Personal tools

FFCP PHASE1:Mm9::chr19:10708713..10708735,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71768
|EntrezGene=71768
|HGNC=
|HGNC=
|MCL_coexpression_id=1413
|TSSclassifier=NA
|UniProt=Q3U515
|UniProt=Q3U515
|association_with_transcript=0bp_to_ENSMUST00000055115,NM_027913,uc008gqn.2,uc008gqo.2_5end
|association_with_transcript=0bp_to_ENSMUST00000055115,NM_027913,uc008gqn.2,uc008gqo.2_5end
|cluster_id=chr19:10708713..10708735,+
|description=CAGE_peak_1_at_Vwce_5end
|description=CAGE_peak_1_at_Vwce_5end
|id=chr19:10708713..10708735,+
|id=chr19:10708713..10708735,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,2.84e-08,6;CL:0000677,2.84e-08,6;CL:0000584,2.84e-08,6;CL:0000066,1.35e-07,25;CL:0000075,6.24e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!9.43e-14!22;UBERON:0007499!9.43e-14!22;UBERON:0006925!9.43e-14!22;UBERON:0009497!9.43e-14!22;UBERON:0000015!9.43e-14!22;UBERON:0002423!9.43e-14!22;UBERON:0006235!9.43e-14!22;UBERON:0008835!9.43e-14!22;UBERON:0003894!9.43e-14!22;UBERON:0004161!9.43e-14!22;UBERON:0008836!9.43e-14!22;UBERON:0009854!1.23e-12!23;UBERON:0009856!1.23e-12!23;UBERON:0002365!9.64e-12!25;UBERON:0002330!9.64e-12!25;UBERON:0005172!7.34e-11!49;UBERON:0005173!7.34e-11!49;UBERON:0002417!7.34e-11!49;UBERON:0000916!7.34e-11!49;UBERON:0000160!4.31e-10!43;UBERON:0005409!3.41e-09!59;UBERON:0001007!4.32e-09!128;UBERON:0001555!4.32e-09!128;UBERON:0007026!4.32e-09!128;UBERON:0003929!7.02e-09!55;UBERON:0004119!7.13e-09!130;UBERON:0000925!7.13e-09!130;UBERON:0006595!7.13e-09!130;UBERON:0004921!2.07e-08!126;UBERON:0004185!2.07e-08!126;UBERON:0000344!2.14e-08!15;UBERON:0001242!1.67e-07!13;UBERON:0000060!1.67e-07!13;UBERON:0001262!1.67e-07!13;UBERON:0004786!1.67e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.79e-23,22;UBERON:0007499,8.79e-23,22;UBERON:0006925,8.79e-23,22;UBERON:0009497,8.79e-23,22;UBERON:0000015,8.79e-23,22;UBERON:0002423,8.79e-23,22;UBERON:0006235,8.79e-23,22;UBERON:0008835,8.79e-23,22;UBERON:0003894,8.79e-23,22;UBERON:0004161,8.79e-23,22;UBERON:0008836,8.79e-23,22;UBERON:0009854,1.71e-21,23;UBERON:0009856,1.71e-21,23;UBERON:0002365,3.11e-19,25;UBERON:0002330,3.11e-19,25;UBERON:0000160,9.41e-19,31;UBERON:0001007,2.10e-13,116;UBERON:0001555,2.10e-13,116;UBERON:0007026,2.10e-13,116;UBERON:0004119,5.93e-13,118;UBERON:0000925,5.93e-13,118;UBERON:0006595,5.93e-13,118;UBERON:0004921,3.12e-12,114;UBERON:0003929,5.97e-12,55;UBERON:0005172,1.27e-10,49;UBERON:0005173,1.27e-10,49;UBERON:0002417,1.27e-10,49;UBERON:0000916,1.27e-10,49;UBERON:0005409,6.14e-10,47;UBERON:0000344,7.82e-10,15;UBERON:0000490,1.24e-08,66;UBERON:0001242,2.88e-08,13;UBERON:0001262,2.88e-08,13;UBERON:0004786,2.88e-08,13;UBERON:0005911,6.28e-08,69;UBERON:0005256,6.50e-08,45;UBERON:0003914,2.46e-07,47;UBERON:0003104,3.52e-07,61;UBERON:0009142,3.52e-07,61
|phase1_expression=0,3.83872948403297,4.54999239389536,14.8207463540347,18.0322462780685,2.35030980676646,2.80335168714631,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.765389611359628,0,0,1.91990907352088,2.2940928106717,4.59385571292016,3.4460959692726,3.44753972297422,2.09025761402011,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0.142371680799103,0,0,0,0,0.860423876981386,2.719885334831,8.63525106620507,9.74664626171504,4.48026887097336,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0.693941307064543,0.913396434936424,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0.323533699894818,0,0,0,0,0,2.55457055208591,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,8.59088835757875,4.23120906661671,0.213288250535234,0.464473343720877,1.03093969057675,3.63030344322017,0.667134131534611,3.04361001780095,6.64340686162316,3.45867804920423,2.76468729680296,3.38226002469956,4.28920991662064,5.39291645192533,4.53889904736858,5.77509692437665,0.379335801906163,0.342745537829186,0,0.814605311381257,0,0.561086559122548,2.46622494784603,3.24742325555125,3.1399745568275,3.57851775373222,8.00422093135302,2.33583148002532,3.14494392181125,3.82265591054251,5.07150303471257,6.02942899381042,6.87489799809833,7.19240343627027,5.0261920300261,8.23684239564244,20.1275489138296,7.81495990103857,7.17686648163489,7.57736633841335,6.09951205974501,2.8946611281802,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,1.80899805217755,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,6.99554007911642,0,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.686334519619568,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0.304827226619999,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0.682934423016537,1.45864030240976,0.419226325255965,0.367687016900028,0.666740183404846,1.44224540067226,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,0.37456602987953,1.21647789569252,1.26358031702349,0,1.39061191133827,0.964546102318525,1.64834360321323,0.441596760403192,0.685738504770831,1.06485483695602,0.953744759789284,1.30811774969096,0.846984423737976,1.69229215783353,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,1.06771516311757,1.28055827088233,2.45538625901814,1.54936841185966,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0.231867835620421
|phase1_expression=0,3.83872948403297,4.54999239389536,14.8207463540347,18.0322462780685,2.35030980676646,2.80335168714631,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.765389611359628,0,0,1.91990907352088,2.2940928106717,4.59385571292016,3.4460959692726,3.44753972297422,2.09025761402011,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0.142371680799103,0,0,0,0,0.860423876981386,2.719885334831,8.63525106620507,9.74664626171504,4.48026887097336,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0.693941307064543,0.913396434936424,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0.323533699894818,0,0,0,0,0,2.55457055208591,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,8.59088835757875,4.23120906661671,0.213288250535234,0.464473343720877,1.03093969057675,3.63030344322017,0.667134131534611,3.04361001780095,6.64340686162316,3.45867804920423,2.76468729680296,3.38226002469956,4.28920991662064,5.39291645192533,4.53889904736858,5.77509692437665,0.379335801906163,0.342745537829186,0,0.814605311381257,0,0.561086559122548,2.46622494784603,3.24742325555125,3.1399745568275,3.57851775373222,8.00422093135302,2.33583148002532,3.14494392181125,3.82265591054251,5.07150303471257,6.02942899381042,6.87489799809833,7.19240343627027,5.0261920300261,8.23684239564244,20.1275489138296,7.81495990103857,7.17686648163489,7.57736633841335,6.09951205974501,2.8946611281802,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,1.80899805217755,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,6.99554007911642,0,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.686334519619568,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0.304827226619999,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0.682934423016537,1.45864030240976,0.419226325255965,0.367687016900028,0.666740183404846,1.44224540067226,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,0.37456602987953,1.21647789569252,1.26358031702349,0,1.39061191133827,0.964546102318525,1.64834360321323,0.441596760403192,0.685738504770831,1.06485483695602,0.953744759789284,1.30811774969096,0.846984423737976,1.69229215783353,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,1.06771516311757,1.28055827088233,2.45538625901814,1.54936841185966,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0.231867835620421
|short_description=p1@Vwce
|short_description=p1@Vwce
}}
}}

Latest revision as of 20:47, 1 October 2015

Short description:p1@Vwce
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vwce_5end
Coexpression cluster:MCL_coexpression_mm9:1413
Association with transcript: 0bp_to_ENSMUST00000055115, NM_027913, uc008gqn.2, uc008gqo.2_5end
EntrezGene:Vwce
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vwce

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H16.10
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell2.84e-086
gut absorptive cell2.84e-086
enterocyte2.84e-086
epithelial cell1.35e-0725
columnar/cuboidal epithelial cell6.24e-077

Uber anatomy
Ontology termp-valuen
liver8.79e-2322
epithelial sac8.79e-2322
digestive gland8.79e-2322
epithelium of foregut-midgut junction8.79e-2322
anatomical boundary8.79e-2322
hepatobiliary system8.79e-2322
foregut-midgut junction8.79e-2322
hepatic diverticulum8.79e-2322
liver primordium8.79e-2322
septum transversum8.79e-2322
liver bud8.79e-2322
digestive tract diverticulum1.71e-2123
sac1.71e-2123
exocrine gland3.11e-1925
exocrine system3.11e-1925
intestine9.41e-1931
digestive system2.10e-13116
digestive tract2.10e-13116
primitive gut2.10e-13116
endoderm-derived structure5.93e-13118
endoderm5.93e-13118
presumptive endoderm5.93e-13118
subdivision of digestive tract3.12e-12114
gut epithelium5.97e-1255
abdomen element1.27e-1049
abdominal segment element1.27e-1049
abdominal segment of trunk1.27e-1049
abdomen1.27e-1049
gastrointestinal system6.14e-1047
mucosa7.82e-1015
unilaminar epithelium1.24e-0866
intestinal mucosa2.88e-0813
wall of intestine2.88e-0813
gastrointestinal system mucosa2.88e-0813
endo-epithelium6.28e-0869
trunk mesenchyme6.50e-0845
epithelial tube2.46e-0747
mesenchyme3.52e-0761
entire embryonic mesenchyme3.52e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:10708713..10708735,%2B&oldid=4321540"