FFCP PHASE1:Hg19::chr12:44934561..44934565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:44934561..44934565,- | |||
|coexpression_cluster_id=C2206 | |||
|description=CAGE_peak_at_chr12:44934561..44934565,- | |description=CAGE_peak_at_chr12:44934561..44934565,- | ||
|id=chr12:44934561..44934565,- | |id=chr12:44934561..44934565,- | ||
|ontology_enrichment_celltype=CL:0000791!1.02e-16!18;CL:0000789!1.02e-16!18;CL:0002420!1.02e-16!18;CL:0002419!1.02e-16!18;CL:0000790!1.02e-16!18;CL:0000625!3.05e-14!11;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000838!5.41e-07!52;CL:0000542!9.60e-07!53;CL:0000051!9.60e-07!53 | |ontology_enrichment_celltype=CL:0000791!1.02e-16!18;CL:0000789!1.02e-16!18;CL:0002420!1.02e-16!18;CL:0002419!1.02e-16!18;CL:0000790!1.02e-16!18;CL:0000625!3.05e-14!11;CL:0000084!1.13e-11!25;CL:0000827!1.13e-11!25;CL:0000838!5.41e-07!52;CL:0000542!9.60e-07!53;CL:0000051!9.60e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.52e-28;18!CL:0000789;2.52e-28;18!CL:0002419;2.52e-28;18!CL:0000625;2.78e-24;11!CL:0000084;2.14e-19;25!CL:0000623;3.63e-09;3!CL:0000226;7.64e-09;3!CL:0000842;7.64e-09;3!CL:0000624;4.08e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.95e-29,18;CL:0000789,8.95e-29,18;CL:0002420,8.95e-29,18;CL:0002419,8.95e-29,18;CL:0000790,8.95e-29,18;CL:0000625,1.27e-24,11;CL:0000084,1.04e-19,25;CL:0000827,1.04e-19,25;CL:0000838,7.39e-12,52;CL:0000542,1.49e-11,53;CL:0000051,1.49e-11,53;CL:0000623,4.63e-09,3;CL:0000825,4.63e-09,3;CL:0000226,1.01e-08,3;CL:0000842,1.01e-08,3;CL:0000624,2.97e-08,6;CL:0002087,4.10e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;2.52e-28;18 | |||
|ontology_enrichment_disease=DOID:171!3.04e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.09e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.35e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.20e-34!57;UBERON:0005068!9.20e-34!57;UBERON:0006241!9.20e-34!57;UBERON:0007135!9.20e-34!57;UBERON:0001017!1.69e-31!82;UBERON:0000073!3.06e-31!94;UBERON:0001016!3.06e-31!94;UBERON:0005743!1.74e-30!86;UBERON:0007023!1.00e-29!115;UBERON:0002780!3.64e-29!41;UBERON:0001890!3.64e-29!41;UBERON:0006240!3.64e-29!41;UBERON:0002616!4.04e-29!59;UBERON:0000955!2.54e-28!69;UBERON:0006238!2.54e-28!69;UBERON:0003080!3.47e-28!42;UBERON:0002346!1.26e-26!90;UBERON:0002020!1.75e-26!34;UBERON:0003528!1.75e-26!34;UBERON:0001869!1.95e-25!32;UBERON:0001893!4.30e-25!34;UBERON:0002791!4.50e-24!33;UBERON:0003075!2.27e-23!86;UBERON:0007284!2.27e-23!86;UBERON:0002619!7.32e-23!22;UBERON:0000956!4.29e-21!25;UBERON:0000203!4.29e-21!25;UBERON:0001950!1.79e-20!20;UBERON:0003056!5.58e-19!61;UBERON:0000153!8.93e-17!129;UBERON:0007811!8.93e-17!129;UBERON:0000924!2.72e-16!173;UBERON:0006601!2.72e-16!173;UBERON:0000033!3.15e-15!123;UBERON:0004121!4.13e-14!169;UBERON:0001871!1.74e-08!7;UBERON:0000200!2.30e-08!6;UBERON:0002420!7.47e-08!9;UBERON:0007245!7.47e-08!9;UBERON:0010009!7.47e-08!9;UBERON:0010011!7.47e-08!9;UBERON:0000454!7.47e-08!9;UBERON:0000349!1.66e-07!5;UBERON:0001872!3.05e-07!5;UBERON:0003076!5.34e-07!15;UBERON:0003057!5.34e-07!15;UBERON:0002308!7.17e-07!9;UBERON:0000125!7.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.76e-37;22!UBERON:0000956;1.42e-32;25!UBERON:0000203;1.42e-32;25!UBERON:0001950;1.91e-32;20!UBERON:0001869;6.86e-27;32!UBERON:0002791;1.32e-24;32!UBERON:0001893;1.96e-23;34!UBERON:0003528;1.91e-22;34!UBERON:0002020;1.91e-22;34!UBERON:0002780;1.89e-18;41!UBERON:0001890;1.89e-18;41!UBERON:0000349;1.23e-14;5!UBERON:0000073;7.08e-14;53!UBERON:0002616;7.08e-14;53!UBERON:0000200;6.37e-12;6!UBERON:0001871;1.13e-10;6!UBERON:0001017;1.09e-09;75!UBERON:0001872;1.33e-09;5!UBERON:0001870;1.54e-09;3!UBERON:0000955;2.19e-09;68!UBERON:0001016;2.75e-08;83!UBERON:0002346;3.82e-07;4!UBERON:0000923;3.82e-07;4!UBERON:0010316;3.82e-07;4!UBERON:0005291;3.82e-07;4!UBERON:0001876;4.29e-07;2!UBERON:0002702;5.13e-07;2!UBERON:0001954;5.95e-07;2!UBERON:0003022;5.95e-07;2!UBERON:0002421;5.95e-07;2!UBERON:0002600;5.95e-07;2!UBERON:0002771;9.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.49e-37,22;UBERON:0000956,1.23e-32,25;UBERON:0000203,1.23e-32,25;UBERON:0001950,1.59e-32,20;UBERON:0001869,1.92e-30,32;UBERON:0001893,2.20e-28,34;UBERON:0002791,1.90e-27,32;UBERON:0003528,1.40e-25,34;UBERON:0002020,1.40e-25,34;UBERON:0002780,3.75e-25,41;UBERON:0001890,3.75e-25,41;UBERON:0003080,3.75e-25,41;UBERON:0006240,3.75e-25,41;UBERON:0000073,2.36e-22,53;UBERON:0002616,2.36e-22,53;UBERON:0000955,3.47e-21,68;UBERON:0006238,3.47e-21,68;UBERON:0001049,7.57e-21,56;UBERON:0005068,7.57e-21,56;UBERON:0006241,7.57e-21,56;UBERON:0007135,7.57e-21,56;UBERON:0001016,2.52e-17,89;UBERON:0001017,9.02e-17,81;UBERON:0002346,1.52e-15,86;UBERON:0003056,3.25e-15,61;UBERON:0000349,1.40e-14,5;UBERON:0003075,2.03e-12,82;UBERON:0007284,2.03e-12,82;UBERON:0000200,5.00e-12,6;UBERON:0001871,8.50e-11,6;UBERON:0001872,1.20e-09,5;UBERON:0001870,1.81e-09,3;UBERON:0004121,1.06e-08,171;UBERON:0000924,1.06e-08,171;UBERON:0006601,1.06e-08,171;UBERON:0010371,1.24e-08,104;UBERON:0007023,4.27e-08,114;UBERON:0001876,3.93e-07,2;UBERON:0002702,5.14e-07,2;UBERON:0001954,6.14e-07,2;UBERON:0003022,6.14e-07,2;UBERON:0002421,6.14e-07,2;UBERON:0002600,6.14e-07,2;UBERON:0002771,6.70e-07,2;UBERON:0011216,9.94e-07,223 | |||
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|short_description=p@chr12:44934561..44934565,- | |short_description=p@chr12:44934561..44934565,- | ||
}} | }} |
Latest revision as of 08:32, 24 July 2015
Short description: | p@chr12:44934561..44934565, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:44934561..44934565, - |
Coexpression cluster: | C2206_parietal_CD8_occipital_temporal_neuroectodermal_duodenum_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.95e-29 | 18 |
alpha-beta T cell | 8.95e-29 | 18 |
immature T cell | 8.95e-29 | 18 |
mature T cell | 8.95e-29 | 18 |
immature alpha-beta T cell | 8.95e-29 | 18 |
CD8-positive, alpha-beta T cell | 1.27e-24 | 11 |
T cell | 1.04e-19 | 25 |
pro-T cell | 1.04e-19 | 25 |
lymphoid lineage restricted progenitor cell | 7.39e-12 | 52 |
lymphocyte | 1.49e-11 | 53 |
common lymphoid progenitor | 1.49e-11 | 53 |
natural killer cell | 4.63e-09 | 3 |
pro-NK cell | 4.63e-09 | 3 |
single nucleate cell | 1.01e-08 | 3 |
mononuclear cell | 1.01e-08 | 3 |
CD4-positive, alpha-beta T cell | 2.97e-08 | 6 |
nongranular leukocyte | 4.10e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.35e-07 | 10 |