FFCP PHASE1:Mm9::chr5:117041791..117041802,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68955 | |EntrezGene=68955 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BKA3 | |UniProt=Q8BKA3 | ||
|association_with_transcript=23bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end | |association_with_transcript=23bp_to_ENSMUST00000076124,NM_026886,uc008zfc.1,uc008zfd.1_5end | ||
|cluster_id=chr5:117041791..117041802,- | |||
|description=CAGE_peak_4_at_Srrm4_5end | |description=CAGE_peak_4_at_Srrm4_5end | ||
|id=chr5:117041791..117041802,- | |id=chr5:117041791..117041802,- | ||
|ontology_enrichment_celltype=CL:0000117!1.65e-18!23;CL:0000337!1.65e-18!23;CL:0000540!2.22e-15!33;CL:0000047!2.22e-15!33;CL:0000031!2.22e-15!33;CL:0000404!2.22e-15!33;CL:0000393!1.92e-11!39;CL:0000211!1.92e-11!39;CL:0000221!5.38e-11!44;CL:0000133!5.38e-11!44;CL:0002319!8.80e-11!43;CL:0000055!6.37e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-29,23;CL:0000337,1.98e-29,23;CL:0000540,3.68e-20,33;CL:0000047,3.68e-20,33;CL:0000031,3.68e-20,33;CL:0000404,3.68e-20,33;CL:0000393,5.10e-16,39;CL:0000211,5.10e-16,39;CL:0002319,6.49e-14,43;CL:0000221,1.89e-13,44;CL:0000133,1.89e-13,44;CL:0002609,6.00e-09,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.16e-35!71;UBERON:0003075!3.16e-35!71;UBERON:0007284!3.16e-35!71;UBERON:0000033!6.81e-32!63;UBERON:0004121!8.08e-32!102;UBERON:0000924!8.08e-32!102;UBERON:0006601!8.08e-32!102;UBERON:0000073!1.27e-31!75;UBERON:0001016!1.27e-31!75;UBERON:0001017!3.58e-31!73;UBERON:0005743!3.58e-31!73;UBERON:0001049!4.74e-30!52;UBERON:0005068!4.74e-30!52;UBERON:0006241!4.74e-30!52;UBERON:0007135!4.74e-30!52;UBERON:0000955!3.75e-29!50;UBERON:0006238!3.75e-29!50;UBERON:0002616!3.48e-28!49;UBERON:0003056!6.17e-28!49;UBERON:0002020!1.32e-25!34;UBERON:0003080!2.54e-24!40;UBERON:0002780!1.83e-23!39;UBERON:0001890!1.83e-23!39;UBERON:0006240!1.83e-23!39;UBERON:0002791!4.16e-22!29;UBERON:0003528!4.16e-22!29;UBERON:0001893!4.16e-22!29;UBERON:0007811!6.77e-18!86;UBERON:0000956!6.54e-16!21;UBERON:0001869!6.54e-16!21;UBERON:0000203!6.54e-16!21;UBERON:0000153!9.59e-15!94;UBERON:0002619!1.41e-12!17;UBERON:0002021!6.21e-11!10;UBERON:0000411!6.21e-11!10;UBERON:0001950!6.21e-11!10;UBERON:0002420!2.46e-07!8;UBERON:0007245!2.46e-07!8;UBERON:0010009!2.46e-07!8;UBERON:0010011!2.46e-07!8;UBERON:0000454!2.46e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.38e-48,54;UBERON:0001049,8.63e-45,52;UBERON:0005068,8.63e-45,52;UBERON:0006241,8.63e-45,52;UBERON:0007135,8.63e-45,52;UBERON:0001017,4.42e-44,73;UBERON:0002346,6.75e-44,64;UBERON:0003075,6.75e-44,64;UBERON:0007284,6.75e-44,64;UBERON:0001016,1.48e-42,75;UBERON:0002020,5.20e-42,34;UBERON:0000955,3.93e-39,47;UBERON:0006238,3.93e-39,47;UBERON:0004121,9.68e-39,95;UBERON:0000924,9.68e-39,95;UBERON:0006601,9.68e-39,95;UBERON:0002616,1.32e-37,46;UBERON:0010371,6.21e-37,73;UBERON:0003528,3.14e-36,29;UBERON:0002791,3.14e-36,29;UBERON:0001893,3.14e-36,29;UBERON:0003056,3.85e-36,49;UBERON:0003080,1.33e-34,40;UBERON:0002780,3.15e-33,39;UBERON:0001890,3.15e-33,39;UBERON:0006240,3.15e-33,39;UBERON:0010314,1.03e-26,92;UBERON:0000956,5.52e-26,21;UBERON:0001869,5.52e-26,21;UBERON:0000203,5.52e-26,21;UBERON:0002619,1.79e-20,17;UBERON:0002021,5.96e-17,10;UBERON:0000411,5.96e-17,10;UBERON:0001950,5.96e-17,10;UBERON:0000025,3.91e-14,114;UBERON:0004111,1.79e-12,122;UBERON:0002420,4.74e-11,8;UBERON:0007245,4.74e-11,8;UBERON:0010009,4.74e-11,8;UBERON:0010011,4.74e-11,8;UBERON:0000454,4.74e-11,8;UBERON:0003076,5.85e-10,12;UBERON:0003057,5.85e-10,12;UBERON:0011216,1.63e-08,194;UBERON:0000483,2.24e-08,174;UBERON:0000119,3.79e-08,176;UBERON:0000369,4.89e-08,5;UBERON:0002435,4.89e-08,5;UBERON:0000204,4.89e-08,5;UBERON:0010082,4.89e-08,5;UBERON:0002240,1.03e-07,6;UBERON:0005174,1.03e-07,6;UBERON:0001137,1.03e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,3.00699875694585,4.45519596494579,3.36519938162211,2.28520787523043,1.10434270475807,3.1847607795888,3.06705507258356,3.67687514644008,5.50579404996943,3.57524546638526,2.15049146558741,4.2203612073662,4.57438218012048,3.64639359389732,1.3959149950069,2.8138130501584,2.29197371665215,3.24091444021034,2.84743361598206,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,4.39171195517321,3.77004072264219,0,0,0,0,3.74476598512057,2.28750301409313,4.27224797183739,5.56237824615285,6.13717097592793,3.1168206683934,4.38051410282946,0,0,0,1.26265113531884,0.390361328888111,0,0.180062129805349,0.452114453507145,2.38127747029647,2.69038812598185,1.78033276663485,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,5.55684906848136,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.81308047821288,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,1.16902343164525,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,1.522324745573,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,4.14292712856459,9.73922372846974,6.01486138202907,4.11049511862385,7.55393897389701,5.40018000185445,4.5032120322422,7.25027854374727,9.31968561153276,0.62272408550506,0.399024873401031,0.512200817262403,1.70174701947806,1.46729213839588,0.367687016900028,0.44449345560323,1.23621034343337,0,0.505394423527595,0,1.13175804831646,0.37456602987953,0.512201219238954,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0,1.03039244094078,0.685738504770831,0.887379030796687,0.953744759789284,1.45346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0,0.644613162144895,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04632921719196,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,3.00699875694585,4.45519596494579,3.36519938162211,2.28520787523043,1.10434270475807,3.1847607795888,3.06705507258356,3.67687514644008,5.50579404996943,3.57524546638526,2.15049146558741,4.2203612073662,4.57438218012048,3.64639359389732,1.3959149950069,2.8138130501584,2.29197371665215,3.24091444021034,2.84743361598206,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,4.39171195517321,3.77004072264219,0,0,0,0,3.74476598512057,2.28750301409313,4.27224797183739,5.56237824615285,6.13717097592793,3.1168206683934,4.38051410282946,0,0,0,1.26265113531884,0.390361328888111,0,0.180062129805349,0.452114453507145,2.38127747029647,2.69038812598185,1.78033276663485,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,5.55684906848136,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.81308047821288,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,1.16902343164525,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,1.522324745573,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,4.14292712856459,9.73922372846974,6.01486138202907,4.11049511862385,7.55393897389701,5.40018000185445,4.5032120322422,7.25027854374727,9.31968561153276,0.62272408550506,0.399024873401031,0.512200817262403,1.70174701947806,1.46729213839588,0.367687016900028,0.44449345560323,1.23621034343337,0,0.505394423527595,0,1.13175804831646,0.37456602987953,0.512201219238954,0.516919220600519,0.476293691283074,0.347652977834566,0.38581844092741,0,1.03039244094078,0.685738504770831,0.887379030796687,0.953744759789284,1.45346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.711810108745045,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0,0.644613162144895,0,0,0 | ||
|short_description=p4@Srrm4 | |short_description=p4@Srrm4 | ||
}} | }} |
Latest revision as of 18:02, 1 October 2015
Short description: | p4@Srrm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Srrm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 23bp_to_ENSMUST00000076124, NM_026886, uc008zfc.1, uc008zfd.1_5end |
EntrezGene: | Srrm4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-29 | 23 |
neuron | 3.68e-20 | 33 |
neuronal stem cell | 3.68e-20 | 33 |
neuroblast | 3.68e-20 | 33 |
electrically signaling cell | 3.68e-20 | 33 |
electrically responsive cell | 5.10e-16 | 39 |
electrically active cell | 5.10e-16 | 39 |
neural cell | 6.49e-14 | 43 |
ectodermal cell | 1.89e-13 | 44 |
neurectodermal cell | 1.89e-13 | 44 |
neuron of cerebral cortex | 6.00e-09 | 6 |