FFCP PHASE1:Mm9::chr3:95462483..95462510,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:95462483..95462510,- | |||
|description=CAGE_peak_at_chr3:95462483..95462510,- | |description=CAGE_peak_at_chr3:95462483..95462510,- | ||
|id=chr3:95462483..95462510,- | |id=chr3:95462483..95462510,- | ||
|ontology_enrichment_celltype=CL:0000063!1.69e-14!66;CL:0000988!1.33e-11!32;CL:0002032!1.33e-11!32;CL:0000037!1.33e-11!32;CL:0000566!1.33e-11!32;CL:0000837!1.33e-11!32;CL:0002320!7.18e-11!46;CL:0000134!7.18e-11!46;CL:0000219!6.59e-10!54;CL:0000049!8.55e-10!19;CL:0000144!6.09e-09!121;CL:0000012!6.09e-09!121;CL:0002031!2.30e-08!25;CL:0000763!1.34e-07!16;CL:0002371!1.43e-07!118;CL:0000034!4.02e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,7.62e-17,19;CL:0002320,4.99e-16,46;CL:0000134,4.99e-16,46;CL:0000988,8.67e-16,32;CL:0002032,8.67e-16,32;CL:0000037,8.67e-16,32;CL:0000837,8.67e-16,32;CL:0000034,8.25e-14,97;CL:0000219,6.71e-13,54;CL:0000763,1.61e-11,16;CL:0000723,2.59e-11,91;CL:0000048,2.59e-11,91;CL:0002031,3.84e-08,25;CL:0000557,1.90e-07,7;CL:0000839,3.40e-07,13;CL:0002092,6.59e-07,3;CL:0002540,6.59e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.39e-08,3;DOID:4045,2.39e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.19e-13!32;UBERON:0002384!7.18e-11!46;UBERON:0002371!1.90e-09!16;UBERON:0001474!5.18e-09!22;UBERON:0004765!5.18e-09!22;UBERON:0001434!5.18e-09!22;UBERON:0002193!3.21e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.59e-17,16;UBERON:0002384,4.99e-16,46;UBERON:0002204,5.73e-14,32;UBERON:0001474,1.41e-11,22;UBERON:0004765,1.41e-11,22;UBERON:0001434,1.41e-11,22 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0.90739263392049,1.00179145989269,0.671517087647559,0.233612640595526,0.645616617207881,0.703943610758334,1.63845168425395,0.171217968225505,0.239316476986009,0.513602189793617,0.262261207256992,1.66554880907831,0.404950534779652,0,2.68142840554502,2.87940310572051,3.39511721438424,1.87095238332354,1.39007331681239,1.82839852397255,0.159992422793407,0.45881856213434,1.14846392823004,0.430761996159075,0,0,0.252030129759931,0.443461021310609,1.27006134691926,0.61506478758457,0,1.1554064790051,1.16364251750945,0.816677425049476,23.0192396905299,28.1280724028568,23.5585684788209,97.6464270131484,58.7419117064263,24.2755176515577,0.125896817975577,0.709638518536602,0.183546752161682,0,0,0.439372365468944,0,0.139986421625363,0,4.69791296961662,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0.338844532069132,0,1.7997994345628,2.96659908770092,1.4209602298922,0.898800331555214,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.37863096666592,0.453429360640713,12.7540375028738,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.79928715803342,1.29468941823586,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0.662524555381181,0,0,0,0.209446706813455,0,7.42853771936706,7.7987355029143,4.3203877204842,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.622034853050465,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0.567318240503458,0.175951124163949,0,0,0,0,0,2.1066395619397,5.1469581422943,1.13665399758237,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0,0,0,0,0,0.948339504765408,0,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0.315270288212382,0,0.318909537314974,0.491589944147214,0.172684981865896,0.578596234326046,1.50791283939272,3.26343410291226,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.504941854408746,0,0,0.430846795465598,0,0,0,0.404810701674894,0,0,0,0,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0,0.304464949114599,0.469343416127421,0.847328283455281,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0.546776910884101,0.686334519619568,9.34881364966204,6.43776680688827,6.08079884739465,0,0,0,0,0.209088296014469,0,0.269728692769641,0,0,0.259229946583586,0,2.81846469342095,0,0,0,0.516639293910924,0,0,0,0.104859344425711,3.8653459332161,2.30424005006292,0.632022241256357,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | |phase1_expression=0.640595388419176,0.348975407639361,0,0.90739263392049,1.00179145989269,0.671517087647559,0.233612640595526,0.645616617207881,0.703943610758334,1.63845168425395,0.171217968225505,0.239316476986009,0.513602189793617,0.262261207256992,1.66554880907831,0.404950534779652,0,2.68142840554502,2.87940310572051,3.39511721438424,1.87095238332354,1.39007331681239,1.82839852397255,0.159992422793407,0.45881856213434,1.14846392823004,0.430761996159075,0,0,0.252030129759931,0.443461021310609,1.27006134691926,0.61506478758457,0,1.1554064790051,1.16364251750945,0.816677425049476,23.0192396905299,28.1280724028568,23.5585684788209,97.6464270131484,58.7419117064263,24.2755176515577,0.125896817975577,0.709638518536602,0.183546752161682,0,0,0.439372365468944,0,0.139986421625363,0,4.69791296961662,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0.338844532069132,0,1.7997994345628,2.96659908770092,1.4209602298922,0.898800331555214,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.37863096666592,0.453429360640713,12.7540375028738,0,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0.14084341977668,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.79928715803342,1.29468941823586,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0.662524555381181,0,0,0,0.209446706813455,0,7.42853771936706,7.7987355029143,4.3203877204842,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.622034853050465,0.252722758433675,0,0,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0.0937017245597288,0,0,0.567318240503458,0.175951124163949,0,0,0,0,0,2.1066395619397,5.1469581422943,1.13665399758237,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.502670417600539,0,0,0,0,0,0.948339504765408,0,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0.315270288212382,0,0.318909537314974,0.491589944147214,0.172684981865896,0.578596234326046,1.50791283939272,3.26343410291226,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.504941854408746,0,0,0.430846795465598,0,0,0,0.404810701674894,0,0,0,0,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0,0.304464949114599,0.469343416127421,0.847328283455281,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0.546776910884101,0.686334519619568,9.34881364966204,6.43776680688827,6.08079884739465,0,0,0,0,0.209088296014469,0,0.269728692769641,0,0,0.259229946583586,0,2.81846469342095,0,0,0,0.516639293910924,0,0,0,0.104859344425711,3.8653459332161,2.30424005006292,0.632022241256357,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr3:95462483..95462510,- | |short_description=p@chr3:95462483..95462510,- | ||
}} | }} |
Latest revision as of 08:35, 4 August 2015
Short description: | p@chr3:95462483..95462510, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95462483..95462510, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 7.62e-17 | 19 |
connective tissue cell | 4.99e-16 | 46 |
mesenchymal cell | 4.99e-16 | 46 |
hematopoietic cell | 8.67e-16 | 32 |
hematopoietic oligopotent progenitor cell | 8.67e-16 | 32 |
hematopoietic stem cell | 8.67e-16 | 32 |
hematopoietic multipotent progenitor cell | 8.67e-16 | 32 |
stem cell | 8.25e-14 | 97 |
motile cell | 6.71e-13 | 54 |
myeloid cell | 1.61e-11 | 16 |
somatic stem cell | 2.59e-11 | 91 |
multi fate stem cell | 2.59e-11 | 91 |
hematopoietic lineage restricted progenitor cell | 3.84e-08 | 25 |
granulocyte monocyte progenitor cell | 1.90e-07 | 7 |
myeloid lineage restricted progenitor cell | 3.40e-07 | 13 |
bone marrow cell | 6.59e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.59e-17 | 16 |
connective tissue | 4.99e-16 | 46 |
musculoskeletal system | 5.73e-14 | 32 |
bone element | 1.41e-11 | 22 |
skeletal element | 1.41e-11 | 22 |
skeletal system | 1.41e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.39e-08 | 3 |
muscle cancer | 2.39e-08 | 3 |