FFCP PHASE1:Mm9::chr11:29079435..29079443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=896 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29079435..29079443,+ | |||
|description=CAGE_peak_at_chr11:29079435..29079443,+ | |description=CAGE_peak_at_chr11:29079435..29079443,+ | ||
|id=chr11:29079435..29079443,+ | |id=chr11:29079435..29079443,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.20e-27!115;CL:0000004!1.20e-27!115;CL:0000255!1.20e-27!115;CL:0002371!3.00e-26!118;CL:0000723!4.66e-25!91;CL:0000048!4.66e-25!91;CL:0002319!5.09e-25!43;CL:0000034!6.01e-25!97;CL:0000144!6.36e-25!121;CL:0000012!6.36e-25!121;CL:0000221!4.33e-24!44;CL:0000133!4.33e-24!44;CL:0000055!8.50e-24!50;CL:0002321!3.86e-21!70;CL:0000220!3.86e-21!70;CL:0000540!1.51e-19!33;CL:0000047!1.51e-19!33;CL:0000031!1.51e-19!33;CL:0000404!1.51e-19!33;CL:0000393!4.50e-19!39;CL:0000211!4.50e-19!39;CL:0000117!5.65e-15!23;CL:0000337!5.65e-15!23;CL:0000219!1.11e-12!54;CL:0002320!2.27e-09!46;CL:0000134!2.27e-09!46;CL:0002453!2.46e-07!8;CL:0000839!8.36e-07!13;CL:0002031!8.62e-07!25 | |ontology_enrichment_celltype=CL:0000548!1.20e-27!115;CL:0000004!1.20e-27!115;CL:0000255!1.20e-27!115;CL:0002371!3.00e-26!118;CL:0000723!4.66e-25!91;CL:0000048!4.66e-25!91;CL:0002319!5.09e-25!43;CL:0000034!6.01e-25!97;CL:0000144!6.36e-25!121;CL:0000012!6.36e-25!121;CL:0000221!4.33e-24!44;CL:0000133!4.33e-24!44;CL:0000055!8.50e-24!50;CL:0002321!3.86e-21!70;CL:0000220!3.86e-21!70;CL:0000540!1.51e-19!33;CL:0000047!1.51e-19!33;CL:0000031!1.51e-19!33;CL:0000404!1.51e-19!33;CL:0000393!4.50e-19!39;CL:0000211!4.50e-19!39;CL:0000117!5.65e-15!23;CL:0000337!5.65e-15!23;CL:0000219!1.11e-12!54;CL:0002320!2.27e-09!46;CL:0000134!2.27e-09!46;CL:0002453!2.46e-07!8;CL:0000839!8.36e-07!13;CL:0002031!8.62e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.10e-35,43;CL:0000221,3.51e-34,44;CL:0000133,3.51e-34,44;CL:0002321,5.71e-31,70;CL:0000393,4.65e-28,39;CL:0000211,4.65e-28,39;CL:0000540,8.04e-28,33;CL:0000047,8.04e-28,33;CL:0000031,8.04e-28,33;CL:0000404,8.04e-28,33;CL:0000723,7.78e-25,91;CL:0000048,7.78e-25,91;CL:0000034,1.53e-23,97;CL:0000117,1.68e-20,23;CL:0000337,1.68e-20,23;CL:0002453,2.34e-10,8;CL:0000107,2.40e-09,9;CL:0000128,5.60e-08,6;CL:0000126,5.60e-08,6;CL:0000127,5.60e-08,6;CL:0000333,6.07e-08,10;CL:0000095,6.07e-08,10;CL:0000243,6.07e-08,10;CL:0000123,6.07e-08,10;CL:0000125,6.07e-08,10;CL:0000030,6.07e-08,10;CL:0000339,6.07e-08,10;CL:0000219,1.03e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-19!73;UBERON:0005743!1.72e-19!73;UBERON:0000073!3.47e-19!75;UBERON:0001016!3.47e-19!75;UBERON:0002020!3.98e-17!34;UBERON:0002791!1.66e-13!29;UBERON:0003528!1.66e-13!29;UBERON:0001893!1.66e-13!29;UBERON:0004121!1.62e-11!102;UBERON:0000924!1.62e-11!102;UBERON:0006601!1.62e-11!102;UBERON:0000956!3.52e-11!21;UBERON:0001869!3.52e-11!21;UBERON:0000203!3.52e-11!21;UBERON:0002619!1.42e-10!17;UBERON:0001049!4.86e-10!52;UBERON:0005068!4.86e-10!52;UBERON:0006241!4.86e-10!52;UBERON:0007135!4.86e-10!52;UBERON:0002021!1.76e-09!10;UBERON:0000411!1.76e-09!10;UBERON:0001950!1.76e-09!10;UBERON:0002384!2.27e-09!46;UBERON:0002780!1.51e-08!39;UBERON:0001890!1.51e-08!39;UBERON:0006240!1.51e-08!39;UBERON:0002616!2.54e-08!49;UBERON:0003080!3.99e-08!40;UBERON:0000955!5.76e-08!50;UBERON:0006238!5.76e-08!50;UBERON:0002346!8.04e-08!71;UBERON:0003075!8.04e-08!71;UBERON:0007284!8.04e-08!71 | |ontology_enrichment_uberon=UBERON:0001017!1.72e-19!73;UBERON:0005743!1.72e-19!73;UBERON:0000073!3.47e-19!75;UBERON:0001016!3.47e-19!75;UBERON:0002020!3.98e-17!34;UBERON:0002791!1.66e-13!29;UBERON:0003528!1.66e-13!29;UBERON:0001893!1.66e-13!29;UBERON:0004121!1.62e-11!102;UBERON:0000924!1.62e-11!102;UBERON:0006601!1.62e-11!102;UBERON:0000956!3.52e-11!21;UBERON:0001869!3.52e-11!21;UBERON:0000203!3.52e-11!21;UBERON:0002619!1.42e-10!17;UBERON:0001049!4.86e-10!52;UBERON:0005068!4.86e-10!52;UBERON:0006241!4.86e-10!52;UBERON:0007135!4.86e-10!52;UBERON:0002021!1.76e-09!10;UBERON:0000411!1.76e-09!10;UBERON:0001950!1.76e-09!10;UBERON:0002384!2.27e-09!46;UBERON:0002780!1.51e-08!39;UBERON:0001890!1.51e-08!39;UBERON:0006240!1.51e-08!39;UBERON:0002616!2.54e-08!49;UBERON:0003080!3.99e-08!40;UBERON:0000955!5.76e-08!50;UBERON:0006238!5.76e-08!50;UBERON:0002346!8.04e-08!71;UBERON:0003075!8.04e-08!71;UBERON:0007284!8.04e-08!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.87e-32,73;UBERON:0001016,1.42e-30,75;UBERON:0002020,4.39e-25,34;UBERON:0004121,2.46e-21,95;UBERON:0000924,2.46e-21,95;UBERON:0006601,2.46e-21,95;UBERON:0003528,1.43e-19,29;UBERON:0002791,1.43e-19,29;UBERON:0001893,1.43e-19,29;UBERON:0000073,6.01e-18,54;UBERON:0001049,3.27e-16,52;UBERON:0005068,3.27e-16,52;UBERON:0006241,3.27e-16,52;UBERON:0007135,3.27e-16,52;UBERON:0002619,6.63e-16,17;UBERON:0000956,1.89e-15,21;UBERON:0001869,1.89e-15,21;UBERON:0000203,1.89e-15,21;UBERON:0002346,1.11e-14,64;UBERON:0003075,1.11e-14,64;UBERON:0007284,1.11e-14,64;UBERON:0002021,1.28e-13,10;UBERON:0000411,1.28e-13,10;UBERON:0001950,1.28e-13,10;UBERON:0002780,7.73e-13,39;UBERON:0001890,7.73e-13,39;UBERON:0006240,7.73e-13,39;UBERON:0003080,2.35e-12,40;UBERON:0002616,2.67e-12,46;UBERON:0000955,6.87e-12,47;UBERON:0006238,6.87e-12,47;UBERON:0010371,9.49e-12,73;UBERON:0010314,7.50e-10,92;UBERON:0002410,2.40e-09,9;UBERON:0003056,6.15e-09,49;UBERON:0011216,6.47e-08,194;UBERON:0000025,8.93e-08,114;UBERON:0000010,2.49e-07,11;UBERON:0001948,6.40e-07,5;UBERON:0002315,6.40e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0.70219357896598,0.171217968225505,0.0797721589953364,0,0.262261207256992,0.999329285446988,0,1.39912375625629,0.473193248037357,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,24.131165591466,12.3012957516914,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,2.8343270329458,1.31811709640683,5.63846707315422,5.45947044338914,4.31257693094915,0,0.725362142011344,0,2.05807548828758,3.15186783932632,7.21940929188419,2.22548106945558,8.46385566835253,4.43681982454325,0.677689064138264,5.33576877666684,3.5995988691256,15.8218618010716,16.3410426437603,6.2916023208865,4.2264013585371,1.45165457231869,2.43010688997043,0.630974884054146,5.14171771926846,3.97563373712904,3.30725157880376,1.72521847832825,5.51531271966013,0,2.55374676170375,3.84016333140609,4.3522474950964,2.74462930807229,1.04182674111352,3.07101298901519,5.6276261003168,3.81995619442025,10.9012576625257,3.55929201997757,1.3047961207771,0.075726193333184,0,0.289864488701678,0,2.03991400112325,17.2705021324101,10.3964226791627,10.7526452903361,0,0,0.259786004602869,0,0,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,7.07077388964322,0,0,0,0,0,0,1.26203287766503,2.73307121007647,3.23135096599198,1.19484398976276,2.22798674082394,1.69845918473299,2.42886421004937,2.92255857911312,4.34816555741176,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.887943813496259,0.179427713218951,1.00730769818447,0,0.187682475451182,0.183151624267265,0,0,9.03602948187307,3.22227665555024,7.44764167471216,6.35856774671644,9.59115527678899,14.3524840504043,2.02506750069542,4.5032120322422,3.62513927187364,5.69536342927002,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0.70219357896598,0.171217968225505,0.0797721589953364,0,0.262261207256992,0.999329285446988,0,1.39912375625629,0.473193248037357,0.137114433605739,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,24.131165591466,12.3012957516914,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,2.8343270329458,1.31811709640683,5.63846707315422,5.45947044338914,4.31257693094915,0,0.725362142011344,0,2.05807548828758,3.15186783932632,7.21940929188419,2.22548106945558,8.46385566835253,4.43681982454325,0.677689064138264,5.33576877666684,3.5995988691256,15.8218618010716,16.3410426437603,6.2916023208865,4.2264013585371,1.45165457231869,2.43010688997043,0.630974884054146,5.14171771926846,3.97563373712904,3.30725157880376,1.72521847832825,5.51531271966013,0,2.55374676170375,3.84016333140609,4.3522474950964,2.74462930807229,1.04182674111352,3.07101298901519,5.6276261003168,3.81995619442025,10.9012576625257,3.55929201997757,1.3047961207771,0.075726193333184,0,0.289864488701678,0,2.03991400112325,17.2705021324101,10.3964226791627,10.7526452903361,0,0,0.259786004602869,0,0,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,7.07077388964322,0,0,0,0,0,0,1.26203287766503,2.73307121007647,3.23135096599198,1.19484398976276,2.22798674082394,1.69845918473299,2.42886421004937,2.92255857911312,4.34816555741176,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.887943813496259,0.179427713218951,1.00730769818447,0,0.187682475451182,0.183151624267265,0,0,9.03602948187307,3.22227665555024,7.44764167471216,6.35856774671644,9.59115527678899,14.3524840504043,2.02506750069542,4.5032120322422,3.62513927187364,5.69536342927002,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr11:29079435..29079443,+ | |short_description=p@chr11:29079435..29079443,+ | ||
}} | }} |
Latest revision as of 18:29, 5 August 2015
Short description: | p@chr11:29079435..29079443, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:29079435..29079443, + |
Coexpression cluster: | MCL_coexpression_mm9:896 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.10e-35 | 43 |
ectodermal cell | 3.51e-34 | 44 |
neurectodermal cell | 3.51e-34 | 44 |
embryonic cell | 5.71e-31 | 70 |
electrically responsive cell | 4.65e-28 | 39 |
electrically active cell | 4.65e-28 | 39 |
neuron | 8.04e-28 | 33 |
neuronal stem cell | 8.04e-28 | 33 |
neuroblast | 8.04e-28 | 33 |
electrically signaling cell | 8.04e-28 | 33 |
somatic stem cell | 7.78e-25 | 91 |
multi fate stem cell | 7.78e-25 | 91 |
stem cell | 1.53e-23 | 97 |
CNS neuron (sensu Vertebrata) | 1.68e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-20 | 23 |
oligodendrocyte precursor cell | 2.34e-10 | 8 |
autonomic neuron | 2.40e-09 | 9 |
oligodendrocyte | 5.60e-08 | 6 |
macroglial cell | 5.60e-08 | 6 |
astrocyte | 5.60e-08 | 6 |
migratory neural crest cell | 6.07e-08 | 10 |
neuron associated cell | 6.07e-08 | 10 |
glial cell (sensu Vertebrata) | 6.07e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.07e-08 | 10 |
glial cell | 6.07e-08 | 10 |
glioblast | 6.07e-08 | 10 |
glioblast (sensu Vertebrata) | 6.07e-08 | 10 |
motile cell | 1.03e-07 | 54 |