FFCP PHASE1:Mm9::chr6:119280824..119280835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211187 | |EntrezGene=211187 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGX3 | |UniProt=Q8BGX3 | ||
|association_with_transcript=-40bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | |association_with_transcript=-40bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | ||
|cluster_id=chr6:119280824..119280835,- | |||
|description=CAGE_peak_6_at_Lrtm2_5end | |description=CAGE_peak_6_at_Lrtm2_5end | ||
|id=chr6:119280824..119280835,- | |id=chr6:119280824..119280835,- | ||
|ontology_enrichment_celltype=CL:0000117!2.01e-10!23;CL:0000337!2.01e-10!23;CL:0000221!3.36e-10!44;CL:0000133!3.36e-10!44;CL:0002319!2.04e-09!43;CL:0000055!2.25e-07!50;CL:0000540!2.87e-07!33;CL:0000047!2.87e-07!33;CL:0000031!2.87e-07!33;CL:0000404!2.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.41e-14,3;CL:0002614,8.16e-13,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.31e-29!63;UBERON:0001017!3.08e-29!73;UBERON:0005743!3.08e-29!73;UBERON:0000073!3.86e-28!75;UBERON:0001016!3.86e-28!75;UBERON:0000955!6.34e-28!50;UBERON:0006238!6.34e-28!50;UBERON:0001049!1.74e-27!52;UBERON:0005068!1.74e-27!52;UBERON:0006241!1.74e-27!52;UBERON:0007135!1.74e-27!52;UBERON:0002616!1.04e-26!49;UBERON:0004121!1.40e-24!102;UBERON:0000924!1.40e-24!102;UBERON:0006601!1.40e-24!102;UBERON:0002346!1.53e-22!71;UBERON:0003075!1.53e-22!71;UBERON:0007284!1.53e-22!71;UBERON:0002020!1.34e-20!34;UBERON:0007811!1.57e-18!86;UBERON:0003056!9.28e-18!49;UBERON:0003080!4.24e-17!40;UBERON:0002791!5.10e-17!29;UBERON:0003528!5.10e-17!29;UBERON:0001893!5.10e-17!29;UBERON:0000153!5.05e-16!94;UBERON:0002780!7.42e-16!39;UBERON:0001890!7.42e-16!39;UBERON:0006240!7.42e-16!39;UBERON:0002619!1.16e-12!17;UBERON:0003076!1.69e-11!12;UBERON:0003057!1.69e-11!12;UBERON:0000956!1.87e-11!21;UBERON:0001869!1.87e-11!21;UBERON:0000203!1.87e-11!21;UBERON:0002298!1.53e-10!6;UBERON:0002021!2.06e-09!10;UBERON:0000411!2.06e-09!10;UBERON:0001950!2.06e-09!10;UBERON:0004111!6.34e-09!122;UBERON:0000025!1.13e-08!114;UBERON:0002950!1.43e-07!4;UBERON:0001891!1.43e-07!4;UBERON:0009616!1.43e-07!4;UBERON:0000064!2.07e-07!99;UBERON:0004733!6.38e-07!6;UBERON:0004732!6.38e-07!6;UBERON:0002028!6.38e-07!6;UBERON:0007277!6.38e-07!6;UBERON:0002420!6.76e-07!8;UBERON:0007245!6.76e-07!8;UBERON:0010009!6.76e-07!8;UBERON:0010011!6.76e-07!8;UBERON:0000454!6.76e-07!8;UBERON:0000475!7.91e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.56e-24,54;UBERON:0001017,1.48e-21,73;UBERON:0001016,6.75e-21,75;UBERON:0002616,9.77e-20,46;UBERON:0001049,1.74e-19,52;UBERON:0005068,1.74e-19,52;UBERON:0006241,1.74e-19,52;UBERON:0007135,1.74e-19,52;UBERON:0000955,2.94e-19,47;UBERON:0006238,2.94e-19,47;UBERON:0002950,9.86e-17,4;UBERON:0001891,9.86e-17,4;UBERON:0009616,9.86e-17,4;UBERON:0010286,9.86e-17,4;UBERON:0004121,8.15e-16,95;UBERON:0000924,8.15e-16,95;UBERON:0006601,8.15e-16,95;UBERON:0002346,2.73e-15,64;UBERON:0003075,2.73e-15,64;UBERON:0007284,2.73e-15,64;UBERON:0004684,8.41e-14,3;UBERON:0002275,8.41e-14,3;UBERON:0010371,4.80e-13,73;UBERON:0002038,8.16e-13,3;UBERON:0009663,8.16e-13,3;UBERON:0009661,8.16e-13,3;UBERON:0000125,8.16e-13,3;UBERON:0002308,8.16e-13,3;UBERON:0003080,1.21e-12,40;UBERON:0002780,8.77e-11,39;UBERON:0001890,8.77e-11,39;UBERON:0006240,8.77e-11,39;UBERON:0004733,1.09e-10,6;UBERON:0004732,1.09e-10,6;UBERON:0002028,1.09e-10,6;UBERON:0007277,1.09e-10,6;UBERON:0003056,6.07e-10,49;UBERON:0003528,8.11e-10,29;UBERON:0002791,8.11e-10,29;UBERON:0001893,8.11e-10,29;UBERON:0010314,9.69e-10,92;UBERON:0001896,3.91e-09,2;UBERON:0002298,3.91e-09,2;UBERON:0005290,3.91e-09,2;UBERON:0010096,3.91e-09,2;UBERON:0002020,3.52e-08,34;UBERON:0003076,5.60e-08,12;UBERON:0003057,5.60e-08,12;UBERON:0000025,2.79e-07,114 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0.919218786610021,2.20231761998777,6.00130489000382,5.37622866396852,0,0.640413505216868,0,1.3959149950069,1.68828783009504,2.29197371665215,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.69623150928681,0.915001205637253,0.251308704225729,1.56441888173049,1.79000820131231,4.77912502486988,3.24482526135515,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,2.0871576698413,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,2.82375921308533,0.460325236507177,0,1.20297227640581,1.37016503954128,1.5107877947794,0,0.900642406448441,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0.919218786610021,2.20231761998777,6.00130489000382,5.37622866396852,0,0.640413505216868,0,1.3959149950069,1.68828783009504,2.29197371665215,0.294628585473668,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,2.69623150928681,0.915001205637253,0.251308704225729,1.56441888173049,1.79000820131231,4.77912502486988,3.24482526135515,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,2.0871576698413,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,2.82375921308533,0.460325236507177,0,1.20297227640581,1.37016503954128,1.5107877947794,0,0.900642406448441,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p6@Lrtm2 | |short_description=p6@Lrtm2 | ||
}} | }} |
Latest revision as of 13:20, 26 September 2015
Short description: | p6@Lrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lrtm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -40bp_to_ENSMUST00000068351, NM_172492, uc009dmb.2, uc009dmc.2_5end |
EntrezGene: | Lrtm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.41e-14 | 3 |
neuron of the substantia nigra | 8.16e-13 | 3 |