FFCP PHASE1:Mm9::chr11:70468102..70468118,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18643 | |EntrezGene=18643 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SX49 | |UniProt=Q5SX49 | ||
|association_with_transcript=-2bp_to_ENSMUST00000108549_5end | |association_with_transcript=-2bp_to_ENSMUST00000108549_5end | ||
|cluster_id=chr11:70468102..70468118,- | |||
|description=CAGE_peak_2_at_Pfn1_5end | |description=CAGE_peak_2_at_Pfn1_5end | ||
|id=chr11:70468102..70468118,- | |id=chr11:70468102..70468118,- | ||
|ontology_enrichment_celltype=CL:0000988!2.22e-13!32;CL:0002032!2.22e-13!32;CL:0000037!2.22e-13!32;CL:0000566!2.22e-13!32;CL:0000837!2.22e-13!32;CL:0000219!7.64e-13!54;CL:0002320!3.87e-12!46;CL:0000134!3.87e-12!46;CL:0002031!9.68e-12!25;CL:0000063!8.55e-10!66;CL:0000738!4.03e-09!17;CL:0002087!4.03e-09!17;CL:0000049!1.52e-07!19;CL:0000542!4.14e-07!13;CL:0000051!4.14e-07!13;CL:0000838!4.22e-07!12;CL:0000763!5.79e-07!16 | |ontology_enrichment_celltype=CL:0000988!2.22e-13!32;CL:0002032!2.22e-13!32;CL:0000037!2.22e-13!32;CL:0000566!2.22e-13!32;CL:0000837!2.22e-13!32;CL:0000219!7.64e-13!54;CL:0002320!3.87e-12!46;CL:0000134!3.87e-12!46;CL:0002031!9.68e-12!25;CL:0000063!8.55e-10!66;CL:0000738!4.03e-09!17;CL:0002087!4.03e-09!17;CL:0000049!1.52e-07!19;CL:0000542!4.14e-07!13;CL:0000051!4.14e-07!13;CL:0000838!4.22e-07!12;CL:0000763!5.79e-07!16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.22e-13,32;CL:0002032,2.22e-13,32;CL:0000037,2.22e-13,32;CL:0000837,2.22e-13,32;CL:0000219,7.64e-13,54;CL:0002320,3.87e-12,46;CL:0000134,3.87e-12,46;CL:0002031,9.68e-12,25;CL:0000738,4.03e-09,17;CL:0002087,4.03e-09,17;CL:0000049,1.52e-07,19;CL:0000542,4.14e-07,13;CL:0000051,4.14e-07,13;CL:0000838,4.22e-07,12;CL:0000763,5.79e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.50e-15!48;UBERON:0002390!2.48e-13!45;UBERON:0003061!2.48e-13!45;UBERON:0002384!3.87e-12!46;UBERON:0001007!4.87e-10!128;UBERON:0001555!4.87e-10!128;UBERON:0007026!4.87e-10!128;UBERON:0004119!6.00e-10!130;UBERON:0000925!6.00e-10!130;UBERON:0006595!6.00e-10!130;UBERON:0004921!3.16e-09!126;UBERON:0004185!3.16e-09!126;UBERON:0002405!3.19e-09!70;UBERON:0003081!1.10e-08!88;UBERON:0002371!1.88e-07!16;UBERON:0004177!3.58e-07!29 | |ontology_enrichment_uberon=UBERON:0002193!4.50e-15!48;UBERON:0002390!2.48e-13!45;UBERON:0003061!2.48e-13!45;UBERON:0002384!3.87e-12!46;UBERON:0001007!4.87e-10!128;UBERON:0001555!4.87e-10!128;UBERON:0007026!4.87e-10!128;UBERON:0004119!6.00e-10!130;UBERON:0000925!6.00e-10!130;UBERON:0006595!6.00e-10!130;UBERON:0004921!3.16e-09!126;UBERON:0004185!3.16e-09!126;UBERON:0002405!3.19e-09!70;UBERON:0003081!1.10e-08!88;UBERON:0002371!1.88e-07!16;UBERON:0004177!3.58e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.50e-15,48;UBERON:0002405,4.50e-15,48;UBERON:0002390,2.48e-13,45;UBERON:0003061,2.48e-13,45;UBERON:0002384,3.87e-12,46;UBERON:0001007,1.57e-11,116;UBERON:0001555,1.57e-11,116;UBERON:0007026,1.57e-11,116;UBERON:0004119,2.08e-11,118;UBERON:0000925,2.08e-11,118;UBERON:0006595,2.08e-11,118;UBERON:0004921,1.19e-10,114;UBERON:0005409,7.97e-09,47;UBERON:0003081,3.03e-08,87;UBERON:0002371,1.88e-07,16;UBERON:0004177,3.58e-07,29;UBERON:0005057,3.58e-07,29 | |||
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| ||
|short_description=p2@Pfn1 | |short_description=p2@Pfn1 | ||
}} | }} |
Latest revision as of 14:57, 25 September 2015
Short description: | p2@Pfn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pfn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | -2bp_to_ENSMUST00000108549_5end |
EntrezGene: | Pfn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.22e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.22e-13 | 32 |
hematopoietic stem cell | 2.22e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.22e-13 | 32 |
motile cell | 7.64e-13 | 54 |
connective tissue cell | 3.87e-12 | 46 |
mesenchymal cell | 3.87e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 9.68e-12 | 25 |
leukocyte | 4.03e-09 | 17 |
nongranular leukocyte | 4.03e-09 | 17 |
common myeloid progenitor | 1.52e-07 | 19 |
lymphocyte | 4.14e-07 | 13 |
common lymphoid progenitor | 4.14e-07 | 13 |
lymphoid lineage restricted progenitor cell | 4.22e-07 | 12 |
myeloid cell | 5.79e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.50e-15 | 48 |
immune system | 4.50e-15 | 48 |
hematopoietic system | 2.48e-13 | 45 |
blood island | 2.48e-13 | 45 |
connective tissue | 3.87e-12 | 46 |
digestive system | 1.57e-11 | 116 |
digestive tract | 1.57e-11 | 116 |
primitive gut | 1.57e-11 | 116 |
endoderm-derived structure | 2.08e-11 | 118 |
endoderm | 2.08e-11 | 118 |
presumptive endoderm | 2.08e-11 | 118 |
subdivision of digestive tract | 1.19e-10 | 114 |
gastrointestinal system | 7.97e-09 | 47 |
lateral plate mesoderm | 3.03e-08 | 87 |
bone marrow | 1.88e-07 | 16 |
hemopoietic organ | 3.58e-07 | 29 |
immune organ | 3.58e-07 | 29 |