FFCP PHASE1:Hg19::chr12:40549984..40549996,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000457989_5end | |association_with_transcript=-44bp_to_ENST00000457989_5end | ||
|cluster_id=chr12:40549984..40549996,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_ENST00000457989_5end | |description=CAGE_peak_1_at_ENST00000457989_5end | ||
|id=chr12:40549984..40549996,+ | |id=chr12:40549984..40549996,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.16e-21;1!UBERON:0003918;5.80e-09;10!UBERON:0007687;5.80e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.13e-27!115;UBERON:0001049!1.14e-20!57;UBERON:0005068!1.14e-20!57;UBERON:0006241!1.14e-20!57;UBERON:0007135!1.14e-20!57;UBERON:0002780!4.46e-20!41;UBERON:0001890!4.46e-20!41;UBERON:0006240!4.46e-20!41;UBERON:0002616!8.62e-20!59;UBERON:0003080!1.67e-19!42;UBERON:0000955!7.45e-16!69;UBERON:0006238!7.45e-16!69;UBERON:0001869!2.27e-15!32;UBERON:0001017!2.54e-15!82;UBERON:0003075!1.38e-14!86;UBERON:0007284!1.38e-14!86;UBERON:0005743!2.36e-14!86;UBERON:0001893!2.64e-14!34;UBERON:0002020!2.86e-14!34;UBERON:0003528!2.86e-14!34;UBERON:0002346!1.10e-13!90;UBERON:0000200!4.00e-13!6;UBERON:0000153!5.59e-13!129;UBERON:0007811!5.59e-13!129;UBERON:0001950!6.04e-13!20;UBERON:0002791!1.07e-12!33;UBERON:0000073!1.80e-12!94;UBERON:0001016!1.80e-12!94;UBERON:0003056!3.73e-12!61;UBERON:0002619!1.20e-11!22;UBERON:0000033!1.83e-10!123;UBERON:0000956!4.49e-10!25;UBERON:0000203!4.49e-10!25;UBERON:0004121!3.95e-08!169;UBERON:0000007!4.26e-08!2;UBERON:0001894!6.18e-08!7;UBERON:0006222!6.18e-08!7;UBERON:0000369!7.07e-08!4;UBERON:0002435!7.07e-08!4;UBERON:0000204!7.07e-08!4;UBERON:0010082!7.07e-08!4;UBERON:0000924!8.52e-08!173;UBERON:0006601!8.52e-08!173;UBERON:0000341!9.24e-08!2;UBERON:0001897!1.72e-07!2;UBERON:0001870!2.09e-07!2;UBERON:0002360!6.95e-07!2;UBERON:0000094!6.95e-07!2;UBERON:0007645!6.95e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.16e-21;1!UBERON:0006518;5.16e-21;1!UBERON:0008949;5.16e-21;1!UBERON:0000101;5.16e-21;1!UBERON:0002167;5.16e-21;1!UBERON:0000341;2.12e-11;2!UBERON:0000007;3.34e-11;2!UBERON:0002702;3.34e-11;2!UBERON:0001043;6.78e-08;3!UBERON:0001870;6.78e-08;3!UBERON:0001723;6.78e-08;3!UBERON:0001033;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.16e-21,1;UBERON:0006518,5.16e-21,1;UBERON:0008949,5.16e-21,1;UBERON:0000101,5.16e-21,1;UBERON:0002167,5.16e-21,1;UBERON:0000341,2.02e-11,2;UBERON:0002702,2.47e-11,2;UBERON:0000007,3.70e-11,2;UBERON:0007023,2.49e-08,114;UBERON:0001870,5.54e-08,3;UBERON:0001043,5.93e-08,3;UBERON:0009143,5.93e-08,3;UBERON:0001723,8.29e-08,3;UBERON:0001033,8.29e-08,3;UBERON:0010056,8.29e-08,3 | |||
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| ||
|short_description=p1@ENST00000457989 | |short_description=p1@ENST00000457989 | ||
}} | }} |
Latest revision as of 08:21, 24 July 2015
Short description: | p1@ENST00000457989 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000457989_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -44bp_to_ENST00000457989_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.16e-21 | 1 |
right lung lobe | 5.16e-21 | 1 |
lower lobe of lung | 5.16e-21 | 1 |
lobe of lung | 5.16e-21 | 1 |
right lung | 5.16e-21 | 1 |
throat | 2.02e-11 | 2 |
middle frontal gyrus | 2.47e-11 | 2 |
pituitary gland | 3.70e-11 | 2 |
adult organism | 2.49e-08 | 114 |
frontal cortex | 5.54e-08 | 3 |
esophagus | 5.93e-08 | 3 |
esophageal region | 5.93e-08 | 3 |
tongue | 8.29e-08 | 3 |
gustatory system | 8.29e-08 | 3 |
future tongue | 8.29e-08 | 3 |