FFCP PHASE1:Mm9::chr5:136387416..136387428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=856 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:136387416..136387428,- | |||
|description=CAGE_peak_at_chr5:136387416..136387428,- | |description=CAGE_peak_at_chr5:136387416..136387428,- | ||
|id=chr5:136387416..136387428,- | |id=chr5:136387416..136387428,- | ||
|ontology_enrichment_celltype=CL:0000393!2.45e-15!39;CL:0000211!2.45e-15!39;CL:0000540!3.33e-15!33;CL:0000047!3.33e-15!33;CL:0000031!3.33e-15!33;CL:0000404!3.33e-15!33;CL:0002319!9.63e-15!43;CL:0000055!2.24e-14!50;CL:0000221!6.62e-14!44;CL:0000133!6.62e-14!44;CL:0000117!1.88e-13!23;CL:0000337!1.88e-13!23;CL:0002321!1.18e-08!70;CL:0000220!1.18e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.83e-31,23;CL:0000337,9.83e-31,23;CL:0002319,1.51e-26,43;CL:0000221,8.81e-26,44;CL:0000133,8.81e-26,44;CL:0000540,4.18e-24,33;CL:0000047,4.18e-24,33;CL:0000031,4.18e-24,33;CL:0000404,4.18e-24,33;CL:0000393,1.79e-19,39;CL:0000211,1.79e-19,39;CL:0002321,3.02e-16,70;CL:0000723,6.09e-12,91;CL:0000048,6.09e-12,91;CL:0000034,1.07e-11,97;CL:0002614,2.13e-07,3;CL:0002610,3.72e-07,3;CL:0000120,8.40e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.37e-25!73;UBERON:0005743!7.37e-25!73;UBERON:0000073!9.91e-25!75;UBERON:0001016!9.91e-25!75;UBERON:0004121!3.63e-19!102;UBERON:0000924!3.63e-19!102;UBERON:0006601!3.63e-19!102;UBERON:0002020!6.48e-19!34;UBERON:0001049!6.26e-17!52;UBERON:0005068!6.26e-17!52;UBERON:0006241!6.26e-17!52;UBERON:0007135!6.26e-17!52;UBERON:0000955!2.52e-16!50;UBERON:0006238!2.52e-16!50;UBERON:0002346!4.83e-16!71;UBERON:0003075!4.83e-16!71;UBERON:0007284!4.83e-16!71;UBERON:0002616!5.18e-16!49;UBERON:0002791!1.39e-15!29;UBERON:0003528!1.39e-15!29;UBERON:0001893!1.39e-15!29;UBERON:0003080!5.16e-14!40;UBERON:0002780!1.23e-13!39;UBERON:0001890!1.23e-13!39;UBERON:0006240!1.23e-13!39;UBERON:0000033!1.28e-12!63;UBERON:0000956!1.83e-12!21;UBERON:0001869!1.83e-12!21;UBERON:0000203!1.83e-12!21;UBERON:0003056!2.17e-12!49;UBERON:0002619!2.07e-10!17;UBERON:0002021!8.70e-08!10;UBERON:0000411!8.70e-08!10;UBERON:0001950!8.70e-08!10;UBERON:0007811!8.76e-08!86;UBERON:0000153!2.96e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.90e-39,34;UBERON:0001017,3.17e-36,73;UBERON:0001016,5.31e-35,75;UBERON:0000073,3.67e-32,54;UBERON:0003528,4.19e-30,29;UBERON:0002791,4.19e-30,29;UBERON:0001893,4.19e-30,29;UBERON:0001049,1.41e-26,52;UBERON:0005068,1.41e-26,52;UBERON:0006241,1.41e-26,52;UBERON:0007135,1.41e-26,52;UBERON:0004121,1.37e-25,95;UBERON:0000924,1.37e-25,95;UBERON:0006601,1.37e-25,95;UBERON:0000956,2.32e-22,21;UBERON:0001869,2.32e-22,21;UBERON:0000203,2.32e-22,21;UBERON:0002346,1.04e-21,64;UBERON:0003075,1.04e-21,64;UBERON:0007284,1.04e-21,64;UBERON:0002780,8.58e-21,39;UBERON:0001890,8.58e-21,39;UBERON:0006240,8.58e-21,39;UBERON:0003080,4.04e-20,40;UBERON:0002616,5.09e-20,46;UBERON:0000955,1.87e-19,47;UBERON:0006238,1.87e-19,47;UBERON:0002021,6.79e-19,10;UBERON:0000411,6.79e-19,10;UBERON:0001950,6.79e-19,10;UBERON:0010371,4.74e-18,73;UBERON:0002619,7.31e-17,17;UBERON:0003056,2.62e-15,49;UBERON:0010314,1.06e-12,92;UBERON:0001948,3.72e-10,5;UBERON:0002315,3.72e-10,5;UBERON:0000025,1.12e-09,114;UBERON:0011216,4.86e-09,194;UBERON:0002420,1.02e-08,8;UBERON:0007245,1.02e-08,8;UBERON:0010009,1.02e-08,8;UBERON:0010011,1.02e-08,8;UBERON:0000454,1.02e-08,8;UBERON:0004111,1.55e-08,122;UBERON:0002240,2.23e-08,6;UBERON:0005174,2.23e-08,6;UBERON:0001137,2.23e-08,6;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3;UBERON:0004684,3.72e-07,3;UBERON:0002275,3.72e-07,3;UBERON:0003076,5.77e-07,12;UBERON:0003057,5.77e-07,12 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.304130793658544,0.183546752161682,0,0,1.31811709640683,2.13872888981712,1.1198913730029,0,0.335565212115473,0.725362142011344,0,0.514518872071894,0.573066879877513,0.515672092277442,2.22548106945558,5.81890077199236,2.53532561402472,0,0,3.1496490104849,1.97773272513395,2.1314403448383,1.19840044207362,1.92109152660777,1.34796496001021,2.43010688997043,1.47227472945967,2.85650984403804,5.30084498283872,0.857435594504678,1.24599112323707,0.919218786610021,5.50579404996943,3.83062014255563,3.68655679814984,2.2420668914133,3.65950574409639,0,5.30447698102624,3.93933827022176,6.41752640662602,2.35702868378934,4.27115042397309,2.05039390407831,0.454357159999104,0.151143120213571,0,0,2.719885334831,1.61910957491345,0,0.448026887097336,0,0.170430322578058,1.03914401841148,0.35333957451034,0,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.922461989024234,0.150722640552623,0.23517741427141,0.376999773989026,0.494389935468748,0.289198713839823,0,0.485300549842228,0.220841518460394,0.969750506270444,0,1.17112318804619,0.83778682725382,0.255457055208591,0.599075622529601,0,0.127070227073065,0.748953197024114,0.915001205637253,1.13088916901578,1.04294592115366,0.255715457330331,0.62336413367868,0.973447578406546,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0.646703978798527,0,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0.702213187313235,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0,0,0.329119699826961,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0.610953983535943,0,0.280543279561274,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0.482443521363367,0,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,1.60550589987792,0.586058432961016,0.163934945376675,0.252470927204373,1.57754109708128,0.780877488593277,0.646270193198397,0.238968797952552,0.668396022247182,0.849229592366497,0.404810701674894,1.75353514746787,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0.943025398779491,0,0,0,0,0,0,1.05418608574999,0,0.680879211507576,0,0.388076051348264,0,0.177340233642274,0.713475270408282,0,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0.82554747185289,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.404593039154462,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.598066184175915,0.165458490457098,0,0,0.337912250981556,0,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0.443971906748129,0.807424709485281,1.51096154727671,0,0,0,0.214368379079066,0,2.82375921308533,5.9842280745933,2.86447756719698,1.71853182343688,4.7955776383945,1.5107877947794,4.72515750162264,5.40385443869065,4.53142408984205,2.07104124700728,0.415149390336707,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.192909220463705,0,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.290692833264657,0,0.338458431566706,0.182927972872773,0.263069711437843,0.679020569229309,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0,0,0.695603506861264 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|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.304130793658544,0.183546752161682,0,0,1.31811709640683,2.13872888981712,1.1198913730029,0,0.335565212115473,0.725362142011344,0,0.514518872071894,0.573066879877513,0.515672092277442,2.22548106945558,5.81890077199236,2.53532561402472,0,0,3.1496490104849,1.97773272513395,2.1314403448383,1.19840044207362,1.92109152660777,1.34796496001021,2.43010688997043,1.47227472945967,2.85650984403804,5.30084498283872,0.857435594504678,1.24599112323707,0.919218786610021,5.50579404996943,3.83062014255563,3.68655679814984,2.2420668914133,3.65950574409639,0,5.30447698102624,3.93933827022176,6.41752640662602,2.35702868378934,4.27115042397309,2.05039390407831,0.454357159999104,0.151143120213571,0,0,2.719885334831,1.61910957491345,0,0.448026887097336,0,0.170430322578058,1.03914401841148,0.35333957451034,0,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.922461989024234,0.150722640552623,0.23517741427141,0.376999773989026,0.494389935468748,0.289198713839823,0,0.485300549842228,0.220841518460394,0.969750506270444,0,1.17112318804619,0.83778682725382,0.255457055208591,0.599075622529601,0,0.127070227073065,0.748953197024114,0.915001205637253,1.13088916901578,1.04294592115366,0.255715457330331,0.62336413367868,0.973447578406546,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0.646703978798527,0,0.175951124163949,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0.702213187313235,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.697601834251224,0,0,0.329119699826961,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0.610953983535943,0,0.280543279561274,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0.482443521363367,0,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.551873492609465,1.60550589987792,0.586058432961016,0.163934945376675,0.252470927204373,1.57754109708128,0.780877488593277,0.646270193198397,0.238968797952552,0.668396022247182,0.849229592366497,0.404810701674894,1.75353514746787,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0.943025398779491,0,0,0,0,0,0,1.05418608574999,0,0.680879211507576,0,0.388076051348264,0,0.177340233642274,0.713475270408282,0,0.304464949114599,0.469343416127421,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0.82554747185289,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.404593039154462,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.598066184175915,0.165458490457098,0,0,0.337912250981556,0,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0,0.0762068066549998,0.100826185136841,0,0.288635524920988,0.116876902181569,0,0.443971906748129,0.807424709485281,1.51096154727671,0,0,0,0.214368379079066,0,2.82375921308533,5.9842280745933,2.86447756719698,1.71853182343688,4.7955776383945,1.5107877947794,4.72515750162264,5.40385443869065,4.53142408984205,2.07104124700728,0.415149390336707,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.758091635291392,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.192909220463705,0,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.290692833264657,0,0.338458431566706,0.182927972872773,0.263069711437843,0.679020569229309,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0,0,0.695603506861264 | ||
|short_description=p@chr5:136387416..136387428,- | |short_description=p@chr5:136387416..136387428,- | ||
}} | }} |
Latest revision as of 19:47, 3 August 2015
Short description: | p@chr5:136387416..136387428, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136387416..136387428, - |
Coexpression cluster: | MCL_coexpression_mm9:856 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.83e-31 | 23 |
neuroblast (sensu Vertebrata) | 9.83e-31 | 23 |
neural cell | 1.51e-26 | 43 |
ectodermal cell | 8.81e-26 | 44 |
neurectodermal cell | 8.81e-26 | 44 |
neuron | 4.18e-24 | 33 |
neuronal stem cell | 4.18e-24 | 33 |
neuroblast | 4.18e-24 | 33 |
electrically signaling cell | 4.18e-24 | 33 |
electrically responsive cell | 1.79e-19 | 39 |
electrically active cell | 1.79e-19 | 39 |
embryonic cell | 3.02e-16 | 70 |
somatic stem cell | 6.09e-12 | 91 |
multi fate stem cell | 6.09e-12 | 91 |
stem cell | 1.07e-11 | 97 |
neuron of the substantia nigra | 2.13e-07 | 3 |
raphe nuclei neuron | 3.72e-07 | 3 |
granule cell | 8.40e-07 | 3 |