FFCP PHASE1:Hg19::chr12:120807136..120807142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=36020 | |HGNC=36020 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000477404_5end | |association_with_transcript=-100bp_to_ENST00000477404_5end | ||
|cluster_id=chr12:120807136..120807142,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_RPS27P25_5end | |description=CAGE_peak_2_at_RPS27P25_5end | ||
|id=chr12:120807136..120807142,+ | |id=chr12:120807136..120807142,+ | ||
|ontology_enrichment_celltype=CL:0000047!9.62e-11!8;CL:0000540!1.39e-10!6;CL:0000031!1.39e-10!6;CL:0000404!1.39e-10!6;CL:0002322!1.43e-09!5;CL:0002319!1.82e-07!25;CL:0002605!2.39e-07!3 | |ontology_enrichment_celltype=CL:0000047!9.62e-11!8;CL:0000540!1.39e-10!6;CL:0000031!1.39e-10!6;CL:0000404!1.39e-10!6;CL:0002322!1.43e-09!5;CL:0002319!1.82e-07!25;CL:0002605!2.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.47e-24;3!CL:0000128;1.08e-10;7!CL:0000126;1.08e-10;7!CL:0000127;1.08e-10;7!CL:0002319;4.61e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.86e-24,3;CL:0000128,9.99e-11,7;CL:0000126,9.99e-11,7;CL:0000127,9.99e-11,7;CL:0002453,9.99e-11,7;CL:0002319,4.34e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.38e-52!82;UBERON:0005743!1.27e-51!86;UBERON:0001049!2.27e-50!57;UBERON:0005068!2.27e-50!57;UBERON:0006241!2.27e-50!57;UBERON:0007135!2.27e-50!57;UBERON:0000073!3.89e-47!94;UBERON:0001016!3.89e-47!94;UBERON:0002616!4.13e-43!59;UBERON:0002780!1.25e-42!41;UBERON:0001890!1.25e-42!41;UBERON:0006240!1.25e-42!41;UBERON:0003080!2.24e-41!42;UBERON:0000955!1.10e-40!69;UBERON:0006238!1.10e-40!69;UBERON:0001893!2.35e-40!34;UBERON:0002020!9.25e-40!34;UBERON:0003528!9.25e-40!34;UBERON:0002791!8.71e-39!33;UBERON:0002346!1.20e-38!90;UBERON:0003075!1.31e-37!86;UBERON:0007284!1.31e-37!86;UBERON:0001869!4.79e-37!32;UBERON:0003056!4.11e-33!61;UBERON:0000956!1.68e-28!25;UBERON:0000203!1.68e-28!25;UBERON:0000924!1.39e-27!173;UBERON:0006601!1.39e-27!173;UBERON:0000033!1.12e-26!123;UBERON:0004121!1.88e-26!169;UBERON:0000153!9.68e-25!129;UBERON:0007811!9.68e-25!129;UBERON:0002619!3.52e-23!22;UBERON:0007023!8.49e-23!115;UBERON:0001950!1.03e-22!20;UBERON:0002420!3.13e-13!9;UBERON:0007245!3.13e-13!9;UBERON:0010009!3.13e-13!9;UBERON:0010011!3.13e-13!9;UBERON:0000454!3.13e-13!9;UBERON:0002308!1.29e-12!9;UBERON:0000125!1.29e-12!9;UBERON:0000200!2.86e-11!6;UBERON:0002298!1.25e-10!8;UBERON:0003076!3.44e-10!15;UBERON:0003057!3.44e-10!15;UBERON:0009663!6.88e-10!7;UBERON:0000025!4.93e-09!194;UBERON:0000369!1.16e-08!4;UBERON:0002435!1.16e-08!4;UBERON:0000204!1.16e-08!4;UBERON:0010082!1.16e-08!4;UBERON:0001871!3.69e-08!7;UBERON:0000922!4.98e-08!612;UBERON:0000064!5.79e-08!219;UBERON:0004111!2.49e-07!241;UBERON:0000349!6.16e-07!5;UBERON:0005383!6.79e-07!3;UBERON:0005382!6.79e-07!3;UBERON:0001896!9.97e-07!3;UBERON:0005290!9.97e-07!3;UBERON:0010096!9.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.60e-26;34!UBERON:0001869;4.11e-24;32!UBERON:0002791;4.62e-24;32!UBERON:0002780;1.14e-22;41!UBERON:0001890;1.14e-22;41!UBERON:0003528;1.22e-22;34!UBERON:0002020;1.22e-22;34!UBERON:0000956;1.56e-22;25!UBERON:0000203;1.56e-22;25!UBERON:0000073;1.39e-18;53!UBERON:0002616;1.39e-18;53!UBERON:0002619;1.94e-11;22!UBERON:0000955;4.59e-11;68!UBERON:0002336;3.05e-09;1!UBERON:0011215;3.05e-09;1!UBERON:0001018;3.05e-09;1!UBERON:0002473;3.05e-09;1!UBERON:0005340;3.05e-09;1!UBERON:0003544;3.05e-09;1!UBERON:0005970;3.05e-09;1!UBERON:0002316;3.05e-09;1!UBERON:0001020;3.05e-09;1!UBERON:0002437;3.05e-09;1!UBERON:0002902;6.72e-09;1!UBERON:0001882;6.72e-09;1!UBERON:0009899;6.72e-09;1!UBERON:0005403;6.72e-09;1!UBERON:0001950;7.48e-09;20!UBERON:0000369;1.16e-08;4!UBERON:0002435;1.16e-08;4!UBERON:0000204;1.16e-08;4!UBERON:0001017;5.06e-08;75!UBERON:0001016;1.58e-07;83!UBERON:0000349;4.29e-07;5!UBERON:0002021;5.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,1.98e-29,34;UBERON:0002780,1.99e-28,41;UBERON:0001890,1.99e-28,41;UBERON:0003080,1.99e-28,41;UBERON:0006240,1.99e-28,41;UBERON:0002791,3.33e-26,32;UBERON:0001869,3.33e-26,32;UBERON:0000073,3.35e-25,53;UBERON:0002616,3.35e-25,53;UBERON:0003056,3.48e-25,61;UBERON:0003528,1.33e-24,34;UBERON:0002020,1.33e-24,34;UBERON:0001049,9.62e-24,56;UBERON:0005068,9.62e-24,56;UBERON:0006241,9.62e-24,56;UBERON:0007135,9.62e-24,56;UBERON:0000956,1.47e-22,25;UBERON:0000203,1.47e-22,25;UBERON:0003075,8.48e-21,82;UBERON:0007284,8.48e-21,82;UBERON:0001017,1.13e-20,81;UBERON:0002346,1.05e-19,86;UBERON:0000955,7.26e-19,68;UBERON:0006238,7.26e-19,68;UBERON:0001016,2.30e-18,89;UBERON:0010371,7.99e-16,104;UBERON:0010314,7.19e-12,132;UBERON:0002619,1.94e-11,22;UBERON:0004121,4.76e-11,171;UBERON:0000924,4.76e-11,171;UBERON:0006601,4.76e-11,171;UBERON:0002336,3.31e-09,1;UBERON:0011215,3.31e-09,1;UBERON:0001018,3.31e-09,1;UBERON:0002473,3.31e-09,1;UBERON:0005340,3.31e-09,1;UBERON:0003544,3.31e-09,1;UBERON:0005970,3.31e-09,1;UBERON:0002316,3.31e-09,1;UBERON:0001020,3.31e-09,1;UBERON:0002437,3.31e-09,1;UBERON:0002902,6.72e-09,1;UBERON:0009899,6.72e-09,1;UBERON:0001950,7.49e-09,20;UBERON:0011216,9.60e-09,223;UBERON:0001882,1.07e-08,1;UBERON:0005403,1.07e-08,1;UBERON:0000369,1.35e-08,4;UBERON:0002435,1.35e-08,4;UBERON:0000204,1.35e-08,4;UBERON:0010082,1.35e-08,4;UBERON:0000349,5.15e-07,5;UBERON:0002021,7.18e-07,5 | |||
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|short_description=p2@RPS27P25 | |short_description=p2@RPS27P25 | ||
}} | }} |
Latest revision as of 20:13, 16 September 2015
Short description: | p2@RPS27P25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS27P25_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -100bp_to_ENST00000477404_5end |
EntrezGene: | NA |
HGNC: | 36020 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.86e-24 | 3 |
oligodendrocyte | 9.99e-11 | 7 |
macroglial cell | 9.99e-11 | 7 |
astrocyte | 9.99e-11 | 7 |
oligodendrocyte precursor cell | 9.99e-11 | 7 |
neural cell | 4.34e-07 | 25 |