FFCP PHASE1:Hg19::chr12:31135429..31135469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:31135429..31135469,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr12:31135429..31135469,+ | |description=CAGE_peak_at_chr12:31135429..31135469,+ | ||
|id=chr12:31135429..31135469,+ | |id=chr12:31135429..31135469,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.56e-36!24;CL:0000826!2.56e-36!24;CL:0000946!1.30e-19!1;CL:0000786!1.30e-19!1;CL:0000980!1.30e-19!1;CL:0000838!1.14e-16!52;CL:0000542!2.39e-16!53;CL:0000051!2.39e-16!53;CL:0000785!1.72e-10!2;CL:0000955!1.72e-10!2;CL:0000818!1.72e-10!2;CL:0000954!1.72e-10!2;CL:0000816!1.72e-10!2;CL:0000817!2.05e-07!3;CL:0002144!2.63e-07!3;CL:0002087!5.07e-07!119 | |ontology_enrichment_celltype=CL:0000945!2.56e-36!24;CL:0000826!2.56e-36!24;CL:0000946!1.30e-19!1;CL:0000786!1.30e-19!1;CL:0000980!1.30e-19!1;CL:0000838!1.14e-16!52;CL:0000542!2.39e-16!53;CL:0000051!2.39e-16!53;CL:0000785!1.72e-10!2;CL:0000955!1.72e-10!2;CL:0000818!1.72e-10!2;CL:0000954!1.72e-10!2;CL:0000816!1.72e-10!2;CL:0000817!2.05e-07!3;CL:0002144!2.63e-07!3;CL:0002087!5.07e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.48e-40;1!CL:0000786;1.48e-40;1!CL:0000945;6.78e-27;24!CL:0000542;5.09e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.48e-40,1;CL:0000786,1.48e-40,1;CL:0000980,1.48e-40,1;CL:0000945,6.78e-27,24;CL:0000826,6.78e-27,24;CL:0000785,4.66e-21,2;CL:0000955,4.66e-21,2;CL:0000818,4.66e-21,2;CL:0000954,4.66e-21,2;CL:0000816,4.66e-21,2;CL:0000817,1.60e-14,3;CL:0000838,7.71e-13,52;CL:0000542,1.31e-12,53;CL:0000051,1.31e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000954;4.66e-21;2!UBERON:0004872;5.08e-07;7!CL:0000051;5.09e-07;53 | |||
|ontology_enrichment_disease=DOID:630!1.56e-19!1;DOID:0050177!1.56e-19!1;DOID:0050427!1.56e-19!1;DOID:0060058!6.19e-17!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.70e-40;1!DOID:0050177;2.70e-40;1!DOID:0050427;2.70e-40;1!DOID:0060058;7.21e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.21e-40,1;DOID:0050177,2.21e-40,1;DOID:0050427,2.21e-40,1;DOID:0060058,7.51e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.82e-07!3;UBERON:0004854!1.82e-07!3;UBERON:0009034!1.82e-07!3;UBERON:0002095!1.82e-07!3;UBERON:0004782!1.82e-07!3;UBERON:0003281!1.82e-07!3;UBERON:0009664!1.82e-07!3;UBERON:0002296!1.82e-07!3;UBERON:0005602!1.82e-07!3;UBERON:0001179!1.82e-07!3;UBERON:0006293!1.82e-07!3;UBERON:0001915!2.63e-07!3;UBERON:0001982!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5699717133405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80272158934072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.2786396007492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5699717133405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80272158934072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.2786396007492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p@chr12:31135429..31135469,+ | |short_description=p@chr12:31135429..31135469,+ | ||
}} | }} |
Latest revision as of 08:05, 24 July 2015
Short description: | p@chr12:31135429..31135469, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31135429..31135469, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.48e-40 | 1 |
plasma cell | 1.48e-40 | 1 |
plasmablast | 1.48e-40 | 1 |
lymphocyte of B lineage | 6.78e-27 | 24 |
pro-B cell | 6.78e-27 | 24 |
mature B cell | 4.66e-21 | 2 |
pre-B-II cell | 4.66e-21 | 2 |
transitional stage B cell | 4.66e-21 | 2 |
small pre-B-II cell | 4.66e-21 | 2 |
immature B cell | 4.66e-21 | 2 |
precursor B cell | 1.60e-14 | 3 |
lymphoid lineage restricted progenitor cell | 7.71e-13 | 52 |
lymphocyte | 1.31e-12 | 53 |
common lymphoid progenitor | 1.31e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.21e-40 | 1 |
monogenic disease | 2.21e-40 | 1 |
xeroderma pigmentosum | 2.21e-40 | 1 |
lymphoma | 7.51e-17 | 10 |