FFCP PHASE1:Hg19::chr12:13720089..13720098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13720089..13720098,- | |||
|coexpression_cluster_id=C2172 | |||
|description=CAGE_peak_at_chr12:13720089..13720098,- | |description=CAGE_peak_at_chr12:13720089..13720098,- | ||
|id=chr12:13720089..13720098,- | |id=chr12:13720089..13720098,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr12:13720089..13720098,- | |short_description=p@chr12:13720089..13720098,- | ||
}} | }} |
Latest revision as of 07:01, 24 July 2015
Short description: | p@chr12:13720089..13720098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13720089..13720098, - |
Coexpression cluster: | C2172_amygdala_hippocampus_medial_cerebellum_parietal_insula_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
limbic system | 1.44e-32 | 5 |
regional part of cerebral cortex | 4.07e-28 | 22 |
cerebral cortex | 5.65e-25 | 25 |
pallium | 5.65e-25 | 25 |
temporal lobe | 1.14e-23 | 6 |
middle temporal gyrus | 3.11e-21 | 2 |
Ammon's horn | 3.81e-21 | 2 |
lobe parts of cerebral cortex | 3.81e-21 | 2 |
hippocampal formation | 3.81e-21 | 2 |
limbic lobe | 3.81e-21 | 2 |
amygdala | 4.66e-21 | 2 |
regional part of telencephalon | 7.42e-20 | 32 |
cerebral hemisphere | 7.42e-20 | 32 |
brain grey matter | 9.09e-19 | 34 |
gray matter | 9.09e-19 | 34 |
telencephalon | 9.09e-19 | 34 |
neocortex | 9.30e-18 | 20 |
regional part of forebrain | 9.03e-16 | 41 |
forebrain | 9.03e-16 | 41 |
anterior neural tube | 9.03e-16 | 41 |
future forebrain | 9.03e-16 | 41 |
regional part of nervous system | 1.98e-12 | 53 |
regional part of brain | 1.98e-12 | 53 |
neural tube | 8.22e-12 | 56 |
neural rod | 8.22e-12 | 56 |
future spinal cord | 8.22e-12 | 56 |
neural keel | 8.22e-12 | 56 |
pre-chordal neural plate | 6.50e-11 | 61 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
occipital lobe | 3.49e-09 | 5 |
central nervous system | 2.59e-08 | 81 |
neural plate | 2.59e-08 | 82 |
presumptive neural plate | 2.59e-08 | 82 |
gyrus | 5.54e-08 | 6 |
neurectoderm | 5.87e-08 | 86 |
nervous system | 1.48e-07 | 89 |