FFCP PHASE1:Hg19::chr12:7072354..7072406,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000537269_5end | |association_with_transcript=-2bp_to_ENST00000537269_5end | ||
|cluster_id=chr12:7072354..7072406,+ | |||
|description=CAGE_peak_1_at_ENST00000537269_5end | |description=CAGE_peak_1_at_ENST00000537269_5end | ||
|id=chr12:7072354..7072406,+ | |id=chr12:7072354..7072406,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.13e-29!254;CL:0002076!2.09e-21!43;CL:0000223!1.23e-15!59;CL:0002159!2.26e-12!13;CL:0002368!2.92e-12!13;CL:0002251!1.16e-08!21;CL:0002202!7.81e-08!9;CL:0002632!7.81e-08!9;CL:0002077!3.53e-07!33;CL:0000240!5.03e-07!6;CL:0000311!5.03e-07!6;CL:0000079!5.03e-07!6;CL:0000237!5.03e-07!6;CL:0000036!5.03e-07!6;CL:0000357!5.03e-07!6;CL:0000114!5.03e-07!6;CL:0000362!5.59e-07!8 | |ontology_enrichment_celltype=CL:0000066!1.13e-29!254;CL:0002076!2.09e-21!43;CL:0000223!1.23e-15!59;CL:0002159!2.26e-12!13;CL:0002368!2.92e-12!13;CL:0002251!1.16e-08!21;CL:0002202!7.81e-08!9;CL:0002632!7.81e-08!9;CL:0002077!3.53e-07!33;CL:0000240!5.03e-07!6;CL:0000311!5.03e-07!6;CL:0000079!5.03e-07!6;CL:0000237!5.03e-07!6;CL:0000036!5.03e-07!6;CL:0000357!5.03e-07!6;CL:0000114!5.03e-07!6;CL:0000362!5.59e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.30e-19;42!CL:0002368;1.04e-13;13!CL:0002159;1.35e-12;14!CL:0002251;1.16e-10;20!CL:0002202;1.06e-08;9!CL:0002632;1.06e-08;9!CL:0000240;8.97e-08;6!CL:0000311;8.97e-08;6!CL:0000079;8.97e-08;6!CL:0000237;8.97e-08;6!CL:0002077;5.16e-07;34!CL:0000082;6.01e-07;19!CL:0000244;7.75e-07;4!CL:0000731;7.75e-07;4!CL:0000362;9.72e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.69e-31,253;CL:0002076,4.86e-24,42;CL:0000223,5.81e-18,58;CL:0002368,1.03e-13,13;CL:0002159,1.42e-12,14;CL:0002251,1.36e-10,20;CL:0002202,1.03e-08,9;CL:0002632,1.03e-08,9;CL:0002077,4.66e-08,34;CL:0000240,9.91e-08,6;CL:0000311,9.91e-08,6;CL:0000079,9.91e-08,6;CL:0000237,9.91e-08,6;CL:0000036,9.91e-08,6;CL:0000357,9.91e-08,6;CL:0000114,9.91e-08,6;CL:0000082,5.88e-07,19;CL:0000244,7.54e-07,4;CL:0000731,7.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.38e-09;58!CL:0000357;8.97e-08;6!CL:0000114;8.97e-08;6 | |||
|ontology_enrichment_disease=DOID:305!5.29e-17!106;DOID:1749!1.24e-12!14;DOID:0050687!1.62e-10!143;DOID:299!3.25e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.56e-14;14!DOID:299;2.49e-07;25!DOID:305;3.14e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.25e-17,106;DOID:1749,4.69e-14,14;DOID:0050687,5.09e-11,143;DOID:299,2.19e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.16e-26!169;UBERON:0000925!4.16e-26!169;UBERON:0006595!4.16e-26!169;UBERON:0001007!1.18e-18!155;UBERON:0001555!1.18e-18!155;UBERON:0007026!1.18e-18!155;UBERON:0004921!9.81e-16!129;UBERON:0004185!9.81e-16!129;UBERON:0001004!1.14e-15!72;UBERON:0000464!9.01e-15!104;UBERON:0000077!4.91e-14!130;UBERON:0000466!3.80e-12!126;UBERON:0000065!7.90e-12!53;UBERON:0005153!1.93e-11!37;UBERON:0005911!4.46e-11!82;UBERON:0005178!2.83e-10!34;UBERON:0002224!2.83e-10!34;UBERON:0005156!4.77e-10!59;UBERON:0000990!4.77e-10!59;UBERON:0005181!8.73e-10!35;UBERON:0000161!9.05e-10!35;UBERON:0001008!3.88e-09!45;UBERON:0006554!1.07e-08!44;UBERON:0003133!1.44e-08!48;UBERON:0001041!2.11e-08!98;UBERON:0000915!2.44e-08!52;UBERON:0003101!3.22e-08!22;UBERON:0000079!3.22e-08!22;UBERON:0005157!3.76e-08!51;UBERON:0004175!3.77e-08!25;UBERON:0005631!4.26e-08!14;UBERON:0000158!4.26e-08!14;UBERON:0008947!6.53e-08!38;UBERON:0003258!6.53e-08!38;UBERON:0002048!1.12e-07!22;UBERON:0000117!1.12e-07!22;UBERON:0000171!1.12e-07!22;UBERON:0000170!1.12e-07!22;UBERON:0005597!1.12e-07!22;UBERON:0000118!1.12e-07!22;UBERON:0003135!1.18e-07!11;UBERON:0000062!1.50e-07!511;UBERON:0000072!1.61e-07!46;UBERON:0000058!2.79e-07!26;UBERON:0000468!3.24e-07!659;UBERON:0004807!3.74e-07!28;UBERON:0000166!4.46e-07!21;UBERON:0000344!4.55e-07!12;UBERON:0005177!5.97e-07!107;UBERON:0003064!6.46e-07!37;UBERON:0007196!7.10e-07!14;UBERON:0001558!7.10e-07!14;UBERON:0000922!7.33e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;1.10e-10;34!UBERON:0002224;1.10e-10;34!UBERON:0005181;6.47e-10;35!UBERON:0005911;1.01e-09;36!UBERON:0004921;1.48e-09;33!UBERON:0004807;1.50e-09;22!UBERON:0002048;8.18e-09;22!UBERON:0000117;8.18e-09;22!UBERON:0000171;8.18e-09;22!UBERON:0000170;8.18e-09;22!UBERON:0001555;1.12e-07;54!UBERON:0000365;2.11e-07;5!UBERON:0000065;2.23e-07;44!UBERON:0000344;2.63e-07;20!UBERON:0000974;4.34e-07;6!UBERON:0007196;4.37e-07;15!UBERON:0001558;4.37e-07;15!UBERON:0001004;5.38e-07;65!UBERON:0004802;6.01e-07;19!UBERON:0000115;6.01e-07;19!UBERON:0000161;6.17e-07;19!UBERON:0000166;6.17e-07;19!UBERON:0000915;6.28e-07;52!UBERON:0005409;7.46e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.04e-26,160;UBERON:0000925,2.04e-26,160;UBERON:0006595,2.04e-26,160;UBERON:0001007,1.64e-18,145;UBERON:0001555,1.64e-18,145;UBERON:0007026,1.64e-18,145;UBERON:0004921,3.58e-15,118;UBERON:0001004,1.67e-14,74;UBERON:0005153,2.69e-12,37;UBERON:0005178,6.22e-12,34;UBERON:0002224,6.22e-12,34;UBERON:0005911,1.62e-11,82;UBERON:0005181,2.11e-11,35;UBERON:0005157,1.72e-10,47;UBERON:0000065,2.44e-10,54;UBERON:0000915,4.95e-10,52;UBERON:0000161,5.63e-10,36;UBERON:0001008,1.04e-09,48;UBERON:0006554,3.17e-09,47;UBERON:0005631,4.66e-09,14;UBERON:0000158,4.66e-09,14;UBERON:0002048,8.60e-09,22;UBERON:0000117,8.60e-09,22;UBERON:0000171,8.60e-09,22;UBERON:0000170,8.60e-09,22;UBERON:0005597,8.60e-09,22;UBERON:0000118,8.60e-09,22;UBERON:0001041,1.41e-08,87;UBERON:0005177,3.82e-08,101;UBERON:0008947,8.78e-08,38;UBERON:0003258,8.78e-08,38;UBERON:0000166,1.43e-07,22;UBERON:0000365,2.16e-07,5;UBERON:0000344,2.68e-07,20;UBERON:0007196,4.36e-07,15;UBERON:0001558,4.36e-07,15;UBERON:0004802,5.88e-07,19;UBERON:0000115,5.88e-07,19;UBERON:0003124,8.77e-07,7 | |||
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| ||
|short_description=p1@ENST00000537269 | |short_description=p1@ENST00000537269 | ||
}} | }} |
Latest revision as of 12:06, 24 July 2015
Short description: | p1@ENST00000537269 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000537269_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000537269_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.69e-31 | 253 |
endo-epithelial cell | 4.86e-24 | 42 |
endodermal cell | 5.81e-18 | 58 |
respiratory epithelial cell | 1.03e-13 | 13 |
general ecto-epithelial cell | 1.42e-12 | 14 |
epithelial cell of alimentary canal | 1.36e-10 | 20 |
epithelial cell of tracheobronchial tree | 1.03e-08 | 9 |
epithelial cell of lower respiratory tract | 1.03e-08 | 9 |
ecto-epithelial cell | 4.66e-08 | 34 |
stratified squamous epithelial cell | 9.91e-08 | 6 |
keratin accumulating cell | 9.91e-08 | 6 |
stratified epithelial cell | 9.91e-08 | 6 |
keratinizing barrier epithelial cell | 9.91e-08 | 6 |
epithelial fate stem cell | 9.91e-08 | 6 |
stratified epithelial stem cell | 9.91e-08 | 6 |
surface ectodermal cell | 9.91e-08 | 6 |
epithelial cell of lung | 5.88e-07 | 19 |
transitional epithelial cell | 7.54e-07 | 4 |
urothelial cell | 7.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.25e-17 | 106 |
squamous cell carcinoma | 4.69e-14 | 14 |
cell type cancer | 5.09e-11 | 143 |
adenocarcinoma | 2.19e-07 | 25 |