FFCP PHASE1:Mm9::chr12:112398401..112398412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:112398401..112398412,+ | |||
|description=CAGE_peak_at_chr12:112398401..112398412,+ | |description=CAGE_peak_at_chr12:112398401..112398412,+ | ||
|id=chr12:112398401..112398412,+ | |id=chr12:112398401..112398412,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.97e-14!32;CL:0002032!3.97e-14!32;CL:0000037!3.97e-14!32;CL:0000566!3.97e-14!32;CL:0000837!3.97e-14!32;CL:0000838!1.69e-13!12;CL:0002031!2.20e-13!25;CL:0000542!2.81e-12!13;CL:0000051!2.81e-12!13;CL:0000791!3.47e-12!9;CL:0000789!3.47e-12!9;CL:0002420!3.47e-12!9;CL:0002419!3.47e-12!9;CL:0000790!3.47e-12!9;CL:0000084!7.40e-12!11;CL:0000827!7.40e-12!11;CL:0000624!1.73e-10!8;CL:0000738!7.55e-09!17;CL:0002087!7.55e-09!17;CL:0002320!2.14e-08!46;CL:0000134!2.14e-08!46;CL:0000553!4.45e-08!6;CL:0000556!4.45e-08!6;CL:0000893!5.33e-07!6;CL:0002489!5.33e-07!6;CL:0000898!5.33e-07!6;CL:0000809!5.33e-07!6;CL:0000810!5.33e-07!6;CL:0000895!5.33e-07!6;CL:0000808!5.33e-07!6;CL:0000894!5.33e-07!6;CL:0000806!5.33e-07!6;CL:0000807!5.33e-07!6;CL:0000805!5.33e-07!6;CL:0002425!5.33e-07!6;CL:0002436!5.33e-07!6;CL:0002427!5.33e-07!6;CL:0002428!5.33e-07!6;CL:0002429!5.33e-07!6;CL:0002433!5.33e-07!6;CL:0002431!5.33e-07!6;CL:0002432!5.33e-07!6 | |ontology_enrichment_celltype=CL:0000988!3.97e-14!32;CL:0002032!3.97e-14!32;CL:0000037!3.97e-14!32;CL:0000566!3.97e-14!32;CL:0000837!3.97e-14!32;CL:0000838!1.69e-13!12;CL:0002031!2.20e-13!25;CL:0000542!2.81e-12!13;CL:0000051!2.81e-12!13;CL:0000791!3.47e-12!9;CL:0000789!3.47e-12!9;CL:0002420!3.47e-12!9;CL:0002419!3.47e-12!9;CL:0000790!3.47e-12!9;CL:0000084!7.40e-12!11;CL:0000827!7.40e-12!11;CL:0000624!1.73e-10!8;CL:0000738!7.55e-09!17;CL:0002087!7.55e-09!17;CL:0002320!2.14e-08!46;CL:0000134!2.14e-08!46;CL:0000553!4.45e-08!6;CL:0000556!4.45e-08!6;CL:0000893!5.33e-07!6;CL:0002489!5.33e-07!6;CL:0000898!5.33e-07!6;CL:0000809!5.33e-07!6;CL:0000810!5.33e-07!6;CL:0000895!5.33e-07!6;CL:0000808!5.33e-07!6;CL:0000894!5.33e-07!6;CL:0000806!5.33e-07!6;CL:0000807!5.33e-07!6;CL:0000805!5.33e-07!6;CL:0002425!5.33e-07!6;CL:0002436!5.33e-07!6;CL:0002427!5.33e-07!6;CL:0002428!5.33e-07!6;CL:0002429!5.33e-07!6;CL:0002433!5.33e-07!6;CL:0002431!5.33e-07!6;CL:0002432!5.33e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.40e-14,25;CL:0000838,1.93e-12,12;CL:0000542,1.77e-11,13;CL:0000051,1.77e-11,13;CL:0000988,3.27e-11,32;CL:0002032,3.27e-11,32;CL:0000037,3.27e-11,32;CL:0000837,3.27e-11,32;CL:0000791,5.70e-11,9;CL:0000789,5.70e-11,9;CL:0002420,5.70e-11,9;CL:0002419,5.70e-11,9;CL:0000790,5.70e-11,9;CL:0000553,1.21e-09,6;CL:0000556,1.21e-09,6;CL:0000084,5.18e-09,11;CL:0000827,5.18e-09,11;CL:0000738,9.34e-09,17;CL:0002087,9.34e-09,17;CL:0000815,1.20e-07,1;CL:0000792,1.20e-07,1;CL:0002320,1.55e-07,46;CL:0000134,1.55e-07,46;CL:0000624,2.23e-07,8;CL:0000625,3.20e-07,1;CL:0000945,3.67e-07,1;CL:0000236,3.67e-07,1;CL:0000826,3.67e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.73e-08,3;DOID:4045,1.73e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.11e-13!48;UBERON:0002390!2.14e-13!45;UBERON:0003061!2.14e-13!45;UBERON:0004177!1.06e-09!29;UBERON:0002384!2.14e-08!46;UBERON:0003081!1.21e-07!88;UBERON:0002405!1.53e-07!70;UBERON:0002106!2.76e-07!6;UBERON:0004457!2.76e-07!6;UBERON:0000042!2.76e-07!6;UBERON:0004854!2.76e-07!6;UBERON:0009034!2.76e-07!6;UBERON:0002095!2.76e-07!6;UBERON:0004782!2.76e-07!6;UBERON:0003281!2.76e-07!6;UBERON:0009664!2.76e-07!6;UBERON:0002296!2.76e-07!6;UBERON:0005602!2.76e-07!6;UBERON:0001179!2.76e-07!6;UBERON:0006293!2.76e-07!6 | |ontology_enrichment_uberon=UBERON:0002193!1.11e-13!48;UBERON:0002390!2.14e-13!45;UBERON:0003061!2.14e-13!45;UBERON:0004177!1.06e-09!29;UBERON:0002384!2.14e-08!46;UBERON:0003081!1.21e-07!88;UBERON:0002405!1.53e-07!70;UBERON:0002106!2.76e-07!6;UBERON:0004457!2.76e-07!6;UBERON:0000042!2.76e-07!6;UBERON:0004854!2.76e-07!6;UBERON:0009034!2.76e-07!6;UBERON:0002095!2.76e-07!6;UBERON:0004782!2.76e-07!6;UBERON:0003281!2.76e-07!6;UBERON:0009664!2.76e-07!6;UBERON:0002296!2.76e-07!6;UBERON:0005602!2.76e-07!6;UBERON:0001179!2.76e-07!6;UBERON:0006293!2.76e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.55e-07,46;UBERON:0000029,8.26e-07,1;UBERON:0001097,8.26e-07,1;UBERON:0003968,8.26e-07,1;UBERON:0001467,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,4.64843964389675,0.422366166455,0,0.171217968225505,0.0797721589953364,0.513602189793617,1.04904482902797,0.333109761815663,0.404950534779652,0,1.73504190947031,1.91960207048034,1.69755860719212,0.17008658030214,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.0470474879476,2.35292595212406,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,1.51004345451963,2.17608642603403,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.370389054739423,0.188368457004691,0.27338845544205,1.14389086603261,0,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.39736270956253,0.120195449519969,0.443068581523732,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,4.64843964389675,0.422366166455,0,0.171217968225505,0.0797721589953364,0.513602189793617,1.04904482902797,0.333109761815663,0.404950534779652,0,1.73504190947031,1.91960207048034,1.69755860719212,0.17008658030214,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.0470474879476,2.35292595212406,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,1.51004345451963,2.17608642603403,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.370389054739423,0.188368457004691,0.27338845544205,1.14389086603261,0,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.39736270956253,0.120195449519969,0.443068581523732,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr12:112398401..112398412,+ | |short_description=p@chr12:112398401..112398412,+ | ||
}} | }} |
Latest revision as of 18:02, 4 August 2015
Short description: | p@chr12:112398401..112398412, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112398401..112398412, + |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.40e-14 | 25 |
lymphoid lineage restricted progenitor cell | 1.93e-12 | 12 |
lymphocyte | 1.77e-11 | 13 |
common lymphoid progenitor | 1.77e-11 | 13 |
hematopoietic cell | 3.27e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.27e-11 | 32 |
hematopoietic stem cell | 3.27e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.27e-11 | 32 |
mature alpha-beta T cell | 5.70e-11 | 9 |
alpha-beta T cell | 5.70e-11 | 9 |
immature T cell | 5.70e-11 | 9 |
mature T cell | 5.70e-11 | 9 |
immature alpha-beta T cell | 5.70e-11 | 9 |
megakaryocyte progenitor cell | 1.21e-09 | 6 |
megakaryocyte | 1.21e-09 | 6 |
T cell | 5.18e-09 | 11 |
pro-T cell | 5.18e-09 | 11 |
leukocyte | 9.34e-09 | 17 |
nongranular leukocyte | 9.34e-09 | 17 |
regulatory T cell | 1.20e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.20e-07 | 1 |
connective tissue cell | 1.55e-07 | 46 |
mesenchymal cell | 1.55e-07 | 46 |
CD4-positive, alpha-beta T cell | 2.23e-07 | 8 |
CD8-positive, alpha-beta T cell | 3.20e-07 | 1 |
lymphocyte of B lineage | 3.67e-07 | 1 |
B cell | 3.67e-07 | 1 |
pro-B cell | 3.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.55e-07 | 46 |
lymph node | 8.26e-07 | 1 |
axillary lymph node | 8.26e-07 | 1 |
peripheral lymph node | 8.26e-07 | 1 |
shoulder | 8.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.73e-08 | 3 |
muscle cancer | 1.73e-08 | 3 |