FFCP PHASE1:Hg19::chr12:113496099..113496108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=104bp_to_AB384763_5end | |association_with_transcript=104bp_to_AB384763_5end | ||
|cluster_id=chr12:113496099..113496108,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_3_at_AB384763_5end | |description=CAGE_peak_3_at_AB384763_5end | ||
|id=chr12:113496099..113496108,+ | |id=chr12:113496099..113496108,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.04e-19!24;CL:0000826!3.04e-19!24;CL:0000838!6.38e-13!52;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000817!4.66e-11!3;CL:0000819!3.06e-09!1 | |ontology_enrichment_celltype=CL:0000945!3.04e-19!24;CL:0000826!3.04e-19!24;CL:0000838!6.38e-13!52;CL:0000542!1.20e-12!53;CL:0000051!1.20e-12!53;CL:0000817!4.66e-11!3;CL:0000819!3.06e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000785;1.46e-50;1!CL:0000819;1.46e-50;1!CL:0000945;2.00e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.46e-50,1;CL:0000785,4.32e-26,2;CL:0000955,4.32e-26,2;CL:0000818,4.32e-26,2;CL:0000954,4.32e-26,2;CL:0000816,4.32e-26,2;CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000817,6.76e-18,3;CL:0000838,1.78e-09,52;CL:0000542,2.59e-09,53;CL:0000051,2.59e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;4.32e-26;2!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease=DOID:0060058!2.45e-27!10;DOID:2531!1.11e-10!51;DOID:0060083!1.11e-10!51;DOID:0060073!3.06e-09!1;DOID:8675!3.06e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.78e-79;10!DOID:0060073;1.46e-50;1!DOID:8675;1.46e-50;1!DOID:2531;4.32e-10;51!DOID:0060083;4.32e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.79e-79,10;DOID:0060073,1.46e-50,1;DOID:8675,1.46e-50,1;DOID:2531,2.36e-16,51;DOID:0060083,2.36e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.03e-22!3;UBERON:0004854!1.03e-22!3;UBERON:0009034!1.03e-22!3;UBERON:0002095!1.03e-22!3;UBERON:0004782!1.03e-22!3;UBERON:0003281!1.03e-22!3;UBERON:0009664!1.03e-22!3;UBERON:0002296!1.03e-22!3;UBERON:0005602!1.03e-22!3;UBERON:0001179!1.03e-22!3;UBERON:0006293!1.03e-22!3;UBERON:0005383!1.32e-10!3;UBERON:0005382!1.32e-10!3;UBERON:0004177!4.62e-10!7;UBERON:0003112!5.28e-09!1;UBERON:0000032!5.28e-09!1;UBERON:0005253!5.28e-09!1;UBERON:0003128!5.28e-09!1;UBERON:0002241!5.28e-09!1;UBERON:0001703!5.28e-09!1;UBERON:0004761!5.28e-09!1;UBERON:0009617!5.28e-09!1;UBERON:0000945!7.27e-09!8;UBERON:0010039!7.27e-09!8;UBERON:0001874!1.22e-08!1;UBERON:0000369!3.59e-08!4;UBERON:0002435!3.59e-08!4;UBERON:0000204!3.59e-08!4;UBERON:0010082!3.59e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.45e-18;3!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.46e-18,3;UBERON:0004854,9.46e-18,3;UBERON:0009034,9.46e-18,3;UBERON:0002095,9.46e-18,3;UBERON:0004782,9.46e-18,3;UBERON:0003281,9.46e-18,3;UBERON:0009664,9.46e-18,3;UBERON:0002296,9.46e-18,3;UBERON:0005602,9.46e-18,3;UBERON:0001179,9.46e-18,3;UBERON:0006293,9.46e-18,3;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8 | |||
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|short_description=p3@AB384763 | |short_description=p3@AB384763 | ||
}} | }} |
Latest revision as of 05:10, 24 July 2015
Short description: | p3@AB384763 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB384763_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 104bp_to_AB384763_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.46e-50 | 1 |
mature B cell | 4.32e-26 | 2 |
pre-B-II cell | 4.32e-26 | 2 |
transitional stage B cell | 4.32e-26 | 2 |
small pre-B-II cell | 4.32e-26 | 2 |
immature B cell | 4.32e-26 | 2 |
lymphocyte of B lineage | 2.00e-19 | 24 |
pro-B cell | 2.00e-19 | 24 |
precursor B cell | 6.76e-18 | 3 |
lymphoid lineage restricted progenitor cell | 1.78e-09 | 52 |
lymphocyte | 2.59e-09 | 53 |
common lymphoid progenitor | 2.59e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.46e-18 | 3 |
gastrointestinal system mesentery | 9.46e-18 | 3 |
stomach region | 9.46e-18 | 3 |
mesentery | 9.46e-18 | 3 |
gastrointestinal system serosa | 9.46e-18 | 3 |
mesentery of stomach | 9.46e-18 | 3 |
gut mesentery | 9.46e-18 | 3 |
dorsal mesentery | 9.46e-18 | 3 |
dorsal mesogastrium | 9.46e-18 | 3 |
peritoneal cavity | 9.46e-18 | 3 |
spleen primordium | 9.46e-18 | 3 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.79e-79 | 10 |
lymphatic system cancer | 1.46e-50 | 1 |
lymphosarcoma | 1.46e-50 | 1 |
hematologic cancer | 2.36e-16 | 51 |
immune system cancer | 2.36e-16 | 51 |