FFCP PHASE1:Hg19::chr12:111843749..111843763,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10019 | |EntrezGene=10019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29605 | |HGNC=29605 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQQ2,Q59H48 | |UniProt=Q9UQQ2,Q59H48 | ||
|association_with_transcript=0bp_to_ENST00000341259,NM_005475,uc001tse.2_5end | |association_with_transcript=0bp_to_ENST00000341259,NM_005475,uc001tse.2_5end | ||
|cluster_id=chr12:111843749..111843763,+ | |||
|description=CAGE_peak_3_at_SH2B3_5end | |description=CAGE_peak_3_at_SH2B3_5end | ||
|id=chr12:111843749..111843763,+ | |id=chr12:111843749..111843763,+ | ||
|ontology_enrichment_celltype=CL:0000557!2.91e-28!71;CL:0000839!8.68e-27!70;CL:0000766!1.24e-26!76;CL:0002057!1.51e-26!42;CL:0000763!1.18e-25!112;CL:0000049!1.18e-25!112;CL:0002009!3.70e-25!65;CL:0002194!8.62e-24!63;CL:0000576!8.62e-24!63;CL:0000040!8.62e-24!63;CL:0000559!8.62e-24!63;CL:0000860!2.75e-23!45;CL:0000988!4.25e-17!182;CL:0000048!5.19e-17!430;CL:0000037!2.32e-16!172;CL:0000566!2.32e-16!172;CL:0000723!1.42e-15!436;CL:0000738!2.75e-15!140;CL:0000034!3.07e-15!444;CL:0002320!3.16e-14!365;CL:0002032!5.26e-14!165;CL:0000837!5.26e-14!165;CL:0000115!5.72e-14!35;CL:0000134!1.44e-13!358;CL:0002031!1.70e-12!124;CL:0002139!8.02e-12!24;CL:0002371!1.86e-11!591;CL:0000219!2.76e-11!390;CL:0002087!1.16e-10!119;CL:0000071!2.01e-09!18;CL:0002546!2.01e-09!18;CL:0000144!3.03e-09!625;CL:0002078!5.13e-09!44;CL:0002393!8.37e-07!9;CL:0002397!8.37e-07!9 | |ontology_enrichment_celltype=CL:0000557!2.91e-28!71;CL:0000839!8.68e-27!70;CL:0000766!1.24e-26!76;CL:0002057!1.51e-26!42;CL:0000763!1.18e-25!112;CL:0000049!1.18e-25!112;CL:0002009!3.70e-25!65;CL:0002194!8.62e-24!63;CL:0000576!8.62e-24!63;CL:0000040!8.62e-24!63;CL:0000559!8.62e-24!63;CL:0000860!2.75e-23!45;CL:0000988!4.25e-17!182;CL:0000048!5.19e-17!430;CL:0000037!2.32e-16!172;CL:0000566!2.32e-16!172;CL:0000723!1.42e-15!436;CL:0000738!2.75e-15!140;CL:0000034!3.07e-15!444;CL:0002320!3.16e-14!365;CL:0002032!5.26e-14!165;CL:0000837!5.26e-14!165;CL:0000115!5.72e-14!35;CL:0000134!1.44e-13!358;CL:0002031!1.70e-12!124;CL:0002139!8.02e-12!24;CL:0002371!1.86e-11!591;CL:0000219!2.76e-11!390;CL:0002087!1.16e-10!119;CL:0000071!2.01e-09!18;CL:0002546!2.01e-09!18;CL:0000144!3.03e-09!625;CL:0002078!5.13e-09!44;CL:0002393!8.37e-07!9;CL:0002397!8.37e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.06e-29;33!CL:0002057;7.06e-29;33!CL:0000473;1.69e-25;39!CL:0000234;1.69e-25;39!CL:0000576;1.35e-21;48!CL:0000766;1.31e-19;69!CL:0002139;2.84e-18;24!CL:0000115;6.98e-17;36!CL:0000071;3.30e-14;18!CL:0002078;3.14e-09;45!CL:0000763;6.80e-09;100!CL:0000451;9.10e-09;10!CL:1000413;1.99e-08;9!CL:0002393;1.99e-07;6!CL:0002397;1.99e-07;6!CL:0000840;4.42e-07;5!CL:0000738;6.59e-07;136!CL:0000990;8.32e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,8.60e-47,67;CL:0000839,2.45e-44,66;CL:0000766,4.82e-44,72;CL:0002009,8.92e-42,61;CL:0000473,9.06e-42,48;CL:0000234,9.06e-42,48;CL:0000860,8.72e-40,42;CL:0002057,8.72e-40,42;CL:0002194,1.56e-39,59;CL:0000576,1.56e-39,59;CL:0000040,1.56e-39,59;CL:0000559,1.56e-39,59;CL:0000763,2.46e-36,108;CL:0000049,2.46e-36,108;CL:0000738,8.39e-26,136;CL:0000988,1.61e-23,177;CL:0000037,1.72e-23,168;CL:0002031,1.09e-21,120;CL:0002032,3.42e-20,161;CL:0000837,3.42e-20,161;CL:0000115,1.27e-19,36;CL:0002087,4.19e-18,115;CL:0002139,7.58e-18,24;CL:0000048,8.83e-16,427;CL:0002320,3.85e-15,361;CL:0000723,5.85e-15,433;CL:0000134,6.76e-15,354;CL:0000034,7.85e-15,441;CL:0000071,4.89e-14,18;CL:0002546,4.89e-14,18;CL:0002078,1.67e-13,45;CL:0000219,7.12e-13,386;CL:0002393,6.81e-10,9;CL:0002397,6.81e-10,9;CL:0000213,5.02e-09,58;CL:0000215,5.02e-09,58;CL:0000451,7.07e-09,10;CL:1000413,1.59e-08,9;CL:0000840,4.27e-07,5;CL:0001029,4.27e-07,5;CL:0000990,6.50e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-28;42!CL:0002546;3.30e-14;18!CL:0000049;7.68e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.37e-30!112;UBERON:0002390!2.48e-26!102;UBERON:0003061!2.48e-26!102;UBERON:0002371!2.80e-26!80;UBERON:0001474!1.57e-23!86;UBERON:0002405!1.08e-22!115;UBERON:0003081!5.70e-22!216;UBERON:0004765!1.55e-20!101;UBERON:0001434!1.55e-20!101;UBERON:0002204!3.20e-17!167;UBERON:0002384!2.78e-14!375;UBERON:0002049!1.89e-10!79;UBERON:0007798!1.89e-10!79;UBERON:0001009!4.25e-10!113;UBERON:0004535!6.96e-10!110;UBERON:0001986!2.01e-09!18;UBERON:0004638!2.01e-09!18;UBERON:0004852!2.01e-09!18;UBERON:0000055!4.52e-09!69;UBERON:0000926!3.47e-08!448;UBERON:0004120!3.47e-08!448;UBERON:0006603!3.47e-08!448;UBERON:0000487!3.59e-07!22;UBERON:0001981!6.77e-07!60;UBERON:0007500!6.77e-07!60;UBERON:0004537!6.77e-07!60;UBERON:0006965!6.77e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.30e-14;18!UBERON:0001986;3.30e-14;18!UBERON:0004852;3.30e-14;18!UBERON:0000487;1.56e-10;22!UBERON:0006914;1.36e-08;25!UBERON:0003915;1.99e-08;9!UBERON:0004700;1.99e-08;9!UBERON:0001917;1.99e-08;9 | |||
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|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,1.26343974685366,0,0.491467873003018,0,0,0.263766978228454,0.990130823680373,1.32558950291166,0,0,1.46062018077475,0.487932798790507,0.246242116153576,1.02000345622126,0,0,0.273748850145768,0.376627918784408,0.458480434487708,0.492603536699674,0.393553906568396,5.11373559903575,1.15148819429164,7.89562228911988,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,2.05520307534393,12.1878989877013,11.0299446108578,13.0206522429511,0.895661896959697,0.647787332037959,1.54545340580512,3.63495596948912,3.77875943688809,7.27752183563449,10.6917356976615,11.1015329765893,16.7241440283356,10.9323109082417,13.0641960329841,11.1146648047635,17.5820297175675,15.4916324060118,27.0852973188684,10.5415710143859,5.73102915121476,5.61808711112712,18.3650335422542,17.9720255162612,22.3767994029664,0.989553900560148,4.58766412529753,2.98357325372886,17.7027635563436,15.3194010666608,16.1933784738849,13.5674279238641,15.1230046341858,11.5110087693712,10.8971910474006,10.6800514436394,15.8231193720442,6.12640330304631,6.59073329891635,7.96702852931828,4.15615935242032,3.90459921387916,1.76798145366788,5.70025487482497,4.97291692997725,5.47992461293902,0,0,1.77901850772711,1.70692089026603,0,0,0.661044872784862,0.954053754535364,1.1384259382189,1.17447437874188,1.14681968437569,1.32171328579026,2.80254281490768,0.263384084775077,0.393419540227666,0,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0.130059347559878,0.657751618414705,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,0.12786256184353,0,0,0,1.5905718941022,0.486634870302636,0.378139268656271,1.55210578223795,0.702678285545008,0.261958150995425,0,0,4.86821090482025,3.30846500868608,4.65352861816028,13.3554749610991,14.2998727695032,9.28643753323912,2.18638648103376,8.60234595106124,5.9013885273291,5.6530794192401,6.29249154314859,4.67700671298115,2.50793959844173,11.1119206442811,9.60568909254118,3.68192674041137,2.01414658554573,2.28081631715554,1.22031028774085,2.94130464276695,5.67099363517232,2.14319347881791,2.02076435363553,3.71617885594963,7.66583187329416,4.74632829784064,4.03043836646896,2.63560834872127,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0,1.88594940897563,1.30769522490767,0.605429710579726,0,1.64025002283658,3.1216007683032,3.99330275081114,8.96692083310806,1.05691048779388,4.37056949793955,2.66856532734272,11.8409419327838,2.57952066354713,7.02615311995205,1.18800285728205,0.989067717114227,0.910161361938026,2.15585442544872,0.841680569770331,1.50142223846357,4.43302584774693,0,1.83892677479412,2.55404700141215,0.567160915800105,0.717558542755448,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,0,0.37223371266318,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0,0.403008392910561,0.339121184620975,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,4.69348596989448,0.643240938192885,8.28809528114883,0,0,0,0,0,0,0,0,0,0.196221465125346,0,7.38155454624648,4.20725321410337,0,0,0,0,0,0.441463099414651,0.122988438543114,1.3725424823882,0.109750285408626,0,0,0,0.651616610620649,1.03993478527958,2.88662684050547,0.231860809950154,0.469634776943287,1.01056513432752,3.24089858803628,1.14152491340759,0,0,0.984868024349589,9.12616634043027,4.90482835552803,0,0,0,0.179117045405697,0,0,1.97065295158377,4.57851856868775,8.08579650609011,3.747118788841,7.19581870530366,0.063497894292169,0.763976851116555,1.17217447210047,5.13217338068116,0.514137463516618,0.300343057843917,0.285826432630578,4.82163662685051,0.43596006883328,7.1871520104531,0.387815147273333,0,3.381211010224,0.26593811658487,1.04007436911366,2.31486636835928,0,5.06202140130589,0,0.542621605391443,0,3.25736184293735,0.355391948742546,0,0,0,0.199945982364114,3.64871341923571,1.00451418286425,2.10833939483032,2.15662369942424,0,0,1.88215698667853,5.54786070886035,2.68591444859843,0.112085143993527,1.37921532141349,0.862510299438069,2.05348858047597,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.613457458595699,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,1.32845119707087,1.10621501125022,1.12948698808508,1.37060810223918,1.02943027143257,3.92859249633486,6.47142602455851,7.89783927745488,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0.321707842287215,0,5.70575867069826,1.9531789784444,3.53146770859379,2.07701771673448,7.20504346451747,0.120859449591622,0.200506470303285,0,0.229628896329213,3.09554985611419,1.31124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,7.96133688496276,6.29346709523108,0.863663664408557,1.54227252690289,0.541892875087706,0,0.254876273045038,0,0.223874754722178,1.09629938322967,1.3071772551245,0,0,0,0.515205058238611,0.0915694648183434,0,1.72279661398852,0,0,0.773365746336976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| ||
|short_description=p3@SH2B3 | |short_description=p3@SH2B3 | ||
}} | }} |
Latest revision as of 09:55, 16 September 2015
Short description: | p3@SH2B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH2B3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341259, NM_005475, uc001tse.2_5end |
EntrezGene: | SH2B3 |
HGNC: | 29605 |
UniProt: | Q9UQQ2Q59H48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.61e-44 | 76 |
immune system | 1.25e-43 | 93 |
hemolymphoid system | 1.33e-41 | 108 |
bone element | 3.22e-39 | 82 |
hematopoietic system | 1.12e-37 | 98 |
blood island | 1.12e-37 | 98 |
skeletal element | 1.25e-34 | 90 |
skeletal system | 2.83e-33 | 100 |
lateral plate mesoderm | 3.95e-29 | 203 |
mesoderm | 1.38e-21 | 315 |
mesoderm-derived structure | 1.38e-21 | 315 |
presumptive mesoderm | 1.38e-21 | 315 |
musculoskeletal system | 3.78e-21 | 167 |
connective tissue | 6.63e-16 | 371 |
blood vessel endothelium | 4.89e-14 | 18 |
endothelium | 4.89e-14 | 18 |
cardiovascular system endothelium | 4.89e-14 | 18 |
simple squamous epithelium | 2.10e-10 | 22 |
endothelial tube | 1.59e-08 | 9 |
arterial system endothelium | 1.59e-08 | 9 |
endothelium of artery | 1.59e-08 | 9 |
vasculature | 1.63e-08 | 78 |
vascular system | 1.63e-08 | 78 |
squamous epithelium | 1.74e-08 | 25 |
vessel | 5.48e-08 | 68 |