FFCP PHASE1:Hg19::chr12:32259696..32259794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=636 | |EntrezGene=636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |HGNC=1049 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000551848_5end | |association_with_transcript=0bp_to_ENST00000551848_5end | ||
|cluster_id=chr12:32259696..32259794,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_1_at_BICD1_5end | |description=CAGE_peak_1_at_BICD1_5end | ||
|id=chr12:32259696..32259794,+ | |id=chr12:32259696..32259794,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.16e-09!235;DOID:14566!1.19e-08!239;DOID:193!5.97e-08!29;DOID:0050687!6.98e-08!143;DOID:120!5.30e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:193;4.12e-08;29!DOID:120;3.76e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.05e-09,235;DOID:14566,1.17e-08,239;DOID:193,5.97e-08,29;DOID:0050687,6.98e-08,143;DOID:120,5.30e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.31e-24!82;UBERON:0005743!4.57e-23!86;UBERON:0000073!5.85e-23!94;UBERON:0001016!5.85e-23!94;UBERON:0000955!2.05e-18!69;UBERON:0006238!2.05e-18!69;UBERON:0001049!1.61e-16!57;UBERON:0005068!1.61e-16!57;UBERON:0006241!1.61e-16!57;UBERON:0007135!1.61e-16!57;UBERON:0002616!2.30e-15!59;UBERON:0003075!4.22e-15!86;UBERON:0007284!4.22e-15!86;UBERON:0002346!8.88e-15!90;UBERON:0002780!2.54e-14!41;UBERON:0001890!2.54e-14!41;UBERON:0006240!2.54e-14!41;UBERON:0003080!3.10e-14!42;UBERON:0001893!4.56e-13!34;UBERON:0002020!8.83e-13!34;UBERON:0003528!8.83e-13!34;UBERON:0003056!1.03e-12!61;UBERON:0002791!1.30e-12!33;UBERON:0001869!1.42e-12!32;UBERON:0000956!2.68e-11!25;UBERON:0000203!2.68e-11!25;UBERON:0004121!3.09e-11!169;UBERON:0000924!3.35e-11!173;UBERON:0006601!3.35e-11!173;UBERON:0000033!7.42e-11!123;UBERON:0000153!7.61e-11!129;UBERON:0007811!7.61e-11!129;UBERON:0002619!1.45e-09!22;UBERON:0001950!7.29e-09!20;UBERON:0000025!3.81e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.52e-11;32!UBERON:0001893;1.76e-11;34!UBERON:0002791;2.53e-11;32!UBERON:0000956;2.88e-11;25!UBERON:0000203;2.88e-11;25!UBERON:0003528;3.85e-11;34!UBERON:0002020;3.85e-11;34!UBERON:0002780;8.88e-11;41!UBERON:0001890;8.88e-11;41!UBERON:0000073;1.56e-09;53!UBERON:0002616;1.56e-09;53!UBERON:0002619;1.58e-09;22!UBERON:0001017;2.48e-09;75!UBERON:0001950;8.41e-09;20!UBERON:0000955;9.84e-09;68!UBERON:0001016;1.36e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.73e-24,81;UBERON:0001016,8.03e-24,89;UBERON:0000955,1.87e-18,68;UBERON:0006238,1.87e-18,68;UBERON:0001049,1.41e-16,56;UBERON:0005068,1.41e-16,56;UBERON:0006241,1.41e-16,56;UBERON:0007135,1.41e-16,56;UBERON:0003075,2.01e-15,82;UBERON:0007284,2.01e-15,82;UBERON:0000073,2.05e-15,53;UBERON:0002616,2.05e-15,53;UBERON:0002346,4.57e-15,86;UBERON:0002780,2.54e-14,41;UBERON:0001890,2.54e-14,41;UBERON:0003080,2.54e-14,41;UBERON:0006240,2.54e-14,41;UBERON:0003056,4.09e-13,61;UBERON:0001893,4.56e-13,34;UBERON:0003528,8.83e-13,34;UBERON:0002020,8.83e-13,34;UBERON:0001869,1.42e-12,32;UBERON:0002791,2.89e-12,32;UBERON:0000956,2.68e-11,25;UBERON:0000203,2.68e-11,25;UBERON:0004121,9.51e-11,171;UBERON:0000924,9.51e-11,171;UBERON:0006601,9.51e-11,171;UBERON:0010314,1.91e-10,132;UBERON:0010371,1.25e-09,104;UBERON:0002619,1.45e-09,22;UBERON:0001950,7.29e-09,20;UBERON:0011216,1.06e-08,223;UBERON:0000025,4.74e-07,192 | |||
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| ||
|short_description=p1@BICD1 | |short_description=p1@BICD1 | ||
}} | }} |
Latest revision as of 04:34, 18 September 2015
Short description: | p1@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BICD1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000551848_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.73e-24 | 81 |
nervous system | 8.03e-24 | 89 |
brain | 1.87e-18 | 68 |
future brain | 1.87e-18 | 68 |
neural tube | 1.41e-16 | 56 |
neural rod | 1.41e-16 | 56 |
future spinal cord | 1.41e-16 | 56 |
neural keel | 1.41e-16 | 56 |
neural plate | 2.01e-15 | 82 |
presumptive neural plate | 2.01e-15 | 82 |
regional part of nervous system | 2.05e-15 | 53 |
regional part of brain | 2.05e-15 | 53 |
neurectoderm | 4.57e-15 | 86 |
regional part of forebrain | 2.54e-14 | 41 |
forebrain | 2.54e-14 | 41 |
anterior neural tube | 2.54e-14 | 41 |
future forebrain | 2.54e-14 | 41 |
pre-chordal neural plate | 4.09e-13 | 61 |
telencephalon | 4.56e-13 | 34 |
brain grey matter | 8.83e-13 | 34 |
gray matter | 8.83e-13 | 34 |
cerebral hemisphere | 1.42e-12 | 32 |
regional part of telencephalon | 2.89e-12 | 32 |
cerebral cortex | 2.68e-11 | 25 |
pallium | 2.68e-11 | 25 |
ectoderm-derived structure | 9.51e-11 | 171 |
ectoderm | 9.51e-11 | 171 |
presumptive ectoderm | 9.51e-11 | 171 |
structure with developmental contribution from neural crest | 1.91e-10 | 132 |
ecto-epithelium | 1.25e-09 | 104 |
regional part of cerebral cortex | 1.45e-09 | 22 |
neocortex | 7.29e-09 | 20 |
organ system subdivision | 1.06e-08 | 223 |
tube | 4.74e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.05e-09 | 235 |
disease of cellular proliferation | 1.17e-08 | 239 |
reproductive organ cancer | 5.97e-08 | 29 |
cell type cancer | 6.98e-08 | 143 |
female reproductive organ cancer | 5.30e-07 | 27 |