FFCP PHASE1:Mm9::chr1:94745160..94745194,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94745160..94745194,+ | |||
|description=CAGE_peak_at_chr1:94745160..94745194,+ | |description=CAGE_peak_at_chr1:94745160..94745194,+ | ||
|id=chr1:94745160..94745194,+ | |id=chr1:94745160..94745194,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.21e-17!23;CL:0000337!3.21e-17!23;CL:0000540!5.82e-10!33;CL:0000047!5.82e-10!33;CL:0000031!5.82e-10!33;CL:0000404!5.82e-10!33;CL:0000393!4.53e-07!39;CL:0000211!4.53e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.98e-18,23;CL:0000337,3.98e-18,23;CL:0000540,6.50e-11,33;CL:0000047,6.50e-11,33;CL:0000031,6.50e-11,33;CL:0000404,6.50e-11,33;CL:0000393,2.04e-08,39;CL:0000211,2.04e-08,39;CL:0002319,3.65e-07,43;CL:0000221,6.87e-07,44;CL:0000133,6.87e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.00e-15!71;UBERON:0003075!1.00e-15!71;UBERON:0007284!1.00e-15!71;UBERON:0000153!1.24e-14!94;UBERON:0007811!2.40e-14!86;UBERON:0003056!4.56e-14!49;UBERON:0001049!4.87e-14!52;UBERON:0005068!4.87e-14!52;UBERON:0006241!4.87e-14!52;UBERON:0007135!4.87e-14!52;UBERON:0000033!9.22e-14!63;UBERON:0002020!1.10e-13!34;UBERON:0001017!2.19e-12!73;UBERON:0005743!2.19e-12!73;UBERON:0004121!8.54e-12!102;UBERON:0000924!8.54e-12!102;UBERON:0006601!8.54e-12!102;UBERON:0000073!1.31e-11!75;UBERON:0001016!1.31e-11!75;UBERON:0000955!3.44e-11!50;UBERON:0006238!3.44e-11!50;UBERON:0003080!3.58e-11!40;UBERON:0002616!5.31e-11!49;UBERON:0002780!1.55e-10!39;UBERON:0001890!1.55e-10!39;UBERON:0006240!1.55e-10!39;UBERON:0002791!9.44e-10!29;UBERON:0003528!9.44e-10!29;UBERON:0001893!9.44e-10!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.82e-14,64;UBERON:0003075,3.82e-14,64;UBERON:0007284,3.82e-14,64;UBERON:0002020,3.17e-13,34;UBERON:0001049,3.47e-13,52;UBERON:0005068,3.47e-13,52;UBERON:0006241,3.47e-13,52;UBERON:0007135,3.47e-13,52;UBERON:0000073,3.22e-12,54;UBERON:0010371,2.85e-11,73;UBERON:0003056,6.86e-11,49;UBERON:0001017,8.32e-11,73;UBERON:0001016,2.76e-10,75;UBERON:0004121,8.83e-10,95;UBERON:0000924,8.83e-10,95;UBERON:0006601,8.83e-10,95;UBERON:0002240,1.16e-09,6;UBERON:0005174,1.16e-09,6;UBERON:0001137,1.16e-09,6;UBERON:0003080,6.11e-09,40;UBERON:0001948,1.14e-08,5;UBERON:0002315,1.14e-08,5;UBERON:0002780,3.69e-08,39;UBERON:0001890,3.69e-08,39;UBERON:0006240,3.69e-08,39;UBERON:0003528,4.76e-08,29;UBERON:0002791,4.76e-08,29;UBERON:0001893,4.76e-08,29;UBERON:0002616,6.23e-08,46;UBERON:0000955,1.20e-07,47;UBERON:0006238,1.20e-07,47;UBERON:0010314,3.58e-07,92 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26022798234954,7.93486468908049,5.07065122804943,0,0,0,0,0,0.299600110518405,0,1.65903379693564,2.16009501330705,0.841299845405528,6.56997264128748,5.96345060569357,2.57230678351403,2.97120960156533,5.51531271966013,1.10115880999389,0.893811366596314,0.768032666281217,8.17694983927202,5.76372154695181,6.25096044668112,0.837548997004143,2.25105044012672,0.45839474333043,7.66034322231536,5.83723891276322,9.87917062874093,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24685959107234,0.915001205637253,10.3036568732549,0.347648640384553,0.767146371990992,1.0389402227978,1.46017136760982,0,0,0,0,0.130120442962704,1.14951052216736,0.900310649026746,1.65775299619287,2.17716797284249,1.5373646434182,1.59292931751539,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,1.66828349535359,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,8.33527360272204,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0,0.502670417600539,0.795825888164603,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0.214337035031592,0,0.713475270408282,1.15184314421485,1.2178597964584,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,1.84879722896689,1.94881234466693,1.79026695667481,0.993406773906324,0.841368146639782,1.32920574457119,0.504832249740738,0.457240839929999,0.504130925684203,0.487289403698762,0,0.584384510907845,0,0,0,0,0,0,0,0,0,5.0827665835536,0.920650473014354,1.71868654031819,1.71853182343688,0,0.755393897389701,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0.399024873401031,2.04880326904961,0.243106717068294,1.25767897576789,0.551530525350042,1.55572709461131,2.06035057238894,1.60459604795908,1.26348605881899,1.2673964994512,2.26351609663291,1.40462261204824,1.02440243847791,1.14870937911227,0.476293691283074,1.15884325944855,1.54327376370964,1.23625770240992,1.03039244094078,0.342869252385415,2.48466128623072,1.66905332963125,1.30811774969096,1.59985946706062,1.18460451048347,2.19513567447327,2.89376682581627,1.62964936615034,2.24456908663095,2.01679530811096,1.87158516513571,2.86461730218783,1.85924209423159,0.771626443924566,3.49734809113124,0.935726433781634,2.36358159453128,0.956441660344217,0.441182838239031,0 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26022798234954,7.93486468908049,5.07065122804943,0,0,0,0,0,0.299600110518405,0,1.65903379693564,2.16009501330705,0.841299845405528,6.56997264128748,5.96345060569357,2.57230678351403,2.97120960156533,5.51531271966013,1.10115880999389,0.893811366596314,0.768032666281217,8.17694983927202,5.76372154695181,6.25096044668112,0.837548997004143,2.25105044012672,0.45839474333043,7.66034322231536,5.83723891276322,9.87917062874093,0,0,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24685959107234,0.915001205637253,10.3036568732549,0.347648640384553,0.767146371990992,1.0389402227978,1.46017136760982,0,0,0,0,0.130120442962704,1.14951052216736,0.900310649026746,1.65775299619287,2.17716797284249,1.5373646434182,1.59292931751539,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,1.66828349535359,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,8.33527360272204,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0,0.502670417600539,0.795825888164603,0,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0,0.214337035031592,0,0.713475270408282,1.15184314421485,1.2178597964584,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.648032044930808,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,1.84879722896689,1.94881234466693,1.79026695667481,0.993406773906324,0.841368146639782,1.32920574457119,0.504832249740738,0.457240839929999,0.504130925684203,0.487289403698762,0,0.584384510907845,0,0,0,0,0,0,0,0,0,5.0827665835536,0.920650473014354,1.71868654031819,1.71853182343688,0,0.755393897389701,0,0.45032120322422,0,1.03552062350364,0.103787347584177,0.399024873401031,2.04880326904961,0.243106717068294,1.25767897576789,0.551530525350042,1.55572709461131,2.06035057238894,1.60459604795908,1.26348605881899,1.2673964994512,2.26351609663291,1.40462261204824,1.02440243847791,1.14870937911227,0.476293691283074,1.15884325944855,1.54327376370964,1.23625770240992,1.03039244094078,0.342869252385415,2.48466128623072,1.66905332963125,1.30811774969096,1.59985946706062,1.18460451048347,2.19513567447327,2.89376682581627,1.62964936615034,2.24456908663095,2.01679530811096,1.87158516513571,2.86461730218783,1.85924209423159,0.771626443924566,3.49734809113124,0.935726433781634,2.36358159453128,0.956441660344217,0.441182838239031,0 | ||
|short_description=p@chr1:94745160..94745194,+ | |short_description=p@chr1:94745160..94745194,+ | ||
}} | }} |
Latest revision as of 05:27, 6 August 2015
Short description: | p@chr1:94745160..94745194, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:94745160..94745194, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.98e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.98e-18 | 23 |
neuron | 6.50e-11 | 33 |
neuronal stem cell | 6.50e-11 | 33 |
neuroblast | 6.50e-11 | 33 |
electrically signaling cell | 6.50e-11 | 33 |
electrically responsive cell | 2.04e-08 | 39 |
electrically active cell | 2.04e-08 | 39 |
neural cell | 3.65e-07 | 43 |
ectodermal cell | 6.87e-07 | 44 |
neurectodermal cell | 6.87e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.82e-14 | 64 |
neural plate | 3.82e-14 | 64 |
presumptive neural plate | 3.82e-14 | 64 |
gray matter | 3.17e-13 | 34 |
neural tube | 3.47e-13 | 52 |
neural rod | 3.47e-13 | 52 |
future spinal cord | 3.47e-13 | 52 |
neural keel | 3.47e-13 | 52 |
regional part of nervous system | 3.22e-12 | 54 |
ecto-epithelium | 2.85e-11 | 73 |
pre-chordal neural plate | 6.86e-11 | 49 |
central nervous system | 8.32e-11 | 73 |
nervous system | 2.76e-10 | 75 |
ectoderm-derived structure | 8.83e-10 | 95 |
ectoderm | 8.83e-10 | 95 |
presumptive ectoderm | 8.83e-10 | 95 |
spinal cord | 1.16e-09 | 6 |
dorsal region element | 1.16e-09 | 6 |
dorsum | 1.16e-09 | 6 |
anterior neural tube | 6.11e-09 | 40 |
regional part of spinal cord | 1.14e-08 | 5 |
gray matter of spinal cord | 1.14e-08 | 5 |
regional part of forebrain | 3.69e-08 | 39 |
forebrain | 3.69e-08 | 39 |
future forebrain | 3.69e-08 | 39 |
brain grey matter | 4.76e-08 | 29 |
regional part of telencephalon | 4.76e-08 | 29 |
telencephalon | 4.76e-08 | 29 |
regional part of brain | 6.23e-08 | 46 |
brain | 1.20e-07 | 47 |
future brain | 1.20e-07 | 47 |
structure with developmental contribution from neural crest | 3.58e-07 | 92 |