FFCP PHASE1:Hg19::chr12:109250453..109250467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109250453..109250467,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:109250453..109250467,+ | |description=CAGE_peak_at_chr12:109250453..109250467,+ | ||
|id=chr12:109250453..109250467,+ | |id=chr12:109250453..109250467,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.13e-39!42;CL:0000860!8.50e-37!45;CL:0000738!1.78e-34!140;CL:0000557!2.51e-30!71;CL:0000766!4.03e-30!76;CL:0002009!1.58e-28!65;CL:0000839!1.33e-27!70;CL:0002031!1.58e-26!124;CL:0002194!1.88e-26!63;CL:0000576!1.88e-26!63;CL:0000040!1.88e-26!63;CL:0000559!1.88e-26!63;CL:0002087!2.67e-25!119;CL:0000037!1.45e-24!172;CL:0000566!1.45e-24!172;CL:0000988!8.98e-22!182;CL:0002032!1.47e-21!165;CL:0000837!1.47e-21!165;CL:0000763!4.77e-21!112;CL:0000049!4.77e-21!112;CL:0000134!6.44e-21!358;CL:0002320!8.50e-20!365;CL:0000219!4.16e-18!390;CL:0000048!1.66e-16!430;CL:0000034!5.20e-16!444;CL:0000723!9.50e-16!436;CL:0000063!2.79e-10!578;CL:0000003!3.29e-10!722;CL:0002371!7.93e-10!591;CL:0000144!3.68e-09!625;CL:0000012!3.50e-08!682;CL:0000451!1.05e-07!10;CL:0000548!2.03e-07!679;CL:0000004!2.03e-07!679;CL:0000255!2.03e-07!679 | |ontology_enrichment_celltype=CL:0002057!7.13e-39!42;CL:0000860!8.50e-37!45;CL:0000738!1.78e-34!140;CL:0000557!2.51e-30!71;CL:0000766!4.03e-30!76;CL:0002009!1.58e-28!65;CL:0000839!1.33e-27!70;CL:0002031!1.58e-26!124;CL:0002194!1.88e-26!63;CL:0000576!1.88e-26!63;CL:0000040!1.88e-26!63;CL:0000559!1.88e-26!63;CL:0002087!2.67e-25!119;CL:0000037!1.45e-24!172;CL:0000566!1.45e-24!172;CL:0000988!8.98e-22!182;CL:0002032!1.47e-21!165;CL:0000837!1.47e-21!165;CL:0000763!4.77e-21!112;CL:0000049!4.77e-21!112;CL:0000134!6.44e-21!358;CL:0002320!8.50e-20!365;CL:0000219!4.16e-18!390;CL:0000048!1.66e-16!430;CL:0000034!5.20e-16!444;CL:0000723!9.50e-16!436;CL:0000063!2.79e-10!578;CL:0000003!3.29e-10!722;CL:0002371!7.93e-10!591;CL:0000144!3.68e-09!625;CL:0000012!3.50e-08!682;CL:0000451!1.05e-07!10;CL:0000548!2.03e-07!679;CL:0000004!2.03e-07!679;CL:0000255!2.03e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-81;33!CL:0002057;3.53e-81;33!CL:0000473;6.04e-56;39!CL:0000234;6.04e-56;39!CL:0000576;6.90e-47;48!CL:0000766;2.80e-28;69!CL:0002087;8.83e-19;104!CL:0000738;6.43e-13;136!CL:0000763;6.59e-13;100!CL:0000784;1.24e-10;3!CL:0000767;2.45e-10;3!CL:0000623;3.76e-10;3!CL:0000226;7.63e-10;3!CL:0000842;7.63e-10;3!CL:0002393;3.22e-09;6!CL:0002397;3.22e-09;6!CL:0001014;8.08e-08;2!CL:0001016;8.08e-08;2!CL:0000988;1.63e-07;177!CL:0000451;2.10e-07;10!CL:0000219;4.41e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.27e-88,42;CL:0002057,2.27e-88,42;CL:0000473,3.90e-76,48;CL:0000234,3.90e-76,48;CL:0002009,4.59e-68,61;CL:0002194,1.12e-62,59;CL:0000576,1.12e-62,59;CL:0000040,1.12e-62,59;CL:0000559,1.12e-62,59;CL:0000557,3.63e-61,67;CL:0000766,2.11e-59,72;CL:0000738,7.98e-58,136;CL:0000839,4.08e-55,66;CL:0002087,5.31e-51,115;CL:0002031,2.30e-46,120;CL:0000037,1.59e-44,168;CL:0000988,1.21e-41,177;CL:0000763,5.10e-41,108;CL:0000049,5.10e-41,108;CL:0002032,3.99e-37,161;CL:0000837,3.99e-37,161;CL:0000134,2.66e-21,354;CL:0002320,1.23e-20,361;CL:0000219,2.73e-18,386;CL:0000034,3.76e-17,441;CL:0000048,2.64e-16,427;CL:0000723,6.76e-16,433;CL:0000784,1.39e-10,3;CL:0000767,2.12e-10,3;CL:0000623,4.14e-10,3;CL:0000825,4.14e-10,3;CL:0000226,6.85e-10,3;CL:0000842,6.85e-10,3;CL:0001014,7.56e-08,2;CL:0001016,7.56e-08,2;CL:0000451,2.14e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.21e-65;42!CL:0000049;1.13e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-27!80;UBERON:0001474!8.45e-26!86;UBERON:0002390!5.19e-24!102;UBERON:0003061!5.19e-24!102;UBERON:0004765!4.01e-21!101;UBERON:0001434!4.01e-21!101;UBERON:0002193!3.86e-20!112;UBERON:0002405!1.41e-18!115;UBERON:0002384!2.80e-18!375;UBERON:0003081!3.75e-11!216;UBERON:0002204!4.99e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.74e-53,76;UBERON:0001474,5.65e-51,82;UBERON:0002390,5.07e-46,98;UBERON:0003061,5.07e-46,98;UBERON:0004765,1.36e-45,90;UBERON:0002405,1.83e-41,93;UBERON:0002193,7.93e-41,108;UBERON:0001434,4.57e-40,100;UBERON:0002204,2.21e-21,167;UBERON:0002384,9.97e-20,371;UBERON:0003081,3.32e-19,203;UBERON:0000926,1.30e-11,315;UBERON:0004120,1.30e-11,315;UBERON:0006603,1.30e-11,315 | |||
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|short_description=p@chr12:109250453..109250467,+ | |short_description=p@chr12:109250453..109250467,+ | ||
}} | }} |
Latest revision as of 04:41, 24 July 2015
Short description: | p@chr12:109250453..109250467, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109250453..109250467, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.74e-53 | 76 |
bone element | 5.65e-51 | 82 |
hematopoietic system | 5.07e-46 | 98 |
blood island | 5.07e-46 | 98 |
skeletal element | 1.36e-45 | 90 |
immune system | 1.83e-41 | 93 |
hemolymphoid system | 7.93e-41 | 108 |
skeletal system | 4.57e-40 | 100 |
musculoskeletal system | 2.21e-21 | 167 |
connective tissue | 9.97e-20 | 371 |
lateral plate mesoderm | 3.32e-19 | 203 |
mesoderm | 1.30e-11 | 315 |
mesoderm-derived structure | 1.30e-11 | 315 |
presumptive mesoderm | 1.30e-11 | 315 |