FFCP PHASE1:Mm9::chr11:61890520..61890603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=432572 | |EntrezGene=432572 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q5SXY1 | |UniProt=Q5SXY1 | ||
|association_with_transcript=0bp_to_ENSMUST00000092415,NM_001029936,uc007jin.1_5end | |association_with_transcript=0bp_to_ENSMUST00000092415,NM_001029936,uc007jin.1_5end | ||
|cluster_id=chr11:61890520..61890603,+ | |||
|description=CAGE_peak_1_at_Specc1_5end | |description=CAGE_peak_1_at_Specc1_5end | ||
|id=chr11:61890520..61890603,+ | |id=chr11:61890520..61890603,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.74e-18!70;CL:0000220!1.74e-18!70;CL:0000221!1.03e-12!44;CL:0000133!1.03e-12!44;CL:0002319!2.97e-12!43;CL:0000055!2.09e-11!50;CL:0000540!1.72e-10!33;CL:0000047!1.72e-10!33;CL:0000031!1.72e-10!33;CL:0000404!1.72e-10!33;CL:0000393!2.85e-10!39;CL:0000211!2.85e-10!39;CL:0002076!1.55e-08!15;CL:0000066!5.16e-08!25 | |ontology_enrichment_celltype=CL:0002321!1.74e-18!70;CL:0000220!1.74e-18!70;CL:0000221!1.03e-12!44;CL:0000133!1.03e-12!44;CL:0002319!2.97e-12!43;CL:0000055!2.09e-11!50;CL:0000540!1.72e-10!33;CL:0000047!1.72e-10!33;CL:0000031!1.72e-10!33;CL:0000404!1.72e-10!33;CL:0000393!2.85e-10!39;CL:0000211!2.85e-10!39;CL:0002076!1.55e-08!15;CL:0000066!5.16e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.68e-18,70;CL:0000221,1.01e-12,44;CL:0000133,1.01e-12,44;CL:0002319,2.90e-12,43;CL:0000540,1.69e-10,33;CL:0000047,1.69e-10,33;CL:0000031,1.69e-10,33;CL:0000404,1.69e-10,33;CL:0000393,2.79e-10,39;CL:0000211,2.79e-10,39;CL:0002076,1.53e-08,15;CL:0000066,5.09e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-13!75;UBERON:0001016!1.13e-13!75;UBERON:0001017!1.64e-12!73;UBERON:0005743!1.64e-12!73;UBERON:0004121!6.00e-10!102;UBERON:0000924!6.00e-10!102;UBERON:0006601!6.00e-10!102;UBERON:0000344!5.60e-08!15;UBERON:0002020!1.38e-07!34;UBERON:0000010!6.73e-07!11;UBERON:0001242!7.41e-07!13;UBERON:0000060!7.41e-07!13;UBERON:0001262!7.41e-07!13;UBERON:0004786!7.41e-07!13 | |ontology_enrichment_uberon=UBERON:0000073!1.13e-13!75;UBERON:0001016!1.13e-13!75;UBERON:0001017!1.64e-12!73;UBERON:0005743!1.64e-12!73;UBERON:0004121!6.00e-10!102;UBERON:0000924!6.00e-10!102;UBERON:0006601!6.00e-10!102;UBERON:0000344!5.60e-08!15;UBERON:0002020!1.38e-07!34;UBERON:0000010!6.73e-07!11;UBERON:0001242!7.41e-07!13;UBERON:0000060!7.41e-07!13;UBERON:0001262!7.41e-07!13;UBERON:0004786!7.41e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-13,75;UBERON:0001017,1.60e-12,73;UBERON:0004121,5.41e-12,95;UBERON:0000924,5.41e-12,95;UBERON:0006601,5.41e-12,95;UBERON:0000160,1.97e-10,31;UBERON:0000344,5.52e-08,15;UBERON:0002020,1.36e-07,34;UBERON:0000073,3.73e-07,54;UBERON:0000010,6.65e-07,11;UBERON:0001242,7.32e-07,13;UBERON:0001262,7.32e-07,13;UBERON:0004786,7.32e-07,13;UBERON:0010371,8.87e-07,73 | |||
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| ||
|short_description=p1@Specc1 | |short_description=p1@Specc1 | ||
}} | }} |
Latest revision as of 20:51, 1 October 2015
Short description: | p1@Specc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Specc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000092415, NM_001029936, uc007jin.1_5end |
EntrezGene: | Specc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.68e-18 | 70 |
ectodermal cell | 1.01e-12 | 44 |
neurectodermal cell | 1.01e-12 | 44 |
neural cell | 2.90e-12 | 43 |
neuron | 1.69e-10 | 33 |
neuronal stem cell | 1.69e-10 | 33 |
neuroblast | 1.69e-10 | 33 |
electrically signaling cell | 1.69e-10 | 33 |
electrically responsive cell | 2.79e-10 | 39 |
electrically active cell | 2.79e-10 | 39 |
endo-epithelial cell | 1.53e-08 | 15 |
epithelial cell | 5.09e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.10e-13 | 75 |
central nervous system | 1.60e-12 | 73 |
ectoderm-derived structure | 5.41e-12 | 95 |
ectoderm | 5.41e-12 | 95 |
presumptive ectoderm | 5.41e-12 | 95 |
intestine | 1.97e-10 | 31 |
mucosa | 5.52e-08 | 15 |
gray matter | 1.36e-07 | 34 |
regional part of nervous system | 3.73e-07 | 54 |
peripheral nervous system | 6.65e-07 | 11 |
intestinal mucosa | 7.32e-07 | 13 |
wall of intestine | 7.32e-07 | 13 |
gastrointestinal system mucosa | 7.32e-07 | 13 |
ecto-epithelium | 8.87e-07 | 73 |