FFCP PHASE1:Hg19::chr12:47760639..47760654,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47760639..47760654,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr12:47760639..47760654,- | |description=CAGE_peak_at_chr12:47760639..47760654,- | ||
|id=chr12:47760639..47760654,- | |id=chr12:47760639..47760654,- | ||
|ontology_enrichment_celltype=CL:0000080!1.80e-41!6;CL:0000084!9.43e-22!25;CL:0000827!9.43e-22!25;CL:0000625!4.11e-13!11;CL:0000838!2.32e-10!52;CL:0000542!3.69e-10!53;CL:0000051!3.69e-10!53;CL:0000791!3.07e-08!18;CL:0000789!3.07e-08!18;CL:0002420!3.07e-08!18;CL:0002419!3.07e-08!18;CL:0000790!3.07e-08!18;CL:0000988!1.93e-07!182 | |ontology_enrichment_celltype=CL:0000080!1.80e-41!6;CL:0000084!9.43e-22!25;CL:0000827!9.43e-22!25;CL:0000625!4.11e-13!11;CL:0000838!2.32e-10!52;CL:0000542!3.69e-10!53;CL:0000051!3.69e-10!53;CL:0000791!3.07e-08!18;CL:0000789!3.07e-08!18;CL:0002420!3.07e-08!18;CL:0002419!3.07e-08!18;CL:0000790!3.07e-08!18;CL:0000988!1.93e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.33e-12;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.33e-12,25;CL:0000827,1.33e-12,25;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!8.86e-17!1;DOID:0060061!8.86e-17!1;DOID:8691!8.86e-17!1;DOID:0060058!5.26e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.06e-34;1!DOID:0060061;7.06e-34;1!DOID:8691;7.06e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.06e-34,1;DOID:0060061,7.06e-34,1;DOID:8691,7.06e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.16e-25!15;UBERON:0000179!1.16e-25!15;UBERON:0000463!1.16e-25!15;UBERON:0002331!1.17e-14!10;UBERON:0000358!1.17e-14!10;UBERON:0000307!1.17e-14!10;UBERON:0000091!1.17e-14!10;UBERON:0000087!1.17e-14!10;UBERON:0007806!1.17e-14!10;UBERON:0008780!1.17e-14!10;UBERON:0005728!1.17e-14!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.06e-30;10!UBERON:0000178;1.37e-20;15!UBERON:0000179;1.37e-20;15!UBERON:0000463;1.37e-20;15!UBERON:0000478;3.48e-13;24!UBERON:0002390;3.62e-10;32!UBERON:0000922;9.67e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.06e-30,10;UBERON:0000358,2.06e-30,10;UBERON:0000307,2.06e-30,10;UBERON:0000091,2.06e-30,10;UBERON:0000087,2.06e-30,10;UBERON:0007010,2.06e-30,10;UBERON:0007806,2.06e-30,10;UBERON:0008780,2.06e-30,10;UBERON:0005728,2.06e-30,10;UBERON:0000178,1.37e-20,15;UBERON:0000179,1.37e-20,15;UBERON:0000463,1.37e-20,15;UBERON:0000478,3.48e-13,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,1.53583933385302,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,7.53740027573667,12.4262119911492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2526068168933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,1.53583933385302,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,7.53740027573667,12.4262119911492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2526068168933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:47760639..47760654,- | |short_description=p@chr12:47760639..47760654,- | ||
}} | }} |
Latest revision as of 08:46, 24 July 2015
Short description: | p@chr12:47760639..47760654, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47760639..47760654, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.33e-12 | 25 |
pro-T cell | 1.33e-12 | 25 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.06e-30 | 10 |
blastocyst | 2.06e-30 | 10 |
blastula | 2.06e-30 | 10 |
bilaminar disc | 2.06e-30 | 10 |
inner cell mass | 2.06e-30 | 10 |
cleaving embryo | 2.06e-30 | 10 |
connecting stalk | 2.06e-30 | 10 |
inner cell mass derived epiblast | 2.06e-30 | 10 |
extraembryonic mesoderm | 2.06e-30 | 10 |
blood | 1.37e-20 | 15 |
haemolymphatic fluid | 1.37e-20 | 15 |
organism substance | 1.37e-20 | 15 |
extraembryonic structure | 3.48e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.06e-34 | 1 |
cutaneous T cell lymphoma | 7.06e-34 | 1 |
mycosis fungoides | 7.06e-34 | 1 |