FFCP PHASE1:Mm9::chr10:101621634..101621652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67569 | |EntrezGene=67569 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D306 | |UniProt=Q9D306 | ||
|association_with_transcript=-60bp_to_ENSMUST00000020039,NM_001162369,uc007gyc.2_5end | |association_with_transcript=-60bp_to_ENSMUST00000020039,NM_001162369,uc007gyc.2_5end | ||
|cluster_id=chr10:101621634..101621652,+ | |||
|description=CAGE_peak_10_at_Mgat4c_5end | |description=CAGE_peak_10_at_Mgat4c_5end | ||
|id=chr10:101621634..101621652,+ | |id=chr10:101621634..101621652,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.97e-20!71;UBERON:0003075!8.97e-20!71;UBERON:0007284!8.97e-20!71;UBERON:0004121!4.49e-13!102;UBERON:0000924!4.49e-13!102;UBERON:0006601!4.49e-13!102;UBERON:0003056!7.40e-12!49;UBERON:0000033!4.98e-11!63;UBERON:0001049!1.23e-09!52;UBERON:0005068!1.23e-09!52;UBERON:0006241!1.23e-09!52;UBERON:0007135!1.23e-09!52;UBERON:0000970!7.65e-09!9;UBERON:0000019!7.65e-09!9;UBERON:0000047!7.65e-09!9;UBERON:0004088!7.65e-09!9;UBERON:0002104!7.65e-09!9;UBERON:0001456!7.65e-09!9;UBERON:0003072!7.65e-09!9;UBERON:0003071!7.65e-09!9;UBERON:0004128!7.65e-09!9;UBERON:0002369!7.25e-08!7;UBERON:0006858!7.25e-08!7;UBERON:0002616!1.82e-07!49;UBERON:0000955!3.71e-07!50;UBERON:0006238!3.71e-07!50;UBERON:0001444!9.93e-07!11 | |ontology_enrichment_uberon=UBERON:0002346!8.97e-20!71;UBERON:0003075!8.97e-20!71;UBERON:0007284!8.97e-20!71;UBERON:0004121!4.49e-13!102;UBERON:0000924!4.49e-13!102;UBERON:0006601!4.49e-13!102;UBERON:0003056!7.40e-12!49;UBERON:0000033!4.98e-11!63;UBERON:0001049!1.23e-09!52;UBERON:0005068!1.23e-09!52;UBERON:0006241!1.23e-09!52;UBERON:0007135!1.23e-09!52;UBERON:0000970!7.65e-09!9;UBERON:0000019!7.65e-09!9;UBERON:0000047!7.65e-09!9;UBERON:0004088!7.65e-09!9;UBERON:0002104!7.65e-09!9;UBERON:0001456!7.65e-09!9;UBERON:0003072!7.65e-09!9;UBERON:0003071!7.65e-09!9;UBERON:0004128!7.65e-09!9;UBERON:0002369!7.25e-08!7;UBERON:0006858!7.25e-08!7;UBERON:0002616!1.82e-07!49;UBERON:0000955!3.71e-07!50;UBERON:0006238!3.71e-07!50;UBERON:0001444!9.93e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.78e-12,9;UBERON:0000019,8.78e-12,9;UBERON:0000047,8.78e-12,9;UBERON:0010312,8.78e-12,9;UBERON:0004088,8.78e-12,9;UBERON:0002104,8.78e-12,9;UBERON:0001456,8.78e-12,9;UBERON:0003072,8.78e-12,9;UBERON:0004128,8.78e-12,9;UBERON:0003071,8.78e-12,9;UBERON:0010314,2.81e-10,92;UBERON:0001444,1.11e-09,11;UBERON:0000020,6.84e-09,12;UBERON:0001032,6.84e-09,12;UBERON:0004456,6.84e-09,12;UBERON:0002369,7.09e-09,7;UBERON:0006858,7.09e-09,7;UBERON:0002346,9.25e-09,64;UBERON:0003075,9.25e-09,64;UBERON:0007284,9.25e-09,64;UBERON:0000033,3.19e-08,13;UBERON:0005085,3.19e-08,13;UBERON:0002259,1.14e-07,1;UBERON:0002314,1.14e-07,1;UBERON:0004061,1.14e-07,1;UBERON:0006777,1.14e-07,1;UBERON:0005882,1.14e-07,1;UBERON:0010371,1.56e-07,73;UBERON:0003056,1.68e-07,49 | |||
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| ||
|short_description=p10@Mgat4c | |short_description=p10@Mgat4c | ||
}} | }} |
Latest revision as of 13:30, 25 September 2015
Short description: | p10@Mgat4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Mgat4c_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENSMUST00000020039, NM_001162369, uc007gyc.2_5end |
EntrezGene: | Mgat4c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.78e-12 | 9 |
camera-type eye | 8.78e-12 | 9 |
simple eye | 8.78e-12 | 9 |
immature eye | 8.78e-12 | 9 |
ocular region | 8.78e-12 | 9 |
visual system | 8.78e-12 | 9 |
face | 8.78e-12 | 9 |
optic cup | 8.78e-12 | 9 |
optic vesicle | 8.78e-12 | 9 |
eye primordium | 8.78e-12 | 9 |
structure with developmental contribution from neural crest | 2.81e-10 | 92 |
subdivision of head | 1.11e-09 | 11 |
sense organ | 6.84e-09 | 12 |
sensory system | 6.84e-09 | 12 |
entire sense organ system | 6.84e-09 | 12 |
adrenal gland | 7.09e-09 | 7 |
adrenal/interrenal gland | 7.09e-09 | 7 |
neurectoderm | 9.25e-09 | 64 |
neural plate | 9.25e-09 | 64 |
presumptive neural plate | 9.25e-09 | 64 |
head | 3.19e-08 | 13 |
ectodermal placode | 3.19e-08 | 13 |
corpora quadrigemina | 1.14e-07 | 1 |
midbrain tectum | 1.14e-07 | 1 |
neural tube mantle layer | 1.14e-07 | 1 |
tectal plate | 1.14e-07 | 1 |
neural tube alar plate | 1.14e-07 | 1 |
ecto-epithelium | 1.56e-07 | 73 |
pre-chordal neural plate | 1.68e-07 | 49 |