FFCP PHASE1:Hg19::chr12:96588219..96588263,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2004 | |EntrezGene=2004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3325 | |HGNC=3325 | ||
|TSSclassifier=strong | |||
|UniProt=P41970 | |UniProt=P41970 | ||
|association_with_transcript=12bp_to_NM_005230,uc001teo.1_5end | |association_with_transcript=12bp_to_NM_005230,uc001teo.1_5end | ||
|cluster_id=chr12:96588219..96588263,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_ELK3_5end | |description=CAGE_peak_2_at_ELK3_5end | ||
|id=chr12:96588219..96588263,+ | |id=chr12:96588219..96588263,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.39e-17!42;CL:0000860!4.67e-15!45;CL:0002371!6.52e-14!591;CL:0000144!4.52e-11!625;CL:0000003!1.25e-08!722;CL:0002194!3.64e-08!63;CL:0000576!3.64e-08!63;CL:0000040!3.64e-08!63;CL:0000559!3.64e-08!63;CL:0000723!1.16e-07!436;CL:0000048!1.78e-07!430;CL:0002009!1.88e-07!65;CL:0000034!7.96e-07!444 | |ontology_enrichment_celltype=CL:0002057!1.39e-17!42;CL:0000860!4.67e-15!45;CL:0002371!6.52e-14!591;CL:0000144!4.52e-11!625;CL:0000003!1.25e-08!722;CL:0002194!3.64e-08!63;CL:0000576!3.64e-08!63;CL:0000040!3.64e-08!63;CL:0000559!3.64e-08!63;CL:0000723!1.16e-07!436;CL:0000048!1.78e-07!430;CL:0002009!1.88e-07!65;CL:0000034!7.96e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.07e-19;33!CL:0002057;9.07e-19;33!CL:0000473;1.35e-12;39!CL:0000234;1.35e-12;39!CL:0000576;2.32e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-17,42;CL:0002057,1.32e-17,42;CL:0000473,2.05e-14,48;CL:0000234,2.05e-14,48;CL:0002194,1.17e-09,59;CL:0000576,1.17e-09,59;CL:0000040,1.17e-09,59;CL:0000559,1.17e-09,59;CL:0002009,8.87e-09,61;CL:0000723,3.97e-08,433;CL:0000048,6.34e-08,427;CL:0000766,1.73e-07,72;CL:0000557,2.12e-07,67;CL:0000839,2.22e-07,66;CL:0002087,2.82e-07,115;CL:0000034,2.90e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.83e-11!216;UBERON:0002193!9.64e-10!112;UBERON:0002390!4.42e-09!102;UBERON:0003061!4.42e-09!102;UBERON:0002204!1.68e-08!167;UBERON:0002371!4.56e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.19e-11,108;UBERON:0003081,1.42e-10,203;UBERON:0002390,3.22e-10,98;UBERON:0003061,3.22e-10,98;UBERON:0000926,1.35e-09,315;UBERON:0004120,1.35e-09,315;UBERON:0006603,1.35e-09,315;UBERON:0002204,2.12e-09,167;UBERON:0002405,2.56e-09,93;UBERON:0002371,3.55e-08,76;UBERON:0004765,1.03e-07,90;UBERON:0001434,3.34e-07,100 | |||
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| ||
|short_description=p2@ELK3 | |short_description=p2@ELK3 | ||
}} | }} |
Latest revision as of 03:23, 16 September 2015
Short description: | p2@ELK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ELK3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 12bp_to_NM_005230, uc001teo.1_5end |
EntrezGene: | ELK3 |
HGNC: | 3325 |
UniProt: | P41970 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-17 | 42 |
defensive cell | 2.05e-14 | 48 |
phagocyte | 2.05e-14 | 48 |
monopoietic cell | 1.17e-09 | 59 |
monocyte | 1.17e-09 | 59 |
monoblast | 1.17e-09 | 59 |
promonocyte | 1.17e-09 | 59 |
macrophage dendritic cell progenitor | 8.87e-09 | 61 |
somatic stem cell | 3.97e-08 | 433 |
multi fate stem cell | 6.34e-08 | 427 |
myeloid leukocyte | 1.73e-07 | 72 |
granulocyte monocyte progenitor cell | 2.12e-07 | 67 |
myeloid lineage restricted progenitor cell | 2.22e-07 | 66 |
nongranular leukocyte | 2.82e-07 | 115 |
stem cell | 2.90e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.19e-11 | 108 |
lateral plate mesoderm | 1.42e-10 | 203 |
hematopoietic system | 3.22e-10 | 98 |
blood island | 3.22e-10 | 98 |
mesoderm | 1.35e-09 | 315 |
mesoderm-derived structure | 1.35e-09 | 315 |
presumptive mesoderm | 1.35e-09 | 315 |
musculoskeletal system | 2.12e-09 | 167 |
immune system | 2.56e-09 | 93 |
bone marrow | 3.55e-08 | 76 |
skeletal element | 1.03e-07 | 90 |
skeletal system | 3.34e-07 | 100 |