FFCP PHASE1:Mm9::chr19:18805919..18805930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18805919..18805930,+ | |||
|description=CAGE_peak_at_chr19:18805919..18805930,+ | |description=CAGE_peak_at_chr19:18805919..18805930,+ | ||
|id=chr19:18805919..18805930,+ | |id=chr19:18805919..18805930,+ | ||
|ontology_enrichment_celltype=CL:0000473!1.44e-14!3;CL:0000627!1.44e-14!3;CL:0000682!1.44e-14!3;CL:0000239!1.01e-12!6;CL:0000677!1.01e-12!6;CL:0000212!1.01e-12!6;CL:0000584!1.01e-12!6;CL:0000075!6.34e-11!7;CL:0002563!1.60e-08!9;CL:0002251!1.60e-08!9;CL:0000066!2.13e-08!25 | |ontology_enrichment_celltype=CL:0000473!1.44e-14!3;CL:0000627!1.44e-14!3;CL:0000682!1.44e-14!3;CL:0000239!1.01e-12!6;CL:0000677!1.01e-12!6;CL:0000212!1.01e-12!6;CL:0000584!1.01e-12!6;CL:0000075!6.34e-11!7;CL:0002563!1.60e-08!9;CL:0002251!1.60e-08!9;CL:0000066!2.13e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.74e-29,3;CL:0000239,2.51e-15,6;CL:0000677,2.51e-15,6;CL:0000584,2.51e-15,6;CL:0000066,6.12e-14,25;CL:0000075,3.08e-13,7;CL:0000473,5.45e-13,7;CL:0002563,1.92e-10,9;CL:0002251,1.92e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.29e-19!15;UBERON:0001242!2.36e-12!13;UBERON:0000060!2.36e-12!13;UBERON:0001262!2.36e-12!13;UBERON:0004786!2.36e-12!13;UBERON:0004923!1.93e-11!24;UBERON:0001962!1.19e-10!2;UBERON:0001961!1.19e-10!2;UBERON:0001744!1.19e-10!2;UBERON:0003350!1.60e-08!9;UBERON:0004808!1.60e-08!9;UBERON:0001277!1.60e-08!9;UBERON:0002465!2.27e-07!3;UBERON:0000485!5.50e-07!11;UBERON:0000331!6.86e-07!3;UBERON:0002116!6.86e-07!3;UBERON:0001204!6.86e-07!3;UBERON:0001168!6.86e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.57e-23,15;UBERON:0001962,6.43e-21,2;UBERON:0001961,6.43e-21,2;UBERON:0001744,6.43e-21,2;UBERON:0004923,9.75e-15,24;UBERON:0002465,2.70e-14,3;UBERON:0001242,2.15e-12,13;UBERON:0001262,2.15e-12,13;UBERON:0004786,2.15e-12,13;UBERON:0003199,2.31e-11,1;UBERON:0003350,1.92e-10,9;UBERON:0004808,1.92e-10,9;UBERON:0001277,1.92e-10,9;UBERON:0000485,1.18e-08,11 | |||
|phase1_expression=0,2.44282785347553,8.64498554840118,0,0,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,6.65286915094793,1.72269589234506,1.29228598847722,2.80112602491656,0.190023419456374,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,8.64498554840118,0,0,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,6.65286915094793,1.72269589234506,1.29228598847722,2.80112602491656,0.190023419456374,0,1.99557459589774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr19:18805919..18805930,+ | |short_description=p@chr19:18805919..18805930,+ | ||
}} | }} |
Latest revision as of 09:08, 6 August 2015
Short description: | p@chr19:18805919..18805930, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18805919..18805930, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.74e-29 | 3 |
brush border epithelial cell | 2.51e-15 | 6 |
gut absorptive cell | 2.51e-15 | 6 |
enterocyte | 2.51e-15 | 6 |
epithelial cell | 6.12e-14 | 25 |
columnar/cuboidal epithelial cell | 3.08e-13 | 7 |
defensive cell | 5.45e-13 | 7 |
intestinal epithelial cell | 1.92e-10 | 9 |
epithelial cell of alimentary canal | 1.92e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.57e-23 | 15 |
gut-associated lymphoid tissue | 6.43e-21 | 2 |
mucosa-associated lymphoid tissue | 6.43e-21 | 2 |
lymphoid tissue | 6.43e-21 | 2 |
organ component layer | 9.75e-15 | 24 |
lymphoid system | 2.70e-14 | 3 |
intestinal mucosa | 2.15e-12 | 13 |
wall of intestine | 2.15e-12 | 13 |
gastrointestinal system mucosa | 2.15e-12 | 13 |
egg chamber | 2.31e-11 | 1 |
epithelium of mucosa | 1.92e-10 | 9 |
gastrointestinal system epithelium | 1.92e-10 | 9 |
intestinal epithelium | 1.92e-10 | 9 |
simple columnar epithelium | 1.18e-08 | 11 |