FFCP PHASE1:Mm9::chr2:109757753..109757795,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107515 | |EntrezGene=107515 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2ARI4,A2ARI3,Q8BZR7 | |UniProt=A2ARI4,A2ARI3,Q8BZR7 | ||
|association_with_transcript=-8bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end | |association_with_transcript=-8bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end | ||
|cluster_id=chr2:109757753..109757795,+ | |||
|description=CAGE_peak_1_at_Lgr4_5end | |description=CAGE_peak_1_at_Lgr4_5end | ||
|id=chr2:109757753..109757795,+ | |id=chr2:109757753..109757795,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.86e-07!9;CL:0002251!8.86e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.47e-07,9;CL:0002251,8.47e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.91e-10!43;UBERON:0000344!6.66e-09!15;UBERON:0005409!1.21e-08!59;UBERON:0001242!2.91e-08!13;UBERON:0000060!2.91e-08!13;UBERON:0001262!2.91e-08!13;UBERON:0004786!2.91e-08!13;UBERON:0003350!8.86e-07!9;UBERON:0004808!8.86e-07!9;UBERON:0001277!8.86e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-12,31;UBERON:0005409,1.57e-09,47;UBERON:0000344,6.26e-09,15;UBERON:0001242,2.75e-08,13;UBERON:0001262,2.75e-08,13;UBERON:0004786,2.75e-08,13;UBERON:0003350,8.47e-07,9;UBERON:0004808,8.47e-07,9;UBERON:0001277,8.47e-07,9 | |||
|phase1_expression=10.4096750618116,22.6834014965585,17.2899710968024,32.6661348211376,32.5582224465126,24.342494427224,22.8940387783615,0,0,0.234064526321993,0.171217968225505,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,4.5072943780067,0,0.261199789138935,12.1594241322989,12.3881011776272,16.0784949952206,21.5380998079537,13.7901588918969,27.7434192406306,30.4956457009516,13.9690221712842,5.08024538767705,3.07532393792285,0,18.7753552838328,16.1247605997738,17.7627339948261,0,0,0,0,0.683045484958446,0,1.38486499773135,1.92616169317078,2.38610777810186,3.12956537739216,1.74420125104357,3.29529274101708,4.08302788055995,5.17949760013841,2.87505128729943,0,0,0,2.05807548828758,4.01146815914259,1.54701627683233,5.26022798234954,3.70293685490423,5.07065122804943,1.69422266034566,6.22506357277798,0,0,0,2.39680088414724,4.61061966385865,0.311068836925433,0.405017814995072,0.420649922702764,7.42692559449889,2.65042249141936,0.979926393719632,0.862609239164127,0,4.40463523997555,5.61824287574826,4.30098293117482,4.74790635828698,4.48289453651807,6.25096044668112,6.97957497503452,5.6276261003168,4.27835093775068,5.30331453852602,5.26775218956681,6.33758115806022,1.81742863999642,3.55186332501892,1.15945795480671,4.30211938490693,2.719885334831,5.93673510801599,9.74664626171504,13.8888335000174,6.88177658645584,12.2709832256202,5.97507810586598,9.89350808628953,7.60554466794075,14.115912515575,38.2207859559969,63.9960032837998,2.59789249213457,1.26679932737549,1.51657333504435,9.24889425724386,0,12.1722554033156,7.11289839741157,3.65358573974569,9.68585088475446,7.83757730873637,11.6412820064348,16.5879900555172,10.6293836125781,2.31358971071859,0,8.08834249737046,3.5334642953663,5.81850303762267,5.59175283654366,13.4679166625312,11.9384622883669,14.0501380364725,0,0.599902730993408,0.635351135365324,7.63932260964596,5.49000723382352,2.63874139437015,7.47444576826789,7.41574826257959,6.85700547046548,6.32740925964255,7.02691610567182,4.97627882440372,7.32895999457657,8.62811609134543,9.49879233627737,9.42598628177239,8.82304436046211,11.7549757911858,17.9616357759506,20.8825364064305,23.5191328644919,10.0894314588216,3.66465587985832,8.32066752738405,15.4836989264275,10.9597866213787,11.6779844674751,14.626590993931,11.9353639116607,13.5343301436575,0,0.51469581422943,0,2.07125772535502,1.87620847984877,2.88099298337624,3.55117103377815,3.14822770795846,3.39387648352232,3.48800917125612,3.48755421819505,4.90414437942112,4.77223564749093,2.46251196118643,2.26992666728396,3.36259971078264,1.97595103761946,2.68412837520744,8.62188789112922,4.93942139420565,7.93005079161115,16.3959351331397,7.67837701926842,9.98617688999886,17.3971072784826,12.3026950020239,11.3412802360884,11.6037631928661,13.7613427847908,12.0230236948528,10.8074139784116,8.75408476981064,9.94316844307513,13.4822911298133,10.8069024937347,11.1519113022446,7.01771233526402,10.967857210534,16.9061603509621,13.4409876377907,13.5766741017338,25.529438440076,18.1488861546618,16.3847264257358,18.2118524295995,27.1473760627961,5.63259991465583,3.17005700860579,3.34150291692445,2.02375901146368,3.44862206360455,3.37648023653384,2.29163266603278,4.89083433666378,3.89124544260085,2.74561413188081,7.18841032636773,8.55924179637558,5.30464044294753,6.56705082662491,9.32866550313943,10.1313139486307,0.923765950833023,1.13694847062291,2.11854469374634,0.848725428875941,1.17345124144251,1.00503754465089,1.42826184531608,1.17080188714679,1.57635144106191,1.99318220683897,2.39182152986231,0.491589944147214,0.690739927463582,0.867894351489069,0,0,14.7529281905711,31.1808523324348,4.81651769963376,6.21221938938677,5.24591825205361,3.7870639080656,5.04813151066011,6.24701990874622,11.2020166821055,2.62865677747807,2.00518806674155,2.83076530788832,5.66734982344852,5.84511715822624,5.13874111330481,22.4924921495265,8.23252494207958,6.58842733568844,12.0536349921646,9.07335676348945,3.98235415019888,3.8844901784797,5.13950046840077,6.41257271170054,5.02013217897314,5.22639751504677,9.8202751403924,7.99774204850512,8.91243445961803,6.63677191665214,9.48767477174989,7.21948802737308,10.5536277783674,13.6846431463796,10.7367707539686,11.1455258216428,12.4138163549592,14.2695054081656,15.7967059778036,8.82948352432338,2.58138878870081,5.2958017715955,4.19003956304428,12.5313552235525,15.5005849628069,14.4751019827574,12.4147237763262,9.84845398470368,12.5336759750836,8.34413859047294,0.170870880797853,4.95328483111734,2.59272338317596,0.188368457004691,0.27338845544205,0,0.509935289981566,0.839708713941948,0.829199842826543,10.5013767981662,7.27572785236611,6.30290348093231,11.1245501046455,14.2180041289839,9.17122767733946,9.84509728609191,8.84391976261094,14.6583327511057,8.81381818384192,3.10669656543463,0.56369293868419,23.0255480907727,25.480607530393,24.306398543006,18.8573342277487,18.9230860549672,21.1243029562357,6.2498104725096,4.50895181030557,1.69108884578204,3.74439008135225,0.948033361884535,3.04087822935246,3.80030541509861,2.85825810551149,3.75956060901711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| |phase1_expression=10.4096750618116,22.6834014965585,17.2899710968024,32.6661348211376,32.5582224465126,24.342494427224,22.8940387783615,0,0,0.234064526321993,0.171217968225505,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,4.5072943780067,0,0.261199789138935,12.1594241322989,12.3881011776272,16.0784949952206,21.5380998079537,13.7901588918969,27.7434192406306,30.4956457009516,13.9690221712842,5.08024538767705,3.07532393792285,0,18.7753552838328,16.1247605997738,17.7627339948261,0,0,0,0,0.683045484958446,0,1.38486499773135,1.92616169317078,2.38610777810186,3.12956537739216,1.74420125104357,3.29529274101708,4.08302788055995,5.17949760013841,2.87505128729943,0,0,0,2.05807548828758,4.01146815914259,1.54701627683233,5.26022798234954,3.70293685490423,5.07065122804943,1.69422266034566,6.22506357277798,0,0,0,2.39680088414724,4.61061966385865,0.311068836925433,0.405017814995072,0.420649922702764,7.42692559449889,2.65042249141936,0.979926393719632,0.862609239164127,0,4.40463523997555,5.61824287574826,4.30098293117482,4.74790635828698,4.48289453651807,6.25096044668112,6.97957497503452,5.6276261003168,4.27835093775068,5.30331453852602,5.26775218956681,6.33758115806022,1.81742863999642,3.55186332501892,1.15945795480671,4.30211938490693,2.719885334831,5.93673510801599,9.74664626171504,13.8888335000174,6.88177658645584,12.2709832256202,5.97507810586598,9.89350808628953,7.60554466794075,14.115912515575,38.2207859559969,63.9960032837998,2.59789249213457,1.26679932737549,1.51657333504435,9.24889425724386,0,12.1722554033156,7.11289839741157,3.65358573974569,9.68585088475446,7.83757730873637,11.6412820064348,16.5879900555172,10.6293836125781,2.31358971071859,0,8.08834249737046,3.5334642953663,5.81850303762267,5.59175283654366,13.4679166625312,11.9384622883669,14.0501380364725,0,0.599902730993408,0.635351135365324,7.63932260964596,5.49000723382352,2.63874139437015,7.47444576826789,7.41574826257959,6.85700547046548,6.32740925964255,7.02691610567182,4.97627882440372,7.32895999457657,8.62811609134543,9.49879233627737,9.42598628177239,8.82304436046211,11.7549757911858,17.9616357759506,20.8825364064305,23.5191328644919,10.0894314588216,3.66465587985832,8.32066752738405,15.4836989264275,10.9597866213787,11.6779844674751,14.626590993931,11.9353639116607,13.5343301436575,0,0.51469581422943,0,2.07125772535502,1.87620847984877,2.88099298337624,3.55117103377815,3.14822770795846,3.39387648352232,3.48800917125612,3.48755421819505,4.90414437942112,4.77223564749093,2.46251196118643,2.26992666728396,3.36259971078264,1.97595103761946,2.68412837520744,8.62188789112922,4.93942139420565,7.93005079161115,16.3959351331397,7.67837701926842,9.98617688999886,17.3971072784826,12.3026950020239,11.3412802360884,11.6037631928661,13.7613427847908,12.0230236948528,10.8074139784116,8.75408476981064,9.94316844307513,13.4822911298133,10.8069024937347,11.1519113022446,7.01771233526402,10.967857210534,16.9061603509621,13.4409876377907,13.5766741017338,25.529438440076,18.1488861546618,16.3847264257358,18.2118524295995,27.1473760627961,5.63259991465583,3.17005700860579,3.34150291692445,2.02375901146368,3.44862206360455,3.37648023653384,2.29163266603278,4.89083433666378,3.89124544260085,2.74561413188081,7.18841032636773,8.55924179637558,5.30464044294753,6.56705082662491,9.32866550313943,10.1313139486307,0.923765950833023,1.13694847062291,2.11854469374634,0.848725428875941,1.17345124144251,1.00503754465089,1.42826184531608,1.17080188714679,1.57635144106191,1.99318220683897,2.39182152986231,0.491589944147214,0.690739927463582,0.867894351489069,0,0,14.7529281905711,31.1808523324348,4.81651769963376,6.21221938938677,5.24591825205361,3.7870639080656,5.04813151066011,6.24701990874622,11.2020166821055,2.62865677747807,2.00518806674155,2.83076530788832,5.66734982344852,5.84511715822624,5.13874111330481,22.4924921495265,8.23252494207958,6.58842733568844,12.0536349921646,9.07335676348945,3.98235415019888,3.8844901784797,5.13950046840077,6.41257271170054,5.02013217897314,5.22639751504677,9.8202751403924,7.99774204850512,8.91243445961803,6.63677191665214,9.48767477174989,7.21948802737308,10.5536277783674,13.6846431463796,10.7367707539686,11.1455258216428,12.4138163549592,14.2695054081656,15.7967059778036,8.82948352432338,2.58138878870081,5.2958017715955,4.19003956304428,12.5313552235525,15.5005849628069,14.4751019827574,12.4147237763262,9.84845398470368,12.5336759750836,8.34413859047294,0.170870880797853,4.95328483111734,2.59272338317596,0.188368457004691,0.27338845544205,0,0.509935289981566,0.839708713941948,0.829199842826543,10.5013767981662,7.27572785236611,6.30290348093231,11.1245501046455,14.2180041289839,9.17122767733946,9.84509728609191,8.84391976261094,14.6583327511057,8.81381818384192,3.10669656543463,0.56369293868419,23.0255480907727,25.480607530393,24.306398543006,18.8573342277487,18.9230860549672,21.1243029562357,6.2498104725096,4.50895181030557,1.69108884578204,3.74439008135225,0.948033361884535,3.04087822935246,3.80030541509861,2.85825810551149,3.75956060901711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| ||
|short_description=p1@Lgr4 | |short_description=p1@Lgr4 | ||
}} | }} |
Latest revision as of 22:44, 1 October 2015
Short description: | p1@Lgr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lgr4_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENSMUST00000046548, ENSMUST00000111037, NM_172671, uc008lmq.1_5end |
EntrezGene: | Lgr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.47e-07 | 9 |
epithelial cell of alimentary canal | 8.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-12 | 31 |
gastrointestinal system | 1.57e-09 | 47 |
mucosa | 6.26e-09 | 15 |
intestinal mucosa | 2.75e-08 | 13 |
wall of intestine | 2.75e-08 | 13 |
gastrointestinal system mucosa | 2.75e-08 | 13 |
epithelium of mucosa | 8.47e-07 | 9 |
gastrointestinal system epithelium | 8.47e-07 | 9 |
intestinal epithelium | 8.47e-07 | 9 |