FFCP PHASE1:Hg19::chr12:57351425..57351427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8608 | |EntrezGene=8608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29674 | |HGNC=29674 | ||
|TSSclassifier=strong | |||
|UniProt=O75452 | |UniProt=O75452 | ||
|association_with_transcript=-7bp_to_NM_003708,uc001smi.3,uc009zpa.2_5end | |association_with_transcript=-7bp_to_NM_003708,uc001smi.3,uc009zpa.2_5end | ||
|cluster_id=chr12:57351425..57351427,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_RDH16_5end | |description=CAGE_peak_8_at_RDH16_5end | ||
|id=chr12:57351425..57351427,- | |id=chr12:57351425..57351427,- | ||
|ontology_enrichment_celltype=CL:0000181!2.57e-14!12;CL:0000417!2.57e-14!12;CL:0000668!2.57e-14!12;CL:0000414!2.57e-14!12;CL:0000412!2.57e-14!12;CL:0000182!2.57e-14!12 | |ontology_enrichment_celltype=CL:0000181!2.57e-14!12;CL:0000417!2.57e-14!12;CL:0000668!2.57e-14!12;CL:0000414!2.57e-14!12;CL:0000412!2.57e-14!12;CL:0000182!2.57e-14!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.33e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.31e-19!19;UBERON:0006925!1.31e-19!19;UBERON:0008836!1.31e-19!19;UBERON:0008835!4.60e-17!22;UBERON:0003894!4.60e-17!22;UBERON:0009854!2.31e-16!23;UBERON:0007499!3.99e-15!25;UBERON:0009497!3.99e-15!25;UBERON:0000015!3.99e-15!25;UBERON:0002423!3.99e-15!25;UBERON:0006235!3.99e-15!25;UBERON:0004161!3.99e-15!25;UBERON:0005057!1.41e-14!26;UBERON:0009856!1.41e-14!26;UBERON:0002365!2.30e-12!31;UBERON:0002330!2.30e-12!31;UBERON:0002368!4.78e-11!35;UBERON:0000949!9.12e-09!45;UBERON:0003929!1.99e-07!54;UBERON:0005172!2.63e-07!55;UBERON:0005173!2.63e-07!55;UBERON:0002530!7.38e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;9.12e-16;31!UBERON:0002330;9.12e-16;31!UBERON:0002368;4.77e-12;33!UBERON:0000949;2.00e-10;43!UBERON:0005172;1.87e-08;52!UBERON:0005173;1.87e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60 | |||
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|short_description=p8@RDH16 | |short_description=p8@RDH16 | ||
}} | }} |
Latest revision as of 12:32, 19 September 2015
Short description: | p8@RDH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RDH16_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -7bp_to_NM_003708, uc001smi.3, uc009zpa.2_5end |
EntrezGene: | RDH16 |
HGNC: | 29674 |
UniProt: | O75452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |