FFCP PHASE1:Hg19::chr12:10460438..10460485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3824 | |EntrezGene=3824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6378 | |HGNC=6378 | ||
|TSSclassifier=strong | |||
|UniProt=Q13241,Q53ZY6 | |UniProt=Q13241,Q53ZY6 | ||
|association_with_transcript=21bp_to_ENST00000336164,ENST00000350274,ENST00000381908,NM_002262,NM_007334,uc001qxx.3,uc001qxy.3,uc009zhh.2,uc009zhi.2_5end | |association_with_transcript=21bp_to_ENST00000336164,ENST00000350274,ENST00000381908,NM_002262,NM_007334,uc001qxx.3,uc001qxy.3,uc009zhh.2,uc009zhi.2_5end | ||
|cluster_id=chr12:10460438..10460485,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_KLRD1_5end | |description=CAGE_peak_1_at_KLRD1_5end | ||
|id=chr12:10460438..10460485,+ | |id=chr12:10460438..10460485,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.15e-27!140;CL:0002087!3.55e-22!119;CL:0002031!1.97e-18!124;CL:0000037!6.13e-17!172;CL:0000566!6.13e-17!172;CL:0002057!2.21e-16!42;CL:0000988!2.08e-15!182;CL:0000860!1.76e-14!45;CL:0002032!4.16e-14!165;CL:0000837!4.16e-14!165;CL:0000766!8.44e-14!76;CL:0000625!7.92e-13!11;CL:0002194!1.16e-11!63;CL:0000576!1.16e-11!63;CL:0000040!1.16e-11!63;CL:0000559!1.16e-11!63;CL:0000791!1.52e-11!18;CL:0000789!1.52e-11!18;CL:0002420!1.52e-11!18;CL:0002419!1.52e-11!18;CL:0000790!1.52e-11!18;CL:0002009!6.35e-11!65;CL:0000839!2.37e-10!70;CL:0000557!4.94e-10!71;CL:0000838!2.56e-09!52;CL:0000084!4.87e-09!25;CL:0000827!4.87e-09!25;CL:0000542!5.90e-09!53;CL:0000051!5.90e-09!53 | |ontology_enrichment_celltype=CL:0000738!9.15e-27!140;CL:0002087!3.55e-22!119;CL:0002031!1.97e-18!124;CL:0000037!6.13e-17!172;CL:0000566!6.13e-17!172;CL:0002057!2.21e-16!42;CL:0000988!2.08e-15!182;CL:0000860!1.76e-14!45;CL:0002032!4.16e-14!165;CL:0000837!4.16e-14!165;CL:0000766!8.44e-14!76;CL:0000625!7.92e-13!11;CL:0002194!1.16e-11!63;CL:0000576!1.16e-11!63;CL:0000040!1.16e-11!63;CL:0000559!1.16e-11!63;CL:0000791!1.52e-11!18;CL:0000789!1.52e-11!18;CL:0002420!1.52e-11!18;CL:0002419!1.52e-11!18;CL:0000790!1.52e-11!18;CL:0002009!6.35e-11!65;CL:0000839!2.37e-10!70;CL:0000557!4.94e-10!71;CL:0000838!2.56e-09!52;CL:0000084!4.87e-09!25;CL:0000827!4.87e-09!25;CL:0000542!5.90e-09!53;CL:0000051!5.90e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000625;7.18e-19;11!CL:0000791;3.46e-14;18!CL:0000789;3.46e-14;18!CL:0002419;3.46e-14;18!CL:0000084;4.37e-12;25!CL:0002087;1.17e-08;104!CL:0000576;9.57e-08;48!CL:0000860;1.08e-07;33!CL:0002057;1.08e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.44e-22,136;CL:0000625,7.27e-19,11;CL:0002087,9.65e-18,115;CL:0000037,1.03e-14,168;CL:0000791,3.55e-14,18;CL:0000789,3.55e-14,18;CL:0002420,3.55e-14,18;CL:0002419,3.55e-14,18;CL:0000790,3.55e-14,18;CL:0002031,2.01e-13,120;CL:0000988,3.83e-13,177;CL:0000084,4.73e-12,25;CL:0000827,4.73e-12,25;CL:0002032,2.80e-11,161;CL:0000837,2.80e-11,161;CL:0000766,2.84e-10,72;CL:0000860,6.03e-09,42;CL:0002057,6.03e-09,42;CL:0000838,1.74e-08,52;CL:0000542,3.25e-08,53;CL:0000051,3.25e-08,53;CL:0002194,6.29e-08,59;CL:0000576,6.29e-08,59;CL:0000040,6.29e-08,59;CL:0000559,6.29e-08,59;CL:0002009,1.79e-07,61;CL:0000473,3.54e-07,48;CL:0000234,3.54e-07,48;CL:0000094,9.62e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;3.46e-14;18!CL:0002057;3.86e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.67e-41!115;UBERON:0002390!1.69e-17!102;UBERON:0003061!1.69e-17!102;UBERON:0002193!4.39e-17!112;UBERON:0000178!6.52e-12!15;UBERON:0000179!6.52e-12!15;UBERON:0000463!6.52e-12!15;UBERON:0001049!2.53e-09!57;UBERON:0005068!2.53e-09!57;UBERON:0006241!2.53e-09!57;UBERON:0007135!2.53e-09!57;UBERON:0002405!1.69e-08!115;UBERON:0002371!1.39e-07!80;UBERON:0002780!4.95e-07!41;UBERON:0001890!4.95e-07!41;UBERON:0006240!4.95e-07!41;UBERON:0002616!4.99e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.56e-15;15!UBERON:0000179;8.56e-15;15!UBERON:0000463;8.56e-15;15!UBERON:0002390;9.60e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-22,114;UBERON:0002390,7.69e-16,98;UBERON:0003061,7.69e-16,98;UBERON:0002193,4.05e-15,108;UBERON:0000178,8.75e-15,15;UBERON:0000179,8.75e-15,15;UBERON:0000463,8.75e-15,15;UBERON:0002405,1.97e-07,93;UBERON:0004177,2.38e-07,7;UBERON:0005057,2.38e-07,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.534893840235659,0.0821005894499457,0.157421562627358,78.6728553697808,265.993772881368,36.2269728559618,0,0,0,0.0774672005803016,0,0,41.5496556398908,28.6778559882303,32.9856523488095,7.83704159839735,32.065472935879,10.3030227053675,1.30858414901608,0.755751887377619,0.242584061187816,1.85943229524548,0.822335776043652,0.309706370895104,1.1507695692886,1.5369642391746,1.18241114944293,2.75796544589295,2.5819387343353,0,2.63539275359647,1.09162460023138,0.449446968890169,3.36692281607993,2.56743221660875,0.639337125799041,0.329851300186716,0.598390972864896,0,4.35313857942876,1.13477044938228,0.622822248995575,4.01997864410789,2.60741459210101,0.65156653411535,6.65939452896706,3.68277635987565,1.58231193720442,0.422510572623884,0.425208599930087,0.209658645508376,0,0,0,0.570025487482497,0.99458338599545,0,0,0,0.889509253863555,0,0.800791974072025,0.574752439954483,0,0,1.70763890732835,0,1.91136614062614,0,36.4330565937998,0,0,0,0,0,0.651844533267181,0,0,0.222820913770347,0.883817722424512,0,0.541607727530031,0,0.910415432919148,1.80881695064044,2.48715016007264,1.15921234294021,0.593146252648242,0,0,0.679856056185397,2.29932296161153,0.34362744548263,4.30133476433155,138.257389816658,225.274875034321,334.559119645828,193.940753372171,231.14381974488,263.60383302545,218.07184913254,275.899006965472,139.71347305474,136.394499849589,55.7573954948776,0,0,0,0,0,0,1.5905718941022,0,0,0,1.14185221401064,4.25681995367566,0,0,0,0.174129737299267,0,4.5313218618015,9.72391348326217,6.3147775226026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,5.89696330006576,4.72631925345123,1.7658523976586,0,0,0,0,0,0,0,0,1.44331342025273,0,0,0.144366447761074,0,0.380508304469197,0,0,0.738651018262192,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.7395050453009,276.434156563304,197.083603421599,202.653654285723,0,0,0,0,0,1.49801404789436,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.4402166466757,58.2428342210265,67.6652716473837,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0.767039646744908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,2.11107635297664,0,0,0,0,0.670302275535787,0,4.33061483573184,0,0,0,0,71.0426652925037,56.5831533285358,63.8004849635062,112.207166240619,93.3792359905661,46.0416050946829,86.9450613953365,73.7606413953671,0,0,0,0,0,3.27252479402705,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,0.23874448473769,0.890894042497916,0,0,0.140669416410513,0,0,0,3.38721580026819,8.28851746593443,0,0,0,0,0,0,0,6.90503839458535,76.6345895510207,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,1.76985594558733,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,3.27292988662355,2.4441205797345,0,0.123563938946503,0.104421949505455,0.876214728748802,0,0,0,0,0,0.394584402849391,1.20990716048664,0,3.79119477770928,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,2.23074737923365,0,0.451961481561065,0,0,0.189932387867636,0,0.240476460754601,1.92107695265417,0.39961921916426,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,1.11712960508902,0,1.43574604915363,0,0.858452096273142,1.33902874465124,0.604651252380536,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0.242998226632099,0,1.33969702408637,0.577000469484979,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,2.93104467356165,0,0.387848869084652,1.19009341568421,0,0,16.7656237731281,9.74666691617929,12.0129326050687,10.419486458051,0,0,0,0.544017803369474,1.0027595760908,0.612691153526923,0.327872630709804,0,0,0.488105059607853,1.1267183763585,0,1.10929051536852,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,1.16916185303633,0.132864840313363,0.163565394255844,0,0,0,2.39984875025916,0,0,0,0,0,4.97661808026378,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.321146125482298,0,0.638535436228605,0.205116364240755,0,0.138314504928436,0.968853873791107,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.380494861163441,0,1.09651553371436,2.48105589194647,0,0.127762427639595,0.535701835878287,0.336283722218824,28.5273833991217,46.2154248443134,2.21755925406597,2.65038171378292,40.8141462461056,0.543757863814654,0.0657727735628491,0,0.111231401892069,2.27629969266491,0.314231179832004,0,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| 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| ||
|short_description=p1@KLRD1 | |short_description=p1@KLRD1 | ||
}} | }} |
Latest revision as of 23:42, 15 September 2015
Short description: | p1@KLRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLRD1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 21bp_to_ENST00000336164, ENST00000350274, ENST00000381908, NM_002262, NM_007334, uc001qxx.3, uc001qxy.3, uc009zhh.2, uc009zhi.2_5end |
EntrezGene: | KLRD1 |
HGNC: | 6378 |
UniProt: | Q13241Q53ZY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.44e-22 | 136 |
CD8-positive, alpha-beta T cell | 7.27e-19 | 11 |
nongranular leukocyte | 9.65e-18 | 115 |
hematopoietic stem cell | 1.03e-14 | 168 |
mature alpha-beta T cell | 3.55e-14 | 18 |
alpha-beta T cell | 3.55e-14 | 18 |
immature T cell | 3.55e-14 | 18 |
mature T cell | 3.55e-14 | 18 |
immature alpha-beta T cell | 3.55e-14 | 18 |
hematopoietic lineage restricted progenitor cell | 2.01e-13 | 120 |
hematopoietic cell | 3.83e-13 | 177 |
T cell | 4.73e-12 | 25 |
pro-T cell | 4.73e-12 | 25 |
hematopoietic oligopotent progenitor cell | 2.80e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-11 | 161 |
myeloid leukocyte | 2.84e-10 | 72 |
classical monocyte | 6.03e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.03e-09 | 42 |
lymphoid lineage restricted progenitor cell | 1.74e-08 | 52 |
lymphocyte | 3.25e-08 | 53 |
common lymphoid progenitor | 3.25e-08 | 53 |
monopoietic cell | 6.29e-08 | 59 |
monocyte | 6.29e-08 | 59 |
monoblast | 6.29e-08 | 59 |
promonocyte | 6.29e-08 | 59 |
macrophage dendritic cell progenitor | 1.79e-07 | 61 |
defensive cell | 3.54e-07 | 48 |
phagocyte | 3.54e-07 | 48 |
granulocyte | 9.62e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-22 | 114 |
hematopoietic system | 7.69e-16 | 98 |
blood island | 7.69e-16 | 98 |
hemolymphoid system | 4.05e-15 | 108 |
blood | 8.75e-15 | 15 |
haemolymphatic fluid | 8.75e-15 | 15 |
organism substance | 8.75e-15 | 15 |
immune system | 1.97e-07 | 93 |
hemopoietic organ | 2.38e-07 | 7 |
immune organ | 2.38e-07 | 7 |