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FFCP PHASE1:Mm9::chr4:130348395..130348423,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20970
|EntrezGene=20970
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q64519,B1ASF5
|UniProt=Q64519,B1ASF5
|association_with_transcript=-28bp_to_ENSMUST00000070478,NM_011520,uc008uzr.1_5end
|association_with_transcript=-28bp_to_ENSMUST00000070478,NM_011520,uc008uzr.1_5end
|cluster_id=chr4:130348395..130348423,+
|description=CAGE_peak_2_at_Sdc3_5end
|description=CAGE_peak_2_at_Sdc3_5end
|id=chr4:130348395..130348423,+
|id=chr4:130348395..130348423,+
|ontology_enrichment_celltype=CL:0000221!1.39e-15!44;CL:0000133!1.39e-15!44;CL:0002319!1.69e-15!43;CL:0000117!4.14e-15!23;CL:0000337!4.14e-15!23;CL:0000055!1.18e-14!50;CL:0000540!4.44e-13!33;CL:0000047!4.44e-13!33;CL:0000031!4.44e-13!33;CL:0000404!4.44e-13!33;CL:0000393!5.31e-12!39;CL:0000211!5.31e-12!39
|ontology_enrichment_celltype=CL:0000221!1.39e-15!44;CL:0000133!1.39e-15!44;CL:0002319!1.69e-15!43;CL:0000117!4.14e-15!23;CL:0000337!4.14e-15!23;CL:0000055!1.18e-14!50;CL:0000540!4.44e-13!33;CL:0000047!4.44e-13!33;CL:0000031!4.44e-13!33;CL:0000404!4.44e-13!33;CL:0000393!5.31e-12!39;CL:0000211!5.31e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-23,23;CL:0000337,3.10e-23,23;CL:0002319,1.71e-15,43;CL:0000221,6.74e-15,44;CL:0000133,6.74e-15,44;CL:0000540,9.17e-15,33;CL:0000047,9.17e-15,33;CL:0000031,9.17e-15,33;CL:0000404,9.17e-15,33;CL:0000393,6.06e-13,39;CL:0000211,6.06e-13,39;CL:0002321,1.41e-07,70;CL:0002609,6.08e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.04e-24!75;UBERON:0001016!8.04e-24!75;UBERON:0001017!1.01e-22!73;UBERON:0005743!1.01e-22!73;UBERON:0004121!1.47e-21!102;UBERON:0000924!1.47e-21!102;UBERON:0006601!1.47e-21!102;UBERON:0002020!3.88e-18!34;UBERON:0002346!4.15e-18!71;UBERON:0003075!4.15e-18!71;UBERON:0007284!4.15e-18!71;UBERON:0001049!1.51e-17!52;UBERON:0005068!1.51e-17!52;UBERON:0006241!1.51e-17!52;UBERON:0007135!1.51e-17!52;UBERON:0000955!2.73e-15!50;UBERON:0006238!2.73e-15!50;UBERON:0002616!5.18e-15!49;UBERON:0002791!1.55e-14!29;UBERON:0003528!1.55e-14!29;UBERON:0001893!1.55e-14!29;UBERON:0000033!2.45e-13!63;UBERON:0003080!2.41e-12!40;UBERON:0002780!7.25e-12!39;UBERON:0001890!7.25e-12!39;UBERON:0006240!7.25e-12!39;UBERON:0003056!6.26e-11!49;UBERON:0000956!7.61e-10!21;UBERON:0001869!7.61e-10!21;UBERON:0000203!7.61e-10!21;UBERON:0002619!1.07e-07!17;UBERON:0000468!1.15e-07!333;UBERON:0000153!8.31e-07!94;UBERON:0000025!9.62e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.74e-27,75;UBERON:0001017,1.06e-25,73;UBERON:0002020,2.54e-25,34;UBERON:0000073,2.03e-24,54;UBERON:0001049,4.72e-23,52;UBERON:0005068,4.72e-23,52;UBERON:0006241,4.72e-23,52;UBERON:0007135,4.72e-23,52;UBERON:0004121,1.89e-20,95;UBERON:0000924,1.89e-20,95;UBERON:0006601,1.89e-20,95;UBERON:0003528,1.07e-19,29;UBERON:0002791,1.07e-19,29;UBERON:0001893,1.07e-19,29;UBERON:0002346,3.82e-19,64;UBERON:0003075,3.82e-19,64;UBERON:0007284,3.82e-19,64;UBERON:0000955,1.30e-17,47;UBERON:0006238,1.30e-17,47;UBERON:0010314,3.10e-17,92;UBERON:0002616,3.47e-17,46;UBERON:0003080,1.73e-16,40;UBERON:0002780,9.46e-16,39;UBERON:0001890,9.46e-16,39;UBERON:0006240,9.46e-16,39;UBERON:0010371,5.45e-15,73;UBERON:0003056,1.83e-14,49;UBERON:0000956,2.10e-12,21;UBERON:0001869,2.10e-12,21;UBERON:0000203,2.10e-12,21;UBERON:0002619,4.07e-09,17;UBERON:0002420,9.01e-09,8;UBERON:0007245,9.01e-09,8;UBERON:0010009,9.01e-09,8;UBERON:0010011,9.01e-09,8;UBERON:0000454,9.01e-09,8;UBERON:0002240,8.26e-08,6;UBERON:0005174,8.26e-08,6;UBERON:0001137,8.26e-08,6;UBERON:0003076,2.96e-07,12;UBERON:0003057,2.96e-07,12;UBERON:0001948,4.75e-07,5;UBERON:0002315,4.75e-07,5;UBERON:0002021,7.20e-07,10;UBERON:0000411,7.20e-07,10;UBERON:0001950,7.20e-07,10
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|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0,0.159544317990673,0,0,0.999329285446988,0.202475267389826,0,0.157731082679119,0,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0.388859798148567,0.699932108126813,2.87505128729943,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,10.1158230429799,11.6378015439847,10.775133859605,1.0165335962074,0,3.1496490104849,0.988866362566974,5.6838409195688,8.08920298399693,11.5265491596466,4.56234294157302,4.86021377994086,3.78584930432488,16.2821061110168,14.3564551618549,3.1847607795888,4.2172007248024,8.27296907949019,1.10115880999389,4.59674417106676,3.5329502648936,13.0567424852892,19.3038928001084,11.4600941522487,5.02529398202486,1.68828783009504,2.13917546887534,18.8562294703147,15.5185132071022,10.9975673036927,2.72614295999463,2.04043212288321,0,0.860423876981386,0,0,0,0,0.702222100658759,0.340860645156116,0.259786004602869,0,0.845060518660083,5.13305909657271,0,0,0,0,0,0,0.776813650941515,1.63286352971307,1.38788261412909,1.21786191324856,1.38369298353635,1.80867168663147,1.64624189989987,2.63899841792318,0,0,0,0.323533699894818,0.441683036920787,0,0,1.17112318804619,1.04723353406728,0.255457055208591,0.11981512450592,0,0,2.54644086988199,3.66000482254901,7.91622418311046,2.25971616249959,1.27857728665165,2.28566849015516,1.94689515681309,1.32391173005411,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0.900310649026746,1.20563854268572,1.7009124787832,0.768682321709099,1.59292931751539,0,1.5089759505299,1.70195472151037,1.05570674498369,0.876782929710299,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,1.65700618028402,0.469052119962192,1.08037236876609,0.946978942340841,0.787056926989615,0.308534225774757,0.232533944750408,0,0.116765342367169,0.658239399653922,0.164167464079095,0,0.438599962275997,0.219550115291051,0,1.47202963994889,8.64398743985989,0,0,0.853153002140936,0.928946687441754,0.644337306610467,0.605050573870028,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0,0.757965647081939,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0.172684981865896,0,1.50791283939272,2.71952841909355,0,0.275936746304732,1.60550589987792,2.22702204525186,0.163934945376675,0,0,0.780877488593277,0.861693590931196,1.67278158566786,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,1.28528526568723,0.141940085208269,0.534196811001766,0.81443479676788,0.164970122972535,0,0.971122544619926,0.604647113929502,0,0.295301892880773,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,1.16422815404479,0,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0,0,0.49465875882444,0.322928853391811,0.482503399425247,0.119372344003136,0,0,2.78137953015765,0.683483523191411,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0,0.632671987162271,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.743881101528023,0,0,0,0,0.897099276263873,0.992750942742586,0.583353565032143,0.516639293910924,0.337912250981556,1.40828686374905,0.39061315453185,0,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.288635524920988,0.116876902181569,0.453460767230423,0.221985953374065,0,0.167884616364078,0.965947970160952,0.750729901804728,0.36630324853453,0,0.501572104035363,3.3885110557024,3.22227665555024,4.01026859407578,2.57779773515531,1.37016503954128,2.2661816921691,4.72515750162264,0.900642406448441,1.81256963593682,1.55328093525546,0.518936737920883,0.798049746802062,2.04880326904961,1.70174701947806,0.838452650511929,1.2869045591501,0.666740183404846,0.824140228955577,0.962757628775446,2.02157769411038,1.01391719956096,1.50901073108861,1.49826411951812,1.72867911493147,2.12511235135769,0.952587382566147,1.39061191133827,0.964546102318525,1.64834360321323,1.32479028120958,0.342869252385415,0.887379030796687,0.715308569841963,1.59881058295561,1.12931256498397,1.18460451048347,1.46342378298218,0.789209134313529,0.950628796921032,0,2.25406534435931,1.97008964751127,0.409231043169689,1.39443157067369,0.578719832943424,3.99696924700713,1.16965804222704,1.28922632428979,0.956441660344217,0.661774257358546,0.231867835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|short_description=p2@Sdc3
|short_description=p2@Sdc3
}}
}}

Latest revision as of 10:07, 26 September 2015

Short description:p2@Sdc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sdc3_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -28bp_to_ENSMUST00000070478, NM_011520, uc008uzr.1_5end
EntrezGene:Sdc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sdc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.00
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G18.64
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.74e-2775
central nervous system1.06e-2573
gray matter2.54e-2534
regional part of nervous system2.03e-2454
neural tube4.72e-2352
neural rod4.72e-2352
future spinal cord4.72e-2352
neural keel4.72e-2352
ectoderm-derived structure1.89e-2095
ectoderm1.89e-2095
presumptive ectoderm1.89e-2095
brain grey matter1.07e-1929
regional part of telencephalon1.07e-1929
telencephalon1.07e-1929
neurectoderm3.82e-1964
neural plate3.82e-1964
presumptive neural plate3.82e-1964
brain1.30e-1747
future brain1.30e-1747
structure with developmental contribution from neural crest3.10e-1792
regional part of brain3.47e-1746
anterior neural tube1.73e-1640
regional part of forebrain9.46e-1639
forebrain9.46e-1639
future forebrain9.46e-1639
ecto-epithelium5.45e-1573
pre-chordal neural plate1.83e-1449
cerebral cortex2.10e-1221
cerebral hemisphere2.10e-1221
pallium2.10e-1221
regional part of cerebral cortex4.07e-0917
basal ganglion9.01e-098
nuclear complex of neuraxis9.01e-098
aggregate regional part of brain9.01e-098
collection of basal ganglia9.01e-098
cerebral subcortex9.01e-098
spinal cord8.26e-086
dorsal region element8.26e-086
dorsum8.26e-086
posterior neural tube2.96e-0712
chordal neural plate2.96e-0712
regional part of spinal cord4.75e-075
gray matter of spinal cord4.75e-075
occipital lobe7.20e-0710
visual cortex7.20e-0710
neocortex7.20e-0710
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