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FFCP PHASE1:Mm9::chr3:36512261..36512289,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71492
|EntrezGene=71492
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8K2G4,D3YXR1
|UniProt=Q8K2G4,D3YXR1
|association_with_transcript=21bp_to_ENSMUST00000040148,ENSMUST00000129671,ENSMUST00000142333,NM_027810,uc008ozp.2,uc008ozq.2,uc008ozr.1_5end
|association_with_transcript=21bp_to_ENSMUST00000040148,ENSMUST00000129671,ENSMUST00000142333,NM_027810,uc008ozp.2,uc008ozq.2,uc008ozr.1_5end
|cluster_id=chr3:36512261..36512289,-
|description=CAGE_peak_2_at_Bbs7_5end
|description=CAGE_peak_2_at_Bbs7_5end
|id=chr3:36512261..36512289,-
|id=chr3:36512261..36512289,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.23e-10!63;UBERON:0003056!2.84e-10!49;UBERON:0002346!3.59e-10!71;UBERON:0003075!3.59e-10!71;UBERON:0007284!3.59e-10!71;UBERON:0000468!1.25e-08!333;UBERON:0000153!7.40e-08!94;UBERON:0000922!1.84e-07!328;UBERON:0001049!2.83e-07!52;UBERON:0005068!2.83e-07!52;UBERON:0006241!2.83e-07!52;UBERON:0007135!2.83e-07!52;UBERON:0000020!6.21e-07!12;UBERON:0001032!6.21e-07!12;UBERON:0004456!6.21e-07!12;UBERON:0000970!7.50e-07!9;UBERON:0000019!7.50e-07!9;UBERON:0000047!7.50e-07!9;UBERON:0004088!7.50e-07!9;UBERON:0002104!7.50e-07!9;UBERON:0001456!7.50e-07!9;UBERON:0003072!7.50e-07!9;UBERON:0003071!7.50e-07!9;UBERON:0004128!7.50e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.31e-11,92;UBERON:0002346,1.57e-10,64;UBERON:0003075,1.57e-10,64;UBERON:0007284,1.57e-10,64;UBERON:0003056,2.86e-10,49;UBERON:0010371,1.43e-09,73;UBERON:0000922,6.86e-08,320;UBERON:0001049,2.94e-07,52;UBERON:0005068,2.94e-07,52;UBERON:0006241,2.94e-07,52;UBERON:0007135,2.94e-07,52;UBERON:0000020,4.09e-07,12;UBERON:0001032,4.09e-07,12;UBERON:0004456,4.09e-07,12;UBERON:0000970,4.98e-07,9;UBERON:0000019,4.98e-07,9;UBERON:0000047,4.98e-07,9;UBERON:0010312,4.98e-07,9;UBERON:0004088,4.98e-07,9;UBERON:0002104,4.98e-07,9;UBERON:0001456,4.98e-07,9;UBERON:0003072,4.98e-07,9;UBERON:0004128,4.98e-07,9;UBERON:0003071,4.98e-07,9;UBERON:0000955,7.93e-07,47;UBERON:0006238,7.93e-07,47
|phase1_expression=4.96461426024861,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0,0.129123323441576,0.281577444303333,0,0,0,0.342401459862411,0.262261207256992,1.33243904726265,0,0.699561878128147,0.315462165358238,0,0,7.90902598404949,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.498703936075477,0.816677425049476,0,0.7813353445238,0,0,0,0,3.52511090331616,2.73717714292689,2.38610777810186,0,0.65407546914134,0.439372365468944,0,0,0,0.671130424230945,0,0.336093799142464,0.257259436035947,2.0057340795713,0,1.41621522601718,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,1.53687322128622,2.07379224616955,2.70011876663381,0.630974884054146,2.28520787523043,2.65042249141936,1.10241719293459,0.958454710182364,1.83843757322004,2.20231761998777,2.42605942361857,0.921639199537461,1.71452174049252,1.64677758484337,2.08365348222704,1.3959149950069,0.56276261003168,3.0559649555362,2.94628585473668,3.98640706237488,3.72798891650601,2.12033341332915,0.982430281388212,1.44932244350839,0,0,0,0.649776417447669,0,1.54488862144927,3.40860645156115,0.779358013808606,2.12003744706204,5.7745802108439,5.13305909657271,2.54805239706646,7.11066703153331,0.865964164044856,0.506719730950197,0.505524445014783,0.79928715803342,0.258937883647172,1.03909497345377,3.46970653532272,2.74018930480927,1.15307748628029,1.80867168663147,3.29248379979973,2.89033160058254,1.23597483867187,0.86759614151947,0.884610551949874,2.42650274921114,0.220841518460394,0.969750506270444,3.72783522436244,5.85561594023094,4.60782754989601,0,0.599075622529601,0,0.254140454146129,5.24267237916879,3.66000482254901,3.26701315493447,5.9100268865374,9.46147192122223,3.74018480207208,5.02947915510049,3.46253837091075,0.995255764880744,0.505445516867349,16.414464759145,6.11566081924707,4.36813998423599,7.02242306240862,6.48030716693575,8.91278138882395,13.8362817907638,12.9308379892426,36.7358786449402,3.66465587985832,4.72765200419548,4.75068035242662,4.16471891612392,4.44875598760957,4.52727816478817,2.46938563689532,4.37875387000685,0,0,1.13665399758237,3.93538967817454,3.75241695969754,2.70093092191522,2.84093682702252,3.54175617145327,4.01094493507183,3.0229412817553,4.56064782379353,2.45207218971056,4.27855609775049,3.2833492815819,2.67527071501324,3.80119967305864,1.3173006917463,1.34206418760372,5.88811855979556,7.10041825417063,0,0,3.41261200856374,2.32236671860439,3.35055399437443,2.62188582010345,2.44615848229357,0.951128130562796,1.42358718463353,1.31759163779209,1.25667604400135,1.1937388322469,1.9496408711912,0.898819408654221,1.08069024937347,1.39398891278057,2.84501851429623,4.11294645395024,9.01661885384643,4.07302655690629,5.04276466635827,4.48869247298039,5.56481526693464,4.57591458736767,3.29697328466887,2.46794327843601,0.889357881261447,1.50160595144485,1.57247196090562,1.57403478669398,1.01430060694251,1.20588579876208,1.2731292589071,0.287696137450811,0.648540907100142,3.0201755450689,1.43768206527355,0.372140947668503,1.24815069245824,0.252578877947112,1.07638448113147,1.92977408545347,2.58654466233247,4.35830247072115,5.70377417547091,3.73439188705414,4.92849521405854,3.68513766371995,4.28478553594825,3.90267295715598,4.88668946729192,5.3151525515706,4.62418829106713,3.4411296090305,3.45369963731791,2.60368305446721,0,0.54390568381871,0.983528546038072,0.275936746304732,5.61927064957272,5.04010252346474,2.95082901678016,2.7771801992481,1.26203287766503,0.390438744296638,1.29254038639679,1.43381278771531,2.22798674082394,3.39691836946599,0,1.16902343164525,1.58115111178609,6.10510501201433,3.69044221541498,3.91744328067962,3.58351310577867,3.29940245945071,0,2.91336763385978,2.11626489875326,1.32023555829129,1.47650946440386,1.22974059177571,2.32585463851399,2.54473610634254,2.13898427030833,0.948110273807448,0,0,6.80879211507576,4.50152735078276,2.97524972700335,3.42939256050548,6.0295679438373,4.8159580752559,5.75921572107423,1.8267896946876,0.704015124191131,0.42366414172764,0,0.98931751764888,2.58343082713449,2.83470747162333,1.55184047204077,1.96969079694074,0.582961673259701,5.00648315428376,0.170870880797853,2.06386867963222,2.59272338317596,1.31857919903284,0.956859594047176,0.915112692826091,1.18984900995699,0.979660166265606,0.414599921413271,0.954670618015114,2.53068794864908,5.08298667817122,2.48412283890143,2.50905955217362,2.40198820120795,1.88810084938749,3.30613822901344,1.83229159388821,1.42576470620972,0.621339313086926,14.6560164057889,4.63501292736334,3.80554528051325,5.25018208528929,3.61647505737647,3.37912250981556,3.16864544343536,6.90083239672936,4.08951443260272,23.1920755992966,21.8902804755978,0.316011120628178,3.64905387522296,3.18403967210964,2.98817892848929,2.50637373934474,1.19208812868759,2.04332264183947,0.886137163047463,1.00966449948148,1.82896335972,1.61321896218945,0.877120926657772,1.05833025804362,1.5193997283604,1.13365191807606,0.443971906748129,0.62799699626633,0.335769232728157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|phase1_expression=4.96461426024861,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0,0.129123323441576,0.281577444303333,0,0,0,0.342401459862411,0.262261207256992,1.33243904726265,0,0.699561878128147,0.315462165358238,0,0,7.90902598404949,0.0992909512008853,0,0,0,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.498703936075477,0.816677425049476,0,0.7813353445238,0,0,0,0,3.52511090331616,2.73717714292689,2.38610777810186,0,0.65407546914134,0.439372365468944,0,0,0,0.671130424230945,0,0.336093799142464,0.257259436035947,2.0057340795713,0,1.41621522601718,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,1.53687322128622,2.07379224616955,2.70011876663381,0.630974884054146,2.28520787523043,2.65042249141936,1.10241719293459,0.958454710182364,1.83843757322004,2.20231761998777,2.42605942361857,0.921639199537461,1.71452174049252,1.64677758484337,2.08365348222704,1.3959149950069,0.56276261003168,3.0559649555362,2.94628585473668,3.98640706237488,3.72798891650601,2.12033341332915,0.982430281388212,1.44932244350839,0,0,0,0.649776417447669,0,1.54488862144927,3.40860645156115,0.779358013808606,2.12003744706204,5.7745802108439,5.13305909657271,2.54805239706646,7.11066703153331,0.865964164044856,0.506719730950197,0.505524445014783,0.79928715803342,0.258937883647172,1.03909497345377,3.46970653532272,2.74018930480927,1.15307748628029,1.80867168663147,3.29248379979973,2.89033160058254,1.23597483867187,0.86759614151947,0.884610551949874,2.42650274921114,0.220841518460394,0.969750506270444,3.72783522436244,5.85561594023094,4.60782754989601,0,0.599075622529601,0,0.254140454146129,5.24267237916879,3.66000482254901,3.26701315493447,5.9100268865374,9.46147192122223,3.74018480207208,5.02947915510049,3.46253837091075,0.995255764880744,0.505445516867349,16.414464759145,6.11566081924707,4.36813998423599,7.02242306240862,6.48030716693575,8.91278138882395,13.8362817907638,12.9308379892426,36.7358786449402,3.66465587985832,4.72765200419548,4.75068035242662,4.16471891612392,4.44875598760957,4.52727816478817,2.46938563689532,4.37875387000685,0,0,1.13665399758237,3.93538967817454,3.75241695969754,2.70093092191522,2.84093682702252,3.54175617145327,4.01094493507183,3.0229412817553,4.56064782379353,2.45207218971056,4.27855609775049,3.2833492815819,2.67527071501324,3.80119967305864,1.3173006917463,1.34206418760372,5.88811855979556,7.10041825417063,0,0,3.41261200856374,2.32236671860439,3.35055399437443,2.62188582010345,2.44615848229357,0.951128130562796,1.42358718463353,1.31759163779209,1.25667604400135,1.1937388322469,1.9496408711912,0.898819408654221,1.08069024937347,1.39398891278057,2.84501851429623,4.11294645395024,9.01661885384643,4.07302655690629,5.04276466635827,4.48869247298039,5.56481526693464,4.57591458736767,3.29697328466887,2.46794327843601,0.889357881261447,1.50160595144485,1.57247196090562,1.57403478669398,1.01430060694251,1.20588579876208,1.2731292589071,0.287696137450811,0.648540907100142,3.0201755450689,1.43768206527355,0.372140947668503,1.24815069245824,0.252578877947112,1.07638448113147,1.92977408545347,2.58654466233247,4.35830247072115,5.70377417547091,3.73439188705414,4.92849521405854,3.68513766371995,4.28478553594825,3.90267295715598,4.88668946729192,5.3151525515706,4.62418829106713,3.4411296090305,3.45369963731791,2.60368305446721,0,0.54390568381871,0.983528546038072,0.275936746304732,5.61927064957272,5.04010252346474,2.95082901678016,2.7771801992481,1.26203287766503,0.390438744296638,1.29254038639679,1.43381278771531,2.22798674082394,3.39691836946599,0,1.16902343164525,1.58115111178609,6.10510501201433,3.69044221541498,3.91744328067962,3.58351310577867,3.29940245945071,0,2.91336763385978,2.11626489875326,1.32023555829129,1.47650946440386,1.22974059177571,2.32585463851399,2.54473610634254,2.13898427030833,0.948110273807448,0,0,6.80879211507576,4.50152735078276,2.97524972700335,3.42939256050548,6.0295679438373,4.8159580752559,5.75921572107423,1.8267896946876,0.704015124191131,0.42366414172764,0,0.98931751764888,2.58343082713449,2.83470747162333,1.55184047204077,1.96969079694074,0.582961673259701,5.00648315428376,0.170870880797853,2.06386867963222,2.59272338317596,1.31857919903284,0.956859594047176,0.915112692826091,1.18984900995699,0.979660166265606,0.414599921413271,0.954670618015114,2.53068794864908,5.08298667817122,2.48412283890143,2.50905955217362,2.40198820120795,1.88810084938749,3.30613822901344,1.83229159388821,1.42576470620972,0.621339313086926,14.6560164057889,4.63501292736334,3.80554528051325,5.25018208528929,3.61647505737647,3.37912250981556,3.16864544343536,6.90083239672936,4.08951443260272,23.1920755992966,21.8902804755978,0.316011120628178,3.64905387522296,3.18403967210964,2.98817892848929,2.50637373934474,1.19208812868759,2.04332264183947,0.886137163047463,1.00966449948148,1.82896335972,1.61321896218945,0.877120926657772,1.05833025804362,1.5193997283604,1.13365191807606,0.443971906748129,0.62799699626633,0.335769232728157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|short_description=p2@Bbs7
|short_description=p2@Bbs7
}}
}}

Latest revision as of 23:36, 1 October 2015

Short description:p2@Bbs7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Bbs7_5end
Coexpression cluster:NA
Association with transcript: 21bp_to_ENSMUST00000040148, ENSMUST00000129671, ENSMUST00000142333, NM_027810, uc008ozp.2, uc008ozq.2, uc008ozr.1_5end
EntrezGene:Bbs7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Bbs7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G416.41
eyeball, embryo E12.CNhs11016.345-16C66.12
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C68.91
eyeball, neonate N01.CNhs11140.1532-43E713.84
eyeball, neonate N02.CNhs11205.1551-44G812.93
eyeball, neonate N16.CNhs11188.777-19A236.74
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G74.49
kidney, neonate N10.CNhs11206.758-6D55.56
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.83
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G514.66
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I46.90
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H323.19
testis, neonate N30.CNhs11130.1391-42E221.89
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.31e-1192
neurectoderm1.57e-1064
neural plate1.57e-1064
presumptive neural plate1.57e-1064
pre-chordal neural plate2.86e-1049
ecto-epithelium1.43e-0973
embryo6.86e-08320
neural tube2.94e-0752
neural rod2.94e-0752
future spinal cord2.94e-0752
neural keel2.94e-0752
sense organ4.09e-0712
sensory system4.09e-0712
entire sense organ system4.09e-0712
eye4.98e-079
camera-type eye4.98e-079
simple eye4.98e-079
immature eye4.98e-079
ocular region4.98e-079
visual system4.98e-079
face4.98e-079
optic cup4.98e-079
optic vesicle4.98e-079
eye primordium4.98e-079
brain7.93e-0747
future brain7.93e-0747
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