FFCP PHASE1:Hg19::chr12:57543246..57543251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57543246..57543251,+ | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_at_chr12:57543246..57543251,+ | |description=CAGE_peak_at_chr12:57543246..57543251,+ | ||
|id=chr12:57543246..57543251,+ | |id=chr12:57543246..57543251,+ | ||
|ontology_enrichment_celltype=CL:0000136!6.56e-12!15;CL:0002615!3.06e-07!3;CL:0002334!9.12e-07!12 | |ontology_enrichment_celltype=CL:0000136!6.56e-12!15;CL:0002615!3.06e-07!3;CL:0002334!9.12e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002615;5.98e-34;3!CL:0000511;6.72e-26;1!CL:0002625;6.72e-26;1!CL:0002581;6.72e-26;1!CL:0000216;6.72e-26;1!CL:0000136;5.90e-18;13!CL:0002617;6.43e-14;2!CL:0002549;1.14e-13;2!CL:0002564;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,9.10e-34,3;CL:0000511,3.58e-26,1;CL:0002625,3.58e-26,1;CL:0000216,3.58e-26,1;CL:0002581,4.61e-26,1;CL:0000136,1.31e-15,15;CL:0002617,6.43e-14,2;CL:0002549,1.07e-13,2;CL:0002564,1.54e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.72e-26;1!UBERON:0001343;6.72e-26;1!UBERON:0004910;6.72e-26;1!UBERON:0004813;6.72e-26;1!UBERON:0003688;1.50e-17;6!UBERON:0002358;1.50e-17;6!UBERON:0003684;1.50e-17;6!UBERON:0001178;1.50e-17;6!UBERON:0005629;1.14e-13;2!UBERON:0005358;1.14e-13;2!UBERON:0004909;1.14e-13;2!UBERON:0001886;1.14e-13;2!UBERON:0005406;1.14e-13;2!UBERON:0004086;1.14e-13;2!UBERON:0005282;1.14e-13;2!UBERON:0005281;1.14e-13;2!UBERON:0004457;4.80e-12;9!UBERON:0000042;4.80e-12;9!UBERON:0002242;1.47e-09;3!UBERON:0005904;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.58e-26,1;UBERON:0001343,3.58e-26,1;UBERON:0004910,3.58e-26,1;UBERON:0005154,3.58e-26,1;UBERON:0005295,3.58e-26,1;UBERON:0004813,3.58e-26,1;UBERON:0005297,3.58e-26,1;UBERON:0005294,3.58e-26,1;UBERON:0010141,3.58e-26,1;UBERON:0005891,3.58e-26,1;UBERON:0003688,1.85e-17,6;UBERON:0002358,1.85e-17,6;UBERON:0003684,1.85e-17,6;UBERON:0001178,1.85e-17,6;UBERON:0004909,8.28e-14,2;UBERON:0005406,9.40e-14,2;UBERON:0005629,1.07e-13,2;UBERON:0005358,1.07e-13,2;UBERON:0001886,1.07e-13,2;UBERON:0004086,1.07e-13,2;UBERON:0005282,1.07e-13,2;UBERON:0005281,1.07e-13,2;UBERON:0002242,1.54e-09,3;UBERON:0003068,1.54e-09,3;UBERON:0002328,1.54e-09,3;UBERON:0004880,1.54e-09,3;UBERON:0004457,3.14e-09,12;UBERON:0000042,3.14e-09,12;UBERON:0005904,1.49e-07,4 | |||
|phase1_expression=0.54503513781167,7.92171938396638,0.704772020479856,1.0007329835313,4.02264984984559,0,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.490385709340376,1.21085942115945,0,0,0.312160076830321,0,0,0,0,0,0.61246251376468,0,1.03325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0,1.48418066444991,0.154209693802656,0.532685175939381,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0.54503513781167,7.92171938396638,0.704772020479856,1.0007329835313,4.02264984984559,0,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.490385709340376,1.21085942115945,0,0,0.312160076830321,0,0,0,0,0,0.61246251376468,0,1.03325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.256278298511402,0,0,1.48418066444991,0.154209693802656,0.532685175939381,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr12:57543246..57543251,+ | |short_description=p@chr12:57543246..57543251,+ | ||
}} | }} |
Latest revision as of 10:34, 24 July 2015
Short description: | p@chr12:57543246..57543251, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57543246..57543251, + |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 9.10e-34 | 3 |
androgen binding protein secreting cell | 3.58e-26 | 1 |
seminiferous tubule epithelial cell | 3.58e-26 | 1 |
Sertoli cell | 3.58e-26 | 1 |
perirenal preadipocyte | 4.61e-26 | 1 |
fat cell | 1.31e-15 | 15 |
adipocyte of breast | 6.43e-14 | 2 |
fibroblast of choroid plexus | 1.07e-13 | 2 |
nucleus pulposus cell of intervertebral disc | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.58e-26 | 1 |
seminiferous tubule of testis | 3.58e-26 | 1 |
epithelium of male gonad | 3.58e-26 | 1 |
epithelial cord | 3.58e-26 | 1 |
sex cord | 3.58e-26 | 1 |
seminiferous tubule epithelium | 3.58e-26 | 1 |
testis sex cord | 3.58e-26 | 1 |
genital ridge | 3.58e-26 | 1 |
primitive sex cord of indifferent gonad | 3.58e-26 | 1 |
coelomic epithelium | 3.58e-26 | 1 |
omentum | 1.85e-17 | 6 |
peritoneum | 1.85e-17 | 6 |
abdominal cavity | 1.85e-17 | 6 |
visceral peritoneum | 1.85e-17 | 6 |
epithelium of gonad | 8.28e-14 | 2 |
perirenal fat | 9.40e-14 | 2 |
vascular plexus | 1.07e-13 | 2 |
ventricle of nervous system | 1.07e-13 | 2 |
choroid plexus | 1.07e-13 | 2 |
brain ventricle | 1.07e-13 | 2 |
ventricular system of brain | 1.07e-13 | 2 |
ventricular system of central nervous system | 1.07e-13 | 2 |
nucleus pulposus | 1.54e-09 | 3 |
axial mesoderm | 1.54e-09 | 3 |
notochord | 1.54e-09 | 3 |
chordamesoderm | 1.54e-09 | 3 |
cavity lining | 3.14e-09 | 12 |
serous membrane | 3.14e-09 | 12 |
duct of male reproductive system | 1.49e-07 | 4 |