FFCP PHASE1:Mm9::chr5:34142228..34142234,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=504 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:34142228..34142234,+ | |||
|description=CAGE_peak_at_chr5:34142228..34142234,+ | |description=CAGE_peak_at_chr5:34142228..34142234,+ | ||
|id=chr5:34142228..34142234,+ | |id=chr5:34142228..34142234,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.73e-21!66;CL:0002031!1.03e-16!25;CL:0000144!1.12e-16!121;CL:0000012!1.12e-16!121;CL:0000838!8.55e-16!12;CL:0000738!4.39e-15!17;CL:0002087!4.39e-15!17;CL:0000542!2.29e-14!13;CL:0000051!2.29e-14!13;CL:0002371!2.41e-14!118;CL:0000084!3.61e-14!11;CL:0000827!3.61e-14!11;CL:0000548!7.52e-14!115;CL:0000004!7.52e-14!115;CL:0000255!7.52e-14!115;CL:0000988!1.35e-13!32;CL:0002032!1.35e-13!32;CL:0000037!1.35e-13!32;CL:0000566!1.35e-13!32;CL:0000837!1.35e-13!32;CL:0000219!6.33e-13!54;CL:0002320!7.43e-12!46;CL:0000134!7.43e-12!46;CL:0000791!1.62e-11!9;CL:0000789!1.62e-11!9;CL:0002420!1.62e-11!9;CL:0002419!1.62e-11!9;CL:0000790!1.62e-11!9;CL:0002076!3.32e-10!15;CL:0000624!5.40e-10!8;CL:0000066!6.30e-09!25;CL:0000223!1.09e-08!20;CL:0000034!1.94e-08!97;CL:0000893!4.24e-07!6;CL:0002489!4.24e-07!6;CL:0000898!4.24e-07!6;CL:0000809!4.24e-07!6;CL:0000810!4.24e-07!6;CL:0000895!4.24e-07!6;CL:0000808!4.24e-07!6;CL:0000894!4.24e-07!6;CL:0000806!4.24e-07!6;CL:0000807!4.24e-07!6;CL:0000805!4.24e-07!6;CL:0002425!4.24e-07!6;CL:0002436!4.24e-07!6;CL:0002427!4.24e-07!6;CL:0002428!4.24e-07!6;CL:0002429!4.24e-07!6;CL:0002433!4.24e-07!6;CL:0002431!4.24e-07!6;CL:0002432!4.24e-07!6;CL:0002293!5.41e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.46e-30,3;CL:0002076,6.76e-11,15;CL:0000223,2.95e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.43e-12!46;UBERON:0000072!6.96e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,3.29e-09,27;UBERON:0002370,3.10e-07,23;UBERON:0000974,3.10e-07,23;UBERON:0004807,3.10e-07,23;UBERON:0005058,3.10e-07,23;UBERON:0003351,3.10e-07,23;UBERON:0009113,3.10e-07,23;UBERON:0003295,3.10e-07,23;UBERON:0009722,3.10e-07,23;UBERON:0005562,3.10e-07,23;UBERON:0007690,3.10e-07,23;UBERON:0006562,6.04e-07,24;UBERON:0003408,6.04e-07,24;UBERON:0001557,6.04e-07,24;UBERON:0001042,6.04e-07,24;UBERON:0008814,6.04e-07,24;UBERON:0009145,6.04e-07,24 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.700837921786577,0.387369970324729,0.281577444303333,0,0.856089841127525,0.239316476986009,1.02720437958723,0.262261207256992,0,0.607425802169478,0,0.630924330716475,0.411343300817216,0.42438965179803,0,0.0992909512008853,1.56719873483361,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0.7813353445238,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0.838913030288682,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.68014404096107,0.579728977403356,0,0,0,0,0,0,0,0.519572009205738,1.7666978725517,0.14084341977668,3.84979432242953,2.54805239706646,7.11066703153331,0.432982082022428,0.253359865475099,1.01104889002957,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.700837921786577,0.387369970324729,0.281577444303333,0,0.856089841127525,0.239316476986009,1.02720437958723,0.262261207256992,0,0.607425802169478,0,0.630924330716475,0.411343300817216,0.42438965179803,0,0.0992909512008853,1.56719873483361,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0.7813353445238,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0.838913030288682,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.68014404096107,0.579728977403356,0,0,0,0,0,0,0,0.519572009205738,1.7666978725517,0.14084341977668,3.84979432242953,2.54805239706646,7.11066703153331,0.432982082022428,0.253359865475099,1.01104889002957,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.269141569828427,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:34142228..34142234,+ | |short_description=p@chr5:34142228..34142234,+ | ||
}} | }} |
Latest revision as of 08:04, 4 August 2015
Short description: | p@chr5:34142228..34142234, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:34142228..34142234, + |
Coexpression cluster: | MCL_coexpression_mm9:504 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.46e-30 | 3 |
endo-epithelial cell | 6.76e-11 | 15 |
endodermal cell | 2.95e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 3.29e-09 | 27 |
thymus | 3.10e-07 | 23 |
neck | 3.10e-07 | 23 |
respiratory system epithelium | 3.10e-07 | 23 |
hemolymphoid system gland | 3.10e-07 | 23 |
pharyngeal epithelium | 3.10e-07 | 23 |
thymic region | 3.10e-07 | 23 |
pharyngeal gland | 3.10e-07 | 23 |
entire pharyngeal arch endoderm | 3.10e-07 | 23 |
thymus primordium | 3.10e-07 | 23 |
early pharyngeal endoderm | 3.10e-07 | 23 |
pharynx | 6.04e-07 | 24 |
gland of gut | 6.04e-07 | 24 |
upper respiratory tract | 6.04e-07 | 24 |
chordate pharynx | 6.04e-07 | 24 |
pharyngeal arch system | 6.04e-07 | 24 |
pharyngeal region of foregut | 6.04e-07 | 24 |