1610
structure with developmental contribution from neural crest9.08e-1692
pre-chordal neural plate2.59e-1549
posterior neural tube2.43e-1312
chordal neural plate2.43e-1312
regional part of cerebral cortex1.77e-1217
cerebral cortex3.05e-1121
cerebral hemisphere3.05e-1121
pallium3.05e-1121
tube7.48e-10114
spinal cord8.20e-106
dorsal region element8.20e-106
dorsum8.20e-106
anatomical conduit3.57e-09122
regional part of spinal cord1.82e-085
gray matter of spinal cord1.82e-085
basal ganglion7.59e-088
nuclear complex of neuraxis7.59e-088
aggregate regional part of brain7.59e-088
collection of basal ganglia7.59e-088
cerebral subcortex7.59e-088
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:31836430..31836441,-&oldid=4261005"