FFCP PHASE1:Hg19::chr12:9891753..9891758,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9891753..9891758,- | |||
|coexpression_cluster_id=C302 | |||
|description=CAGE_peak_at_chr12:9891753..9891758,- | |description=CAGE_peak_at_chr12:9891753..9891758,- | ||
|id=chr12:9891753..9891758,- | |id=chr12:9891753..9891758,- | ||
|ontology_enrichment_celltype=CL:0000037!1.90e-44!172;CL:0000566!1.90e-44!172;CL:0000988!2.18e-41!182;CL:0002032!4.27e-39!165;CL:0000837!4.27e-39!165;CL:0000738!1.28e-24!140;CL:0000763!1.74e-24!112;CL:0000049!1.74e-24!112;CL:0002031!2.72e-19!124;CL:0002087!1.08e-16!119;CL:0000542!3.81e-13!53;CL:0000051!3.81e-13!53;CL:0000838!1.13e-12!52;CL:0000451!2.06e-12!10;CL:0000990!2.82e-10!8;CL:0000134!1.84e-09!358;CL:0000945!6.92e-09!24;CL:0000826!6.92e-09!24;CL:0002320!9.18e-09!365;CL:0000557!1.63e-07!71;CL:0000840!2.88e-07!5;CL:0001029!2.88e-07!5;CL:0000219!5.71e-07!390;CL:0000839!5.83e-07!70 | |ontology_enrichment_celltype=CL:0000037!1.90e-44!172;CL:0000566!1.90e-44!172;CL:0000988!2.18e-41!182;CL:0002032!4.27e-39!165;CL:0000837!4.27e-39!165;CL:0000738!1.28e-24!140;CL:0000763!1.74e-24!112;CL:0000049!1.74e-24!112;CL:0002031!2.72e-19!124;CL:0002087!1.08e-16!119;CL:0000542!3.81e-13!53;CL:0000051!3.81e-13!53;CL:0000838!1.13e-12!52;CL:0000451!2.06e-12!10;CL:0000990!2.82e-10!8;CL:0000134!1.84e-09!358;CL:0000945!6.92e-09!24;CL:0000826!6.92e-09!24;CL:0002320!9.18e-09!365;CL:0000557!1.63e-07!71;CL:0000840!2.88e-07!5;CL:0001029!2.88e-07!5;CL:0000219!5.71e-07!390;CL:0000839!5.83e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.90e-10;24!CL:0000097;5.60e-08;5!CL:0000236;5.67e-08;13!CL:0000784;7.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.38e-24,168;CL:0002032,1.55e-23,161;CL:0000837,1.55e-23,161;CL:0000988,2.59e-22,177;CL:0000763,4.18e-19,108;CL:0000049,4.18e-19,108;CL:0000945,2.60e-10,24;CL:0000826,2.60e-10,24;CL:0000134,9.18e-09,354;CL:0002320,1.94e-08,361;CL:0000097,3.28e-08,5;CL:0002028,3.28e-08,5;CL:0000236,1.75e-07,14;CL:0000219,2.69e-07,386;CL:0000784,7.36e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.91e-34!51;DOID:0060083!2.91e-34!51;DOID:1240!1.87e-28!39;DOID:8692!4.94e-26!31;DOID:0050686!7.50e-11!137;DOID:0060058!1.86e-07!10;DOID:162!2.31e-07!235;DOID:1036!3.51e-07!8;DOID:14566!7.63e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.08e-44;31!DOID:1240;8.08e-34;39!DOID:2531;5.42e-28;51!DOID:0060083;5.42e-28;51!DOID:1036;3.30e-13;8!DOID:0060058;9.71e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.29e-47,51;DOID:0060083,1.29e-47,51;DOID:8692,1.34e-46,31;DOID:1240,4.68e-40,39;DOID:0050686,3.48e-18,137;DOID:1036,2.98e-13,8;DOID:0060058,8.77e-11,10;DOID:162,1.15e-09,235;DOID:14566,2.52e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-11!102;UBERON:0003061!1.51e-11!102;UBERON:0002193!5.29e-10!112;UBERON:0002384!1.53e-08!375;UBERON:0002405!3.87e-08!115;UBERON:0004177!2.35e-07!7;UBERON:0002371!7.18e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.37e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.57470412614962,0.0787107813136792,0.393364276848904,0,0,0,0.6024118375565,0,4.6480320348181,9.80967704163209,0.293600439334847,0.553995408531877,0,0,0.671746422719773,0.647787332037959,0.77272670290256,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0.546138611262131,1.77901850772711,0,0.800791974072025,0,3.30522436392431,1.90810750907073,0,0,0,1.32171328579026,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0.32592226663359,0.946895611469467,0,0.445641827540694,0,0.221533894583621,0,0.25618263945135,0.650296737799391,0.657751618414705,0,1.15921234294021,0.444859689486181,0,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0,2.49861453104692,0,0,0.201606743224732,0,0.579297615531196,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.97364218096405,0.522389211897802,0.797747763113191,2.14641561874808,3.43196946468077,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,1.97065295158377,1.67292024625129,1.86595303986695,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.672510863961164,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,1.44269212976445,0,0.159426272728822,2.19537308576098,0.191505370132367,1.2700414963433,25.6451332816899,0.280797178113459,2.9670508274315,0,5.01268954180134,2.37008488922245,0.481764225311099,6.25579092292247,6.81353980304522,33.6635237860649,1.53620382154229,0.671028323677248,0.333698283423817,57.6394881436019,32.5735223457434,0,1.35227839237992,1.6653598399891,0,0.37428108081644,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,1.56980256395025,0.664846727600626,1.57916962432026,1.76456280885966,2.01385904371011,0.189753732724185,8.58257526494045,0,1.30586246527318,0.141353071433941,0,0,0.0884575645033392,0,0.889563386041866,0,0,0.202203398942031,0,0,2.55436704901932,0.391329237864179,0,0.394584402849391,0,0,0.568679216656392,13.2284609084753,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.387025325156341,0.65780385377567,0.492692742319255,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,1.02418136999391,0.412079291905832,0.943649613958588,0,0.508039992394707,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0.157363764404994,2.11200673038813,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0.293104467356165,0,0,0,0,0,0.640724475406168,0,0.414239055347196,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,7.20983142705737,3.05589132720735,0.327130788511688,0,0.245772908753719,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,9.60684897942564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0.647782773655864,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0.297046400327086,0,0,0.375935671919414,0.773494655682926,1.99882311849858,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0.633492505057185,0.101988829741982,0,0,3.0084904715085,1.43979526614655,1.60778478093707,0,0,0,0,0.193766729508018,0.620747142958579,0,0.0636471582781649,0,0,0,0.606168477131288,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.57470412614962,0.0787107813136792,0.393364276848904,0,0,0,0.6024118375565,0,4.6480320348181,9.80967704163209,0.293600439334847,0.553995408531877,0,0,0.671746422719773,0.647787332037959,0.77272670290256,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0.546138611262131,1.77901850772711,0,0.800791974072025,0,3.30522436392431,1.90810750907073,0,0,0,1.32171328579026,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0.32592226663359,0.946895611469467,0,0.445641827540694,0,0.221533894583621,0,0.25618263945135,0.650296737799391,0.657751618414705,0,1.15921234294021,0.444859689486181,0,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0,2.49861453104692,0,0,0.201606743224732,0,0.579297615531196,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.97364218096405,0.522389211897802,0.797747763113191,2.14641561874808,3.43196946468077,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,1.97065295158377,1.67292024625129,1.86595303986695,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.672510863961164,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,1.44269212976445,0,0.159426272728822,2.19537308576098,0.191505370132367,1.2700414963433,25.6451332816899,0.280797178113459,2.9670508274315,0,5.01268954180134,2.37008488922245,0.481764225311099,6.25579092292247,6.81353980304522,33.6635237860649,1.53620382154229,0.671028323677248,0.333698283423817,57.6394881436019,32.5735223457434,0,1.35227839237992,1.6653598399891,0,0.37428108081644,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,1.56980256395025,0.664846727600626,1.57916962432026,1.76456280885966,2.01385904371011,0.189753732724185,8.58257526494045,0,1.30586246527318,0.141353071433941,0,0,0.0884575645033392,0,0.889563386041866,0,0,0.202203398942031,0,0,2.55436704901932,0.391329237864179,0,0.394584402849391,0,0,0.568679216656392,13.2284609084753,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.387025325156341,0.65780385377567,0.492692742319255,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,1.02418136999391,0.412079291905832,0.943649613958588,0,0.508039992394707,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0.157363764404994,2.11200673038813,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0.293104467356165,0,0,0,0,0,0.640724475406168,0,0.414239055347196,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,7.20983142705737,3.05589132720735,0.327130788511688,0,0.245772908753719,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,9.60684897942564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0.647782773655864,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0.297046400327086,0,0,0.375935671919414,0.773494655682926,1.99882311849858,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0.633492505057185,0.101988829741982,0,0,3.0084904715085,1.43979526614655,1.60778478093707,0,0,0,0,0.193766729508018,0.620747142958579,0,0.0636471582781649,0,0,0,0.606168477131288,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:9891753..9891758,- | |short_description=p@chr12:9891753..9891758,- | ||
}} | }} |
Latest revision as of 14:03, 24 July 2015
Short description: | p@chr12:9891753..9891758, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9891753..9891758, - |
Coexpression cluster: | C302_acute_peripheral_Neutrophils_NK_myelodysplastic_CD34_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.38e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.55e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-23 | 161 |
hematopoietic cell | 2.59e-22 | 177 |
myeloid cell | 4.18e-19 | 108 |
common myeloid progenitor | 4.18e-19 | 108 |
lymphocyte of B lineage | 2.60e-10 | 24 |
pro-B cell | 2.60e-10 | 24 |
mesenchymal cell | 9.18e-09 | 354 |
connective tissue cell | 1.94e-08 | 361 |
mast cell | 3.28e-08 | 5 |
basophil mast progenitor cell | 3.28e-08 | 5 |
B cell | 1.75e-07 | 14 |
motile cell | 2.69e-07 | 386 |
plasmacytoid dendritic cell | 7.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.37e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.29e-47 | 51 |
immune system cancer | 1.29e-47 | 51 |
myeloid leukemia | 1.34e-46 | 31 |
leukemia | 4.68e-40 | 39 |
organ system cancer | 3.48e-18 | 137 |
chronic leukemia | 2.98e-13 | 8 |
lymphoma | 8.77e-11 | 10 |
cancer | 1.15e-09 | 235 |
disease of cellular proliferation | 2.52e-09 | 239 |