FFCP PHASE1:Mm9::chr7:17613202..17613270,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19060 | |EntrezGene=19060 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |||
|TSSclassifier=NA | |||
|UniProt=G5E819,Q60676 | |UniProt=G5E819,Q60676 | ||
|association_with_transcript=0bp_to_ENSMUST00000003183,ENSMUST00000156366,NM_011155,uc009fiq.2_5end | |association_with_transcript=0bp_to_ENSMUST00000003183,ENSMUST00000156366,NM_011155,uc009fiq.2_5end | ||
|cluster_id=chr7:17613202..17613270,- | |||
|description=CAGE_peak_2_at_Ppp5c_5end | |description=CAGE_peak_2_at_Ppp5c_5end | ||
|id=chr7:17613202..17613270,- | |id=chr7:17613202..17613270,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.04e-09!99;UBERON:0003929!2.14e-08!55;UBERON:0001007!3.56e-08!128;UBERON:0001555!3.56e-08!128;UBERON:0007026!3.56e-08!128;UBERON:0004119!8.95e-08!130;UBERON:0000925!8.95e-08!130;UBERON:0006595!8.95e-08!130;UBERON:0004921!1.08e-07!126;UBERON:0004185!1.08e-07!126;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0000344!3.50e-07!15;UBERON:0007023!5.27e-07!51;UBERON:0002405!7.00e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,2.14e-08,55;UBERON:0001007,8.58e-08,116;UBERON:0001555,8.58e-08,116;UBERON:0007026,8.58e-08,116;UBERON:0004119,2.19e-07,118;UBERON:0000925,2.19e-07,118;UBERON:0006595,2.19e-07,118;UBERON:0004921,2.54e-07,114;UBERON:0002021,2.75e-07,10;UBERON:0000411,2.75e-07,10;UBERON:0001950,2.75e-07,10;UBERON:0011216,3.22e-07,194;UBERON:0000344,3.50e-07,15;UBERON:0000160,5.27e-07,31;UBERON:0007023,5.27e-07,51 | |||
|phase1_expression=5.2849119544582,65.6073766361999,51.4149140510176,118.263506620971,118.712287997284,54.3928840994523,53.2636820557799,32.4099541838356,27.453800819575,20.8317428426574,44.1742358021803,31.1909141671765,43.9985875923199,39.0769198812918,43.3042690360362,32.1935675149823,25.1842276126133,35.6472246854809,31.8105485965314,40.3170169208129,27.2138528483423,12.0142050953071,9.14199261986274,49.1176737975758,37.3937128139487,45.3643251650866,57.2913454891569,49.1274410523827,55.8668853201739,44.1052727079879,34.1464986409169,28.5763803056834,28.2929802288902,31.6963362030877,47.371665639209,40.5612534674721,38.3838389773254,18.8339233831608,20.3147189576188,19.3703785270305,12.3528612486513,17.7591826089196,14.0798002379035,18.6327290603854,19.0588630692687,14.5001934207728,22.6893489860931,19.4042389178597,24.8245386489953,21.1928589990969,25.1975558925653,11.5002051491977,36.2410429084711,51.5007120828054,44.0282876876628,18.7799388306241,18.0516067161417,24.2365883370398,14.7691016427506,17.4567023159771,14.5781222806421,39.9836547841576,46.2433293977792,61.6431306337758,67.2429126545543,63.2327302302029,35.0532129306534,19.5951335713993,14.101787273953,16.2007125998029,18.5085965989216,25.4229376119385,23.412065340871,14.8213867050094,11.3097655801519,19.3035945188104,71.5753226496027,64.8651677472754,68.2013007657721,12.0016521834476,11.5274430939036,7.29278718779464,91.0136576744502,41.0816705323126,45.3810795897126,17.9723437138937,18.5083185038834,14.7255562201987,28.5487748866104,23.2760405128899,33.0445517119913,44.7420416030321,29.918738683141,66.3834925714515,64.9776417447669,72.5803557097684,48.1724361051909,12.1005529030421,15.846946280775,16.606960001986,4.08445917352373,11.5493829672886,48.4129955442627,85.3280043783997,23.8140145112336,23.3091076237091,19.7154533555765,38.5941513450423,28.4831672011889,19.0005938002976,12.4909435271618,8.22056791442781,13.8369298353635,15.2229866958149,11.2885158850277,29.4059823711441,13.5957232253906,36.005239873058,31.8459798701955,25.5591622916907,32.2428616952175,37.8202697445473,54.0536107532554,80.2219383811639,69.5363066620671,50.0695828208839,11.981512450592,13.7977628128484,9.02198612218759,48.8317484459722,42.0900554593136,25.00521607046,54.9284851807594,58.814555185976,52.1547991844496,54.3508231276988,8.04530974417499,18.5366386209039,15.1633655060205,37.8795340595653,6.50602214813519,7.58676944630461,7.38254732201932,9.64510834148576,6.19132142277083,8.32739181851524,10.7756983243688,27.9399640398137,5.38919982332106,8.69887968771969,9.85326295318113,15.1245055375027,8.89751197521913,19.5021213252413,18.108828003899,8.16040493955822,14.7464769335779,10.5512641917033,13.924011470384,7.66365358381357,11.9608290590359,12.604344302271,15.3884078130387,16.9217239302767,13.4212388212019,13.9520366850245,19.8522317035718,15.0627291653649,22.7092592880603,27.4159665012089,35.1838633429014,39.6201965922651,46.5446244417027,48.4485171724942,47.3152384269286,16.5676425930648,74.3442261713545,61.8814325992694,4.05247676016945,8.82499353069666,13.2733485161756,20.5717195115809,26.9077433052293,29.4849720474467,56.9434873853414,23.3872515708095,28.1495433856302,29.4455578620903,36.2633202041563,49.4350674759822,57.0604451669193,55.3612739647141,8.34538764193559,7.99739588268102,6.76246414038483,6.10953983535943,11.6371492300575,7.85521182771568,15.3032419840703,25.5365556004712,31.8707417517991,35.6617803734004,45.6537045714209,21.8567088488083,19.0662225259807,24.5099702499491,26.9803961446709,29.6647906495473,25.7172110299234,22.727994858614,10.5387897403773,30.201755450689,30.1913233707445,27.1662891798007,35.5722947350599,48.4951445658455,44.1317637263904,50.6565697431536,26.9739657643243,7.01118223550794,8.8001087278694,9.50572480341054,13.6120344007331,13.4005005953453,15.7108802984769,19.3182311379221,15.9211495547253,14.1737401375216,17.8589340896386,28.5122167605384,27.8022820804092,27.3386720719057,42.2215595029962,56.0222854333271,49.1764273019036,30.3530420935206,58.9220665255196,61.7705588340911,8.85248705034047,54.2812493489402,6.94118082715765,5.85658116444958,7.32439552291516,11.4705023017225,10.4715376818725,7.64306633129848,11.334699646897,8.18316402151673,7.90575555893047,40.8078071855695,13.7681882652021,12.8207234640424,6.02681749608232,16.8269525431986,54.4255067193848,9.95400608235424,13.9068836203785,21.8781892516842,30.1207930738388,25.2096821314021,15.5056975900933,19.2672876623078,25.6678112436999,43.6130725951426,56.9260486304993,56.7245487865028,21.7881347682424,7.74262704334634,8.27895576209629,8.57348140126369,10.6404140185364,9.81028496811388,11.5184314421485,6.69822888052118,11.2642419870581,21.6068712281097,23.155481795771,32.4825918294716,14.8547272560233,21.2301495747109,19.3383197285081,18.2196398717018,58.0046864893403,59.8923725493946,24.6054068348908,16.0981757011314,19.6306199011894,21.0972671845254,22.6912418016902,30.8850533828806,13.2583175395207,15.6745626602497,11.746997773376,55.3708958448766,5.3777118908793,11.5892096262304,15.6607744191612,16.517975385143,22.7097066296025,24.6801753884222,26.6970661992835,54.1834799906941,44.7171657856685,34.7950015328678,5.6369293868419,8.22341003241883,8.60384150376908,8.75030347548214,7.8787492321416,7.09615727061268,5.51579021635044,8.98410255423256,7.65473214307689,7.73069186643219,12.6733202753461,33.4971787865869,13.9880398550213,20.234058561471,27.5432144712925,28.4652446111295,27.020664250252,31.010425976152,30.2763530707883,34.9343916820591,34.1406493814399,40.1288216844625,37.7161998462842,36.4642879816849,35.0630706544707,28.3412979519014,38.4035699337132,28.4392925452038,40.9638463928351,23.375940877895,22.3342145786907,21.0624367907355,31.9408884827808,22.5707446815914,53.0866732060043,58.0009797999043,63.0185064783336,57.0552565381043,74.673994655,83.8487226102568,64.8021600222534,90.5145618480683,82.4719184351252,92.1613354918239,5.29315472679301,7.18244772121856,11.7806187970353,20.664070950805,17.8171188233785,22.6127515393517,20.8911924133518,23.4879965252339,25.0316983481616,21.9846574234504,21.0387818908899,20.7488975524684,23.7849428973501,21.1283002936069,20.7342042929764,25.2435656380029,25.6104360338131,27.3931093058461,16.8955219329356,22.3742358604284,28.8010172003749,24.6691370561479,24.3204913746267,22.3833481613786,24.5625482884013,23.4382463859944,25.7928441750609,22.0978557607788,22.9508952399506,31.9851094844911,27.8792292591809,26.9902281709044,27.4184798923692,26.1843261604283,19.097754487133,15.4882558321526,23.3931608445408,14.6112316752843,18.363679878609,22.2797333310711,28.2878759456914 | |phase1_expression=5.2849119544582,65.6073766361999,51.4149140510176,118.263506620971,118.712287997284,54.3928840994523,53.2636820557799,32.4099541838356,27.453800819575,20.8317428426574,44.1742358021803,31.1909141671765,43.9985875923199,39.0769198812918,43.3042690360362,32.1935675149823,25.1842276126133,35.6472246854809,31.8105485965314,40.3170169208129,27.2138528483423,12.0142050953071,9.14199261986274,49.1176737975758,37.3937128139487,45.3643251650866,57.2913454891569,49.1274410523827,55.8668853201739,44.1052727079879,34.1464986409169,28.5763803056834,28.2929802288902,31.6963362030877,47.371665639209,40.5612534674721,38.3838389773254,18.8339233831608,20.3147189576188,19.3703785270305,12.3528612486513,17.7591826089196,14.0798002379035,18.6327290603854,19.0588630692687,14.5001934207728,22.6893489860931,19.4042389178597,24.8245386489953,21.1928589990969,25.1975558925653,11.5002051491977,36.2410429084711,51.5007120828054,44.0282876876628,18.7799388306241,18.0516067161417,24.2365883370398,14.7691016427506,17.4567023159771,14.5781222806421,39.9836547841576,46.2433293977792,61.6431306337758,67.2429126545543,63.2327302302029,35.0532129306534,19.5951335713993,14.101787273953,16.2007125998029,18.5085965989216,25.4229376119385,23.412065340871,14.8213867050094,11.3097655801519,19.3035945188104,71.5753226496027,64.8651677472754,68.2013007657721,12.0016521834476,11.5274430939036,7.29278718779464,91.0136576744502,41.0816705323126,45.3810795897126,17.9723437138937,18.5083185038834,14.7255562201987,28.5487748866104,23.2760405128899,33.0445517119913,44.7420416030321,29.918738683141,66.3834925714515,64.9776417447669,72.5803557097684,48.1724361051909,12.1005529030421,15.846946280775,16.606960001986,4.08445917352373,11.5493829672886,48.4129955442627,85.3280043783997,23.8140145112336,23.3091076237091,19.7154533555765,38.5941513450423,28.4831672011889,19.0005938002976,12.4909435271618,8.22056791442781,13.8369298353635,15.2229866958149,11.2885158850277,29.4059823711441,13.5957232253906,36.005239873058,31.8459798701955,25.5591622916907,32.2428616952175,37.8202697445473,54.0536107532554,80.2219383811639,69.5363066620671,50.0695828208839,11.981512450592,13.7977628128484,9.02198612218759,48.8317484459722,42.0900554593136,25.00521607046,54.9284851807594,58.814555185976,52.1547991844496,54.3508231276988,8.04530974417499,18.5366386209039,15.1633655060205,37.8795340595653,6.50602214813519,7.58676944630461,7.38254732201932,9.64510834148576,6.19132142277083,8.32739181851524,10.7756983243688,27.9399640398137,5.38919982332106,8.69887968771969,9.85326295318113,15.1245055375027,8.89751197521913,19.5021213252413,18.108828003899,8.16040493955822,14.7464769335779,10.5512641917033,13.924011470384,7.66365358381357,11.9608290590359,12.604344302271,15.3884078130387,16.9217239302767,13.4212388212019,13.9520366850245,19.8522317035718,15.0627291653649,22.7092592880603,27.4159665012089,35.1838633429014,39.6201965922651,46.5446244417027,48.4485171724942,47.3152384269286,16.5676425930648,74.3442261713545,61.8814325992694,4.05247676016945,8.82499353069666,13.2733485161756,20.5717195115809,26.9077433052293,29.4849720474467,56.9434873853414,23.3872515708095,28.1495433856302,29.4455578620903,36.2633202041563,49.4350674759822,57.0604451669193,55.3612739647141,8.34538764193559,7.99739588268102,6.76246414038483,6.10953983535943,11.6371492300575,7.85521182771568,15.3032419840703,25.5365556004712,31.8707417517991,35.6617803734004,45.6537045714209,21.8567088488083,19.0662225259807,24.5099702499491,26.9803961446709,29.6647906495473,25.7172110299234,22.727994858614,10.5387897403773,30.201755450689,30.1913233707445,27.1662891798007,35.5722947350599,48.4951445658455,44.1317637263904,50.6565697431536,26.9739657643243,7.01118223550794,8.8001087278694,9.50572480341054,13.6120344007331,13.4005005953453,15.7108802984769,19.3182311379221,15.9211495547253,14.1737401375216,17.8589340896386,28.5122167605384,27.8022820804092,27.3386720719057,42.2215595029962,56.0222854333271,49.1764273019036,30.3530420935206,58.9220665255196,61.7705588340911,8.85248705034047,54.2812493489402,6.94118082715765,5.85658116444958,7.32439552291516,11.4705023017225,10.4715376818725,7.64306633129848,11.334699646897,8.18316402151673,7.90575555893047,40.8078071855695,13.7681882652021,12.8207234640424,6.02681749608232,16.8269525431986,54.4255067193848,9.95400608235424,13.9068836203785,21.8781892516842,30.1207930738388,25.2096821314021,15.5056975900933,19.2672876623078,25.6678112436999,43.6130725951426,56.9260486304993,56.7245487865028,21.7881347682424,7.74262704334634,8.27895576209629,8.57348140126369,10.6404140185364,9.81028496811388,11.5184314421485,6.69822888052118,11.2642419870581,21.6068712281097,23.155481795771,32.4825918294716,14.8547272560233,21.2301495747109,19.3383197285081,18.2196398717018,58.0046864893403,59.8923725493946,24.6054068348908,16.0981757011314,19.6306199011894,21.0972671845254,22.6912418016902,30.8850533828806,13.2583175395207,15.6745626602497,11.746997773376,55.3708958448766,5.3777118908793,11.5892096262304,15.6607744191612,16.517975385143,22.7097066296025,24.6801753884222,26.6970661992835,54.1834799906941,44.7171657856685,34.7950015328678,5.6369293868419,8.22341003241883,8.60384150376908,8.75030347548214,7.8787492321416,7.09615727061268,5.51579021635044,8.98410255423256,7.65473214307689,7.73069186643219,12.6733202753461,33.4971787865869,13.9880398550213,20.234058561471,27.5432144712925,28.4652446111295,27.020664250252,31.010425976152,30.2763530707883,34.9343916820591,34.1406493814399,40.1288216844625,37.7161998462842,36.4642879816849,35.0630706544707,28.3412979519014,38.4035699337132,28.4392925452038,40.9638463928351,23.375940877895,22.3342145786907,21.0624367907355,31.9408884827808,22.5707446815914,53.0866732060043,58.0009797999043,63.0185064783336,57.0552565381043,74.673994655,83.8487226102568,64.8021600222534,90.5145618480683,82.4719184351252,92.1613354918239,5.29315472679301,7.18244772121856,11.7806187970353,20.664070950805,17.8171188233785,22.6127515393517,20.8911924133518,23.4879965252339,25.0316983481616,21.9846574234504,21.0387818908899,20.7488975524684,23.7849428973501,21.1283002936069,20.7342042929764,25.2435656380029,25.6104360338131,27.3931093058461,16.8955219329356,22.3742358604284,28.8010172003749,24.6691370561479,24.3204913746267,22.3833481613786,24.5625482884013,23.4382463859944,25.7928441750609,22.0978557607788,22.9508952399506,31.9851094844911,27.8792292591809,26.9902281709044,27.4184798923692,26.1843261604283,19.097754487133,15.4882558321526,23.3931608445408,14.6112316752843,18.363679878609,22.2797333310711,28.2878759456914 | ||
|short_description=p2@Ppp5c | |short_description=p2@Ppp5c | ||
}} | }} |
Latest revision as of 07:28, 26 September 2015
Short description: | p2@Ppp5c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp5c_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000003183, ENSMUST00000156366, NM_011155, uc009fiq.2_5end |
EntrezGene: | Ppp5c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut epithelium | 2.14e-08 | 55 |
digestive system | 8.58e-08 | 116 |
digestive tract | 8.58e-08 | 116 |
primitive gut | 8.58e-08 | 116 |
endoderm-derived structure | 2.19e-07 | 118 |
endoderm | 2.19e-07 | 118 |
presumptive endoderm | 2.19e-07 | 118 |
subdivision of digestive tract | 2.54e-07 | 114 |
occipital lobe | 2.75e-07 | 10 |
visual cortex | 2.75e-07 | 10 |
neocortex | 2.75e-07 | 10 |
organ system subdivision | 3.22e-07 | 194 |
mucosa | 3.50e-07 | 15 |
intestine | 5.27e-07 | 31 |
adult organism | 5.27e-07 | 51 |