FFCP PHASE1:Mm9::chr17:3397220..3397242,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=24001 | |EntrezGene=24001 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6ZPF3 | |UniProt=Q6ZPF3 | ||
|association_with_transcript=13bp_to_ENSMUST00000072156,NM_011878,uc008aep.1,uc008aeq.1_5end | |association_with_transcript=13bp_to_ENSMUST00000072156,NM_011878,uc008aep.1,uc008aeq.1_5end | ||
|cluster_id=chr17:3397220..3397242,+ | |||
|description=CAGE_peak_3_at_Tiam2_5end | |description=CAGE_peak_3_at_Tiam2_5end | ||
|id=chr17:3397220..3397242,+ | |id=chr17:3397220..3397242,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!6.13e-09!10;UBERON:0000411!6.13e-09!10;UBERON:0001950!6.13e-09!10;UBERON:0000956!4.21e-07!21;UBERON:0001869!4.21e-07!21;UBERON:0000203!4.21e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.51e-13,10;UBERON:0000411,5.51e-13,10;UBERON:0001950,5.51e-13,10;UBERON:0007100,3.09e-07,18;UBERON:0000948,3.09e-07,18;UBERON:0005498,3.09e-07,18;UBERON:0004140,3.09e-07,18;UBERON:0009881,3.09e-07,18;UBERON:0004141,3.09e-07,18;UBERON:0003084,3.09e-07,18;UBERON:0007005,3.09e-07,18;UBERON:0004139,3.09e-07,18;UBERON:0004291,3.09e-07,18;UBERON:0005418,4.20e-07,5;UBERON:0002472,4.20e-07,5;UBERON:0008784,4.20e-07,5;UBERON:0006058,4.20e-07,5;UBERON:0004709,4.20e-07,5;UBERON:0002529,4.20e-07,5;UBERON:0010538,4.20e-07,5;UBERON:0005420,4.20e-07,5;UBERON:0010758,4.20e-07,5;UBERON:0000978,4.20e-07,5;UBERON:0002103,4.20e-07,5;UBERON:0000376,4.20e-07,5;UBERON:0000154,4.20e-07,5;UBERON:0010709,4.20e-07,5;UBERON:0005730,4.20e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.244981598429908,0.383381884072945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0.681721290312231,0.779358013808606,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,1.44599356919912,1.76922110389975,6.14714029800155,5.30019644304944,4.84875253135222,1.86391761218122,0,0.209446706813455,0,1.91704199209472,0.599902730993408,0.508280908292259,0,2.28750301409313,3.8952849154988,2.43354048269187,3.58001640262463,0.20778804455956,0.973447578406546,0.203678727700633,3.73220911830279,0,0.420883711772948,0,0,0,0.452114453507145,0.748401490664606,0.896796041993948,0.468508622798644,0.258703370739016,0,0.189106080167819,0.351902248327898,0.657587197282725,1.39023624612799,4.179025998266,2.67516777330327,0,0.702213187313235,0.51469581422943,0.568326998791185,0.828503090142008,1.40715635988658,0.540186184383045,1.18372367792605,1.37734962223183,2.31400669331067,2.55787339225449,1.87791380979733,2.33530684734339,3.45575684818309,2.13417703302824,1.54030738137126,2.48539978623065,1.53685080703735,1.07365135008297,0.630869845692382,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,1.41871629695572,1.55025282754142,0.956728611944923,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0.659880491890142,1.32745138339963,0,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0,0,0.8244312647074,0.484393280087717,0.844380948994182,0,0.164140899745061,0,0,0,0,0,0,0,0,1.01987057996313,2.23922323717853,1.24379976423981,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0.102710957164827,0,0.179026695667481,0,0,0.295379054349154,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0.375364950902364,0.549454872801795,0,0,7.90652579663893,2.76195141904306,6.30185064783336,7.56154002312225,2.74033007908257,1.5107877947794,4.05013500139084,3.60256962579376,4.07828168085784,4.65984280576638,0,0,0.682934423016537,1.45864030240976,0.838452650511929,1.2869045591501,1.55572709461131,2.47242068686673,1.60459604795908,0.758091635291392,2.02783439912192,0.943131706930381,2.34103768674706,1.85672941974121,1.66562859971278,2.85776214769844,1.27472758539341,2.12200142510076,2.06042950401653,2.20798380201596,1.37147700954166,1.77475806159337,2.86123427936785,2.18019624948493,1.88218760830661,1.4384483341585,1.46342378298218,2.63069711437843,1.62964936615034,0.561142271657738,1.77952527186261,0.985044823755635,2.45538625901814,1.23949472948773,1.54325288784913,2.74791635731741,3.50897412668113,2.14871054048298,5.35607329792761,2.20591419119516,3.2461496986859 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.244981598429908,0.383381884072945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0.681721290312231,0.779358013808606,0.35333957451034,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0,0,1.44599356919912,1.76922110389975,6.14714029800155,5.30019644304944,4.84875253135222,1.86391761218122,0,0.209446706813455,0,1.91704199209472,0.599902730993408,0.508280908292259,0,2.28750301409313,3.8952849154988,2.43354048269187,3.58001640262463,0.20778804455956,0.973447578406546,0.203678727700633,3.73220911830279,0,0.420883711772948,0,0,0,0.452114453507145,0.748401490664606,0.896796041993948,0.468508622798644,0.258703370739016,0,0.189106080167819,0.351902248327898,0.657587197282725,1.39023624612799,4.179025998266,2.67516777330327,0,0.702213187313235,0.51469581422943,0.568326998791185,0.828503090142008,1.40715635988658,0.540186184383045,1.18372367792605,1.37734962223183,2.31400669331067,2.55787339225449,1.87791380979733,2.33530684734339,3.45575684818309,2.13417703302824,1.54030738137126,2.48539978623065,1.53685080703735,1.07365135008297,0.630869845692382,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,1.41871629695572,1.55025282754142,0.956728611944923,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0.659880491890142,1.32745138339963,0,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0,0,0.8244312647074,0.484393280087717,0.844380948994182,0,0.164140899745061,0,0,0,0,0,0,0,0,1.01987057996313,2.23922323717853,1.24379976423981,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0.102710957164827,0,0.179026695667481,0,0,0.295379054349154,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0.375364950902364,0.549454872801795,0,0,7.90652579663893,2.76195141904306,6.30185064783336,7.56154002312225,2.74033007908257,1.5107877947794,4.05013500139084,3.60256962579376,4.07828168085784,4.65984280576638,0,0,0.682934423016537,1.45864030240976,0.838452650511929,1.2869045591501,1.55572709461131,2.47242068686673,1.60459604795908,0.758091635291392,2.02783439912192,0.943131706930381,2.34103768674706,1.85672941974121,1.66562859971278,2.85776214769844,1.27472758539341,2.12200142510076,2.06042950401653,2.20798380201596,1.37147700954166,1.77475806159337,2.86123427936785,2.18019624948493,1.88218760830661,1.4384483341585,1.46342378298218,2.63069711437843,1.62964936615034,0.561142271657738,1.77952527186261,0.985044823755635,2.45538625901814,1.23949472948773,1.54325288784913,2.74791635731741,3.50897412668113,2.14871054048298,5.35607329792761,2.20591419119516,3.2461496986859 | ||
|short_description=p3@Tiam2 | |short_description=p3@Tiam2 | ||
}} | }} |
Latest revision as of 06:59, 26 September 2015
Short description: | p3@Tiam2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tiam2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000072156, NM_011878, uc008aep.1, uc008aeq.1_5end |
EntrezGene: | Tiam2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.51e-13 | 10 |
visual cortex | 5.51e-13 | 10 |
neocortex | 5.51e-13 | 10 |
primary circulatory organ | 3.09e-07 | 18 |
heart | 3.09e-07 | 18 |
primitive heart tube | 3.09e-07 | 18 |
primary heart field | 3.09e-07 | 18 |
anterior lateral plate mesoderm | 3.09e-07 | 18 |
heart tube | 3.09e-07 | 18 |
heart primordium | 3.09e-07 | 18 |
cardiac mesoderm | 3.09e-07 | 18 |
cardiogenic plate | 3.09e-07 | 18 |
heart rudiment | 3.09e-07 | 18 |
hindlimb bud | 4.20e-07 | 5 |
stylopod | 4.20e-07 | 5 |
lower limb segment | 4.20e-07 | 5 |
multi-limb segment region | 4.20e-07 | 5 |
pelvic appendage | 4.20e-07 | 5 |
limb segment | 4.20e-07 | 5 |
paired limb/fin segment | 4.20e-07 | 5 |
pelvic appendage bud | 4.20e-07 | 5 |
subdivision of organism along appendicular axis | 4.20e-07 | 5 |
leg | 4.20e-07 | 5 |
hindlimb | 4.20e-07 | 5 |
hindlimb stylopod | 4.20e-07 | 5 |
posterior region of body | 4.20e-07 | 5 |
pelvic complex | 4.20e-07 | 5 |
hindlimb/pelvic fin field | 4.20e-07 | 5 |