FFCP PHASE1:Mm9::chr13:52692323..52692334,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20963 | |EntrezGene=20963 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=512 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000140339_5end | |association_with_transcript=0bp_to_ENSMUST00000140339_5end | ||
|cluster_id=chr13:52692323..52692334,+ | |||
|description=CAGE_peak_11_at_Syk_5end | |description=CAGE_peak_11_at_Syk_5end | ||
|id=chr13:52692323..52692334,+ | |id=chr13:52692323..52692334,+ | ||
|ontology_enrichment_celltype=CL:0000049!4.12e-12!19;CL:0000763!2.44e-09!16;CL:0000988!6.46e-08!32;CL:0002032!6.46e-08!32;CL:0000037!6.46e-08!32;CL:0000566!6.46e-08!32;CL:0000837!6.46e-08!32;CL:0000557!1.38e-07!7;CL:0000839!6.59e-07!13 | |ontology_enrichment_celltype=CL:0000049!4.12e-12!19;CL:0000763!2.44e-09!16;CL:0000988!6.46e-08!32;CL:0002032!6.46e-08!32;CL:0000037!6.46e-08!32;CL:0000566!6.46e-08!32;CL:0000837!6.46e-08!32;CL:0000557!1.38e-07!7;CL:0000839!6.59e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.99e-26,19;CL:0000988,1.30e-23,32;CL:0002032,1.30e-23,32;CL:0000037,1.30e-23,32;CL:0000837,1.30e-23,32;CL:0002320,2.21e-20,46;CL:0000134,2.21e-20,46;CL:0000763,1.63e-17,16;CL:0000219,6.68e-17,54;CL:0000557,3.13e-13,7;CL:0000034,3.71e-12,97;CL:0002031,6.71e-11,25;CL:0000839,3.55e-10,13;CL:0000553,3.96e-10,6;CL:0000556,3.96e-10,6;CL:0002476,3.35e-09,2;CL:0000723,9.51e-09,91;CL:0000048,9.51e-09,91;CL:0000050,8.79e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.58e-17!48;UBERON:0002390!7.85e-15!45;UBERON:0003061!7.85e-15!45;UBERON:0002405!4.02e-14!70;UBERON:0002371!3.52e-13!16;UBERON:0001474!2.44e-10!22;UBERON:0004765!2.44e-10!22;UBERON:0001434!2.44e-10!22;UBERON:0003081!4.05e-07!88 | |ontology_enrichment_uberon=UBERON:0002193!6.58e-17!48;UBERON:0002390!7.85e-15!45;UBERON:0003061!7.85e-15!45;UBERON:0002405!4.02e-14!70;UBERON:0002371!3.52e-13!16;UBERON:0001474!2.44e-10!22;UBERON:0004765!2.44e-10!22;UBERON:0001434!2.44e-10!22;UBERON:0003081!4.05e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.83e-26,16;UBERON:0002384,2.21e-20,46;UBERON:0001474,1.66e-18,22;UBERON:0004765,1.66e-18,22;UBERON:0001434,1.66e-18,22;UBERON:0002204,3.91e-12,32;UBERON:0002193,1.36e-10,48;UBERON:0002405,1.36e-10,48;UBERON:0002390,4.40e-08,45;UBERON:0003061,4.40e-08,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,3.47008381894061,4.9361196098066,5.09267582157636,0,2.87943758482567,2.35079810225042,1.27993938234725,0.22940928106717,0,0,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0,0.837063261473815,0,0,6.47054636834116,2.73218193983378,0.971020706062307,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,3.1496490104849,0,2.1314403448383,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.578397427679647,0,0,0.441683036920787,0,0,0,0,0,7.90779821739074,2.99951365496704,6.4805815807263,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.83082697826187,1.13665399758237,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.690739927463582,0.433947175744535,10.5553898757491,18.4927932498361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0.49465875882444,0.322928853391811,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0.854354403989263,0,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,12.2384469595576,14.6949024939841,15.7547970137043,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,0.513554785824136,0.649604114888975,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,3.47008381894061,4.9361196098066,5.09267582157636,0,2.87943758482567,2.35079810225042,1.27993938234725,0.22940928106717,0,0,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0,0.837063261473815,0,0,6.47054636834116,2.73218193983378,0.971020706062307,0,0,0,0,0,0,0,0,0,3.85899993932794,0,0,0,0,0,0,0,0,0,0,3.1496490104849,0,2.1314403448383,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.578397427679647,0,0,0.441683036920787,0,0,0,0,0,7.90779821739074,2.99951365496704,6.4805815807263,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.83082697826187,1.13665399758237,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.690739927463582,0.433947175744535,10.5553898757491,18.4927932498361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0.49465875882444,0.322928853391811,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0.854354403989263,0,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,12.2384469595576,14.6949024939841,15.7547970137043,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,0.513554785824136,0.649604114888975,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p11@Syk | |short_description=p11@Syk | ||
}} | }} |
Latest revision as of 17:40, 1 October 2015
Short description: | p11@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:512 |
Association with transcript: | 0bp_to_ENSMUST00000140339_5end |
EntrezGene: | Syk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.99e-26 | 19 |
hematopoietic cell | 1.30e-23 | 32 |
hematopoietic oligopotent progenitor cell | 1.30e-23 | 32 |
hematopoietic stem cell | 1.30e-23 | 32 |
hematopoietic multipotent progenitor cell | 1.30e-23 | 32 |
connective tissue cell | 2.21e-20 | 46 |
mesenchymal cell | 2.21e-20 | 46 |
myeloid cell | 1.63e-17 | 16 |
motile cell | 6.68e-17 | 54 |
granulocyte monocyte progenitor cell | 3.13e-13 | 7 |
stem cell | 3.71e-12 | 97 |
hematopoietic lineage restricted progenitor cell | 6.71e-11 | 25 |
myeloid lineage restricted progenitor cell | 3.55e-10 | 13 |
megakaryocyte progenitor cell | 3.96e-10 | 6 |
megakaryocyte | 3.96e-10 | 6 |
bone marrow macrophage | 3.35e-09 | 2 |
somatic stem cell | 9.51e-09 | 91 |
multi fate stem cell | 9.51e-09 | 91 |
megakaryocyte-erythroid progenitor cell | 8.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.83e-26 | 16 |
connective tissue | 2.21e-20 | 46 |
bone element | 1.66e-18 | 22 |
skeletal element | 1.66e-18 | 22 |
skeletal system | 1.66e-18 | 22 |
musculoskeletal system | 3.91e-12 | 32 |
hemolymphoid system | 1.36e-10 | 48 |
immune system | 1.36e-10 | 48 |
hematopoietic system | 4.40e-08 | 45 |
blood island | 4.40e-08 | 45 |