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FFCP PHASE1:Mm9::chr13:111070287..111070302,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67295
|EntrezGene=67295
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9CXS2
|UniProt=Q9CXS2
|association_with_transcript=90bp_to_ENSMUST00000170993_5end
|association_with_transcript=90bp_to_ENSMUST00000170993_5end
|cluster_id=chr13:111070287..111070302,-
|description=CAGE_peak_3_at_Rab3c_5end
|description=CAGE_peak_3_at_Rab3c_5end
|id=chr13:111070287..111070302,-
|id=chr13:111070287..111070302,-
|ontology_enrichment_celltype=CL:0000117!5.27e-14!23;CL:0000337!5.27e-14!23;CL:0000540!1.10e-12!33;CL:0000047!1.10e-12!33;CL:0000031!1.10e-12!33;CL:0000404!1.10e-12!33;CL:0000393!7.13e-10!39;CL:0000211!7.13e-10!39;CL:0000221!8.04e-09!44;CL:0000133!8.04e-09!44;CL:0002319!1.17e-08!43
|ontology_enrichment_celltype=CL:0000117!5.27e-14!23;CL:0000337!5.27e-14!23;CL:0000540!1.10e-12!33;CL:0000047!1.10e-12!33;CL:0000031!1.10e-12!33;CL:0000404!1.10e-12!33;CL:0000393!7.13e-10!39;CL:0000211!7.13e-10!39;CL:0000221!8.04e-09!44;CL:0000133!8.04e-09!44;CL:0002319!1.17e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,6.94e-16,23;CL:0000337,6.94e-16,23;CL:0000540,7.64e-10,33;CL:0000047,7.64e-10,33;CL:0000031,7.64e-10,33;CL:0000404,7.64e-10,33;CL:0000393,9.74e-08,39;CL:0000211,9.74e-08,39;CL:0002610,9.33e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.44e-30!71;UBERON:0003075!5.44e-30!71;UBERON:0007284!5.44e-30!71;UBERON:0000073!1.31e-26!75;UBERON:0001016!1.31e-26!75;UBERON:0004121!1.57e-26!102;UBERON:0000924!1.57e-26!102;UBERON:0006601!1.57e-26!102;UBERON:0001017!3.06e-26!73;UBERON:0005743!3.06e-26!73;UBERON:0000033!1.05e-24!63;UBERON:0001049!6.96e-24!52;UBERON:0005068!6.96e-24!52;UBERON:0006241!6.96e-24!52;UBERON:0007135!6.96e-24!52;UBERON:0000955!3.97e-23!50;UBERON:0006238!3.97e-23!50;UBERON:0002616!2.54e-22!49;UBERON:0003056!1.56e-20!49;UBERON:0002020!8.11e-20!34;UBERON:0003080!5.40e-18!40;UBERON:0002780!4.53e-17!39;UBERON:0001890!4.53e-17!39;UBERON:0006240!4.53e-17!39;UBERON:0002791!1.92e-16!29;UBERON:0003528!1.92e-16!29;UBERON:0001893!1.92e-16!29;UBERON:0007811!1.61e-13!86;UBERON:0000153!7.30e-11!94;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002021!3.53e-10!10;UBERON:0000411!3.53e-10!10;UBERON:0001950!3.53e-10!10;UBERON:0002619!8.52e-09!17;UBERON:0002420!2.25e-07!8;UBERON:0007245!2.25e-07!8;UBERON:0010009!2.25e-07!8;UBERON:0010011!2.25e-07!8;UBERON:0000454!2.25e-07!8
|ontology_enrichment_uberon=UBERON:0002346!5.44e-30!71;UBERON:0003075!5.44e-30!71;UBERON:0007284!5.44e-30!71;UBERON:0000073!1.31e-26!75;UBERON:0001016!1.31e-26!75;UBERON:0004121!1.57e-26!102;UBERON:0000924!1.57e-26!102;UBERON:0006601!1.57e-26!102;UBERON:0001017!3.06e-26!73;UBERON:0005743!3.06e-26!73;UBERON:0000033!1.05e-24!63;UBERON:0001049!6.96e-24!52;UBERON:0005068!6.96e-24!52;UBERON:0006241!6.96e-24!52;UBERON:0007135!6.96e-24!52;UBERON:0000955!3.97e-23!50;UBERON:0006238!3.97e-23!50;UBERON:0002616!2.54e-22!49;UBERON:0003056!1.56e-20!49;UBERON:0002020!8.11e-20!34;UBERON:0003080!5.40e-18!40;UBERON:0002780!4.53e-17!39;UBERON:0001890!4.53e-17!39;UBERON:0006240!4.53e-17!39;UBERON:0002791!1.92e-16!29;UBERON:0003528!1.92e-16!29;UBERON:0001893!1.92e-16!29;UBERON:0007811!1.61e-13!86;UBERON:0000153!7.30e-11!94;UBERON:0000956!1.54e-10!21;UBERON:0001869!1.54e-10!21;UBERON:0000203!1.54e-10!21;UBERON:0002021!3.53e-10!10;UBERON:0000411!3.53e-10!10;UBERON:0001950!3.53e-10!10;UBERON:0002619!8.52e-09!17;UBERON:0002420!2.25e-07!8;UBERON:0007245!2.25e-07!8;UBERON:0010009!2.25e-07!8;UBERON:0010011!2.25e-07!8;UBERON:0000454!2.25e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.66e-37,54;UBERON:0001017,9.50e-34,73;UBERON:0001049,1.96e-33,52;UBERON:0005068,1.96e-33,52;UBERON:0006241,1.96e-33,52;UBERON:0007135,1.96e-33,52;UBERON:0001016,1.43e-32,75;UBERON:0000955,4.60e-29,47;UBERON:0006238,4.60e-29,47;UBERON:0002346,8.17e-29,64;UBERON:0003075,8.17e-29,64;UBERON:0007284,8.17e-29,64;UBERON:0002020,9.20e-28,34;UBERON:0002616,1.16e-27,46;UBERON:0004121,2.65e-26,95;UBERON:0000924,2.65e-26,95;UBERON:0006601,2.65e-26,95;UBERON:0010371,4.33e-24,73;UBERON:0003528,1.48e-23,29;UBERON:0002791,1.48e-23,29;UBERON:0001893,1.48e-23,29;UBERON:0003080,1.64e-23,40;UBERON:0002780,6.48e-22,39;UBERON:0001890,6.48e-22,39;UBERON:0006240,6.48e-22,39;UBERON:0003056,4.69e-21,49;UBERON:0010314,1.48e-19,92;UBERON:0002021,1.98e-18,10;UBERON:0000411,1.98e-18,10;UBERON:0001950,1.98e-18,10;UBERON:0002619,5.52e-14,17;UBERON:0002420,6.01e-13,8;UBERON:0007245,6.01e-13,8;UBERON:0010009,6.01e-13,8;UBERON:0010011,6.01e-13,8;UBERON:0000454,6.01e-13,8;UBERON:0000956,7.09e-13,21;UBERON:0001869,7.09e-13,21;UBERON:0000203,7.09e-13,21;UBERON:0000025,2.24e-10,114;UBERON:0003076,3.49e-10,12;UBERON:0003057,3.49e-10,12;UBERON:0004111,3.91e-09,122;UBERON:0000369,2.96e-08,5;UBERON:0002435,2.96e-08,5;UBERON:0000204,2.96e-08,5;UBERON:0010082,2.96e-08,5;UBERON:0002950,3.60e-08,4;UBERON:0001891,3.60e-08,4;UBERON:0009616,3.60e-08,4;UBERON:0010286,3.60e-08,4;UBERON:0004684,9.33e-07,3;UBERON:0002275,9.33e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,3.80298842103708,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.420649922702764,1.14260393761521,0.883474163806454,0.244981598429908,0.479227355091182,0,6.60695285996332,13.0241084846891,9.21639199537461,3.56092976871523,5.30628332893976,5.73004707612436,6.70039197603314,5.6276261003168,8.55670187550137,2.94628585473668,4.6982654663704,3.72798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0,0.691846491768175,0.150722640552623,1.05829836422134,0.376999773989026,0,0,0,0,0,0.484875253135222,0,6.14839673724249,6.49284791121711,0,0,0,0,15.7280171375064,5.94750783664214,1.13088916901578,9.56033761057521,8.18289463457058,16.6230435647648,12.4925772562173,0,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.0249097622788,0.468508622798644,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,1.13195073617213,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,7.03270119553219,0.163934945376675,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0.292255857911312,0.790575555893047,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,11.9684561491866,6.87474616127276,7.38968684077857,8.22099023724771,7.55393897389701,9.45031500324528,8.55610286126019,11.7817026335893,5.69536342927002,0.31136204275253,0.399024873401031,0.512200817262403,1.21553358534147,0.628839487883947,0.551530525350042,0.666740183404846,0.824140228955577,1.28367683836726,1.76888048234658,0.760437899670719,0.377252682772152,0.842773567228942,0.768301828858431,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,1.23625770240992,1.17759136107518,0.685738504770831,0.70990322463735,0.476872379894642,1.30811774969096,0.376437521661322,0.761531471025089,0.548783918618318,0.789209134313529,0.543216455383447,0.561142271657738,0.949080144993393,0.886540341380071,0.818462086339379,0.619747364743864,0,0.999242311751784,0.701794825336225,0.214871054048298,0.57386499620653,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,3.80298842103708,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.420649922702764,1.14260393761521,0.883474163806454,0.244981598429908,0.479227355091182,0,6.60695285996332,13.0241084846891,9.21639199537461,3.56092976871523,5.30628332893976,5.73004707612436,6.70039197603314,5.6276261003168,8.55670187550137,2.94628585473668,4.6982654663704,3.72798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0,0.691846491768175,0.150722640552623,1.05829836422134,0.376999773989026,0,0,0,0,0,0.484875253135222,0,6.14839673724249,6.49284791121711,0,0,0,0,15.7280171375064,5.94750783664214,1.13088916901578,9.56033761057521,8.18289463457058,16.6230435647648,12.4925772562173,0,0,0,0.210441855886474,0,0.229902104433473,0.360124259610698,0.60281927134286,0.544291993210623,1.0249097622788,0.468508622798644,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,1.13195073617213,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,7.03270119553219,0.163934945376675,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0,0,0.292255857911312,0.790575555893047,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,11.9684561491866,6.87474616127276,7.38968684077857,8.22099023724771,7.55393897389701,9.45031500324528,8.55610286126019,11.7817026335893,5.69536342927002,0.31136204275253,0.399024873401031,0.512200817262403,1.21553358534147,0.628839487883947,0.551530525350042,0.666740183404846,0.824140228955577,1.28367683836726,1.76888048234658,0.760437899670719,0.377252682772152,0.842773567228942,0.768301828858431,0.287177344778066,0.476293691283074,0.231768651889711,0.38581844092741,1.23625770240992,1.17759136107518,0.685738504770831,0.70990322463735,0.476872379894642,1.30811774969096,0.376437521661322,0.761531471025089,0.548783918618318,0.789209134313529,0.543216455383447,0.561142271657738,0.949080144993393,0.886540341380071,0.818462086339379,0.619747364743864,0,0.999242311751784,0.701794825336225,0.214871054048298,0.57386499620653,0,0.231867835620421
|short_description=p3@Rab3c
|short_description=p3@Rab3c
}}
}}

Latest revision as of 02:32, 27 September 2015

Short description:p3@Rab3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rab3c_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 90bp_to_ENSMUST00000170993_5end
EntrezGene:Rab3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rab3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.73
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F216.62
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.66e-3754
central nervous system9.50e-3473
neural tube1.96e-3352
neural rod1.96e-3352
future spinal cord1.96e-3352
neural keel1.96e-3352
nervous system1.43e-3275
brain4.60e-2947
future brain4.60e-2947
neurectoderm8.17e-2964
neural plate8.17e-2964
presumptive neural plate8.17e-2964
gray matter9.20e-2834
regional part of brain1.16e-2746
ectoderm-derived structure2.65e-2695
ectoderm2.65e-2695
presumptive ectoderm2.65e-2695
ecto-epithelium4.33e-2473
brain grey matter1.48e-2329
regional part of telencephalon1.48e-2329
telencephalon1.48e-2329
anterior neural tube1.64e-2340
regional part of forebrain6.48e-2239
forebrain6.48e-2239
future forebrain6.48e-2239
pre-chordal neural plate4.69e-2149
structure with developmental contribution from neural crest1.48e-1992
occipital lobe1.98e-1810
visual cortex1.98e-1810
neocortex1.98e-1810
regional part of cerebral cortex5.52e-1417
basal ganglion6.01e-138
nuclear complex of neuraxis6.01e-138
aggregate regional part of brain6.01e-138
collection of basal ganglia6.01e-138
cerebral subcortex6.01e-138
cerebral cortex7.09e-1321
cerebral hemisphere7.09e-1321
pallium7.09e-1321
tube2.24e-10114
posterior neural tube3.49e-1012
chordal neural plate3.49e-1012
anatomical conduit3.91e-09122
corpus striatum2.96e-085
striatum2.96e-085
ventral part of telencephalon2.96e-085
future corpus striatum2.96e-085
regional part of midbrain3.60e-084
midbrain3.60e-084
presumptive midbrain3.60e-084
midbrain neural tube3.60e-084
raphe nuclei9.33e-073
reticular formation9.33e-073
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